Gene
RNA
| Item | Value |
|---|---|
| gene id | G347866 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047618.1 |
| NCBI id | CM018564.1 |
| chromosome length | 20251756 |
| location | 763323 ~ 765368 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU412173 | True | 240 | lncRNA | 0.38 | 2 | 763323 | 765368 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| pgam5 | pgam5 | coding | downstream | 104425 | 652989 ~ 658898 (-) |
| LOC113528517 | LOC108255548 | coding | downstream | 185887 | 523807 ~ 577436 (-) |
| LOC113528156 | LOC108255548 | coding | downstream | 247051 | 475494 ~ 516272 (-) |
| atp8b5a | LOC108255417 | coding | downstream | 293370 | 440336 ~ 469953 (-) |
| lrp13 | LOC108255551 | coding | downstream | 377923 | 373450 ~ 385400 (-) |
| LOC113528030 | LOC108255642 | coding | upstream | 72193 | 837561 ~ 844476 (-) |
| tal2 | LOC108255450 | coding | upstream | 84018 | 849386 ~ 851691 (-) |
| LOC113524993 | NA | coding | upstream | 161741 | 927109 ~ 1240090 (-) |
| foxn4 | foxn4,LOC107654613 | coding | upstream | 211580 | 976948 ~ 980689 (-) |
| kctd10 | kctd10,LOC107595924,LOC107597295,LOC107752136,LOC107672630 | coding | upstream | 240272 | 1005640 ~ 1009594 (-) |
| G347864 | NA | non-coding | downstream | 5987 | 757033 ~ 757336 (-) |
| G347859 | NA | non-coding | downstream | 16388 | 742817 ~ 746935 (-) |
| G347847 | ier3 | non-coding | downstream | 47878 | 708554 ~ 715445 (-) |
| G347833 | NA | non-coding | downstream | 86693 | 673077 ~ 676630 (-) |
| G347821 | NA | non-coding | downstream | 119836 | 642986 ~ 643487 (-) |
| G347868 | NA | non-coding | upstream | 697 | 766065 ~ 766596 (-) |
| G347773 | NA | non-coding | upstream | 45213 | 810581 ~ 852436 (-) |
| LOC117595935 | NA | non-coding | upstream | 61296 | 826664 ~ 829841 (-) |
| LOC117595934 | NA | non-coding | upstream | 65442 | 830810 ~ 837338 (-) |
| G347758 | NA | non-coding | upstream | 65615 | 830983 ~ 832930 (-) |
| rusc2 | rusc2,LOC108255549 | other | downstream | 297068 | 418307 ~ 466255 (-) |
| LOC113528009 | atp5i,atp5ib,atp5ia,LOC107703581 | other | downstream | 395584 | 364006 ~ 367739 (-) |
| LOC117595925 | NA | other | downstream | 526051 | 230525 ~ 237272 (-) |
| LOC113528266 | NA | other | downstream | 552618 | 205480 ~ 210705 (-) |
| LOC117595911 | LOC108255570 | other | downstream | 561333 | 192549 ~ 201990 (-) |
| LOC113527995 | LOC108255428 | other | upstream | 91412 | 856780 ~ 924667 (-) |
| G347896 | LOC108255572,LOC108255614,LOC108255576,LOC108255575,LOC108255573 | other | upstream | 154016 | 919384 ~ 1701550 (-) |
| G347960 | NA | other | upstream | 311365 | 1076733 ~ 1079139 (-) |
| LOC113524981 | LOC108255436,LOC108255434,LOC108255578,LOC108255576,LOC108255614,LOC108255573 | other | upstream | 502941 | 1268309 ~ 1278867 (-) |
| LOC113524988 | NA | other | upstream | 591200 | 1356568 ~ 1369462 (-) |
