G347723


Basic Information

Item Value
gene id G347723
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047618.1
NCBI id CM018564.1
chromosome length 20251756
location 395367 ~ 397450 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU411979
CCGTCCCACAAGCGGCCAGTGTGGGGCAGCACAGGGGGGTCAGAGCATCGGATCTCTGTAGAAacacagagagagagagagagagagagagctggccAGAGTTATGGCATGTATACATGCAGCCCTGTGTTTAAACACTAATCTGTTTTCAATGCGCTGATACTGATCACAAGCAGTGATTCTGTTCCACTGTCCCATTCTGTCACAGGCACCTGTCTCCTTGTTCTAGTGTGAGTCTTGAGTACTGATCTTGTAGCAGTATCAGTTCCAGTGCTGTGTACTGATCCTGCCCCACCATCAGTCTTAGGCACTGGTCCTGTCTCAGTCACAAGCAACAATTCTGTCCAAGTGTCAGACTCGGCCACTGATCTTGTCCCAGTCACAGTCTCAGGTACTGATCTTGTCCTAGTGTCAGTCTCAGGTACTGATCTTGTCCTAGTGTCAGTCTCAGGTACTGATCTTGTCCAAGTGTCAGTCTCAGGTACTGATCTTGTCCCAGTTTCTGTCTCGAGTACTGATCTTGTCCAAGTGTCAGTCTCAGGTACTGATCTTGTCCAAGTGTCAGTCTCAGGTACTGATCTTGTCCAAGTGTCAGTCTCGAGTACTGATCTTGTCCTAGTGTCAGTCTCAGGTACTGATCTTGTCCTAGTGTCAGTCTCGAGTACTG

Function

GO:

id name namespace
GO:0015103 inorganic anion transmembrane transporter activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU411979 True 667 lncRNA 0.49 2 395367 397450

Neighbor

gene id symbol gene type direction distance location
lrp13 LOC108255551 coding downstream 9967 373450 ~ 385400 (-)
adamts12 adamts12 coding downstream 112961 261639 ~ 282406 (-)
fgf10b NA coding downstream 135144 257527 ~ 260223 (-)
mybbp1a mybbp1a coding downstream 140823 238817 ~ 254544 (-)
LOC113528265 NA coding downstream 168663 221429 ~ 226704 (-)
atp8b5a LOC108255417 coding upstream 42886 440336 ~ 469953 (-)
LOC113528156 LOC108255548 coding upstream 78044 475494 ~ 516272 (-)
LOC113528517 LOC108255548 coding upstream 126357 523807 ~ 577436 (-)
pgam5 pgam5 coding upstream 255539 652989 ~ 658898 (-)
LOC113528030 LOC108255642 coding upstream 440111 837561 ~ 844476 (-)
G347672 NA non-coding downstream 40027 354327 ~ 355340 (-)
G347704 NA non-coding downstream 61612 333242 ~ 333755 (-)
G347703 NA non-coding downstream 65759 328914 ~ 329608 (-)
G347623 NA non-coding downstream 189074 175023 ~ 206293 (-)
G347652 NA non-coding downstream 256554 120309 ~ 138813 (-)
G347753 NA non-coding upstream 130498 527948 ~ 619562 (-)
G347759 NA non-coding upstream 237309 634759 ~ 638280 (-)
G347821 NA non-coding upstream 245536 642986 ~ 643487 (-)
G347833 NA non-coding upstream 275627 673077 ~ 676630 (-)
G347847 ier3 non-coding upstream 311104 708554 ~ 715445 (-)
LOC113528009 atp5i,atp5ib,atp5ia,LOC107703581 other downstream 27628 364006 ~ 367739 (-)
LOC117595925 NA other downstream 158095 230525 ~ 237272 (-)
LOC113528266 NA other downstream 184662 205480 ~ 210705 (-)
LOC117595911 LOC108255570 other downstream 193377 192549 ~ 201990 (-)
LOC117595978 NA other downstream 245561 118198 ~ 149806 (-)
rusc2 rusc2,LOC108255549 other upstream 20857 418307 ~ 466255 (-)
LOC113527995 LOC108255428 other upstream 459330 856780 ~ 924667 (-)
G347896 LOC108255572,LOC108255614,LOC108255576,LOC108255575,LOC108255573 other upstream 521934 919384 ~ 1701550 (-)
G347960 NA other upstream 679283 1076733 ~ 1079139 (-)
LOC113524981 LOC108255436,LOC108255434,LOC108255578,LOC108255576,LOC108255614,LOC108255573 other upstream 870859 1268309 ~ 1278867 (-)

Expression


Co-expression Network