Gene
RNA
| Item | Value |
|---|---|
| gene id | G347969 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047618.1 |
| NCBI id | CM018564.1 |
| chromosome length | 20251756 |
| location | 1095034 ~ 1277213 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU412335 | True | 600 | lncRNA | 0.36 | 2 | 1095034 | 1277213 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| kctd10 | kctd10,LOC107595924,LOC107597295,LOC107752136,LOC107672630 | coding | downstream | 85440 | 1005640 ~ 1009594 (-) |
| foxn4 | foxn4,LOC107654613 | coding | downstream | 114345 | 976948 ~ 980689 (-) |
| tal2 | LOC108255450 | coding | downstream | 243343 | 849386 ~ 851691 (-) |
| LOC113528030 | LOC108255642 | coding | downstream | 250558 | 837561 ~ 844476 (-) |
| pgam5 | pgam5 | coding | downstream | 436136 | 652989 ~ 658898 (-) |
| LOC117595981 | NA | coding | upstream | 16661 | 1293874 ~ 1297808 (-) |
| LOC113528146 | NA | coding | upstream | 37286 | 1314499 ~ 1316387 (-) |
| LOC113524983 | NA | coding | upstream | 73103 | 1350316 ~ 1420706 (-) |
| LOC113524989 | NA | coding | upstream | 147886 | 1425099 ~ 1431481 (-) |
| LOC113528310 | NA | coding | upstream | 155793 | 1433006 ~ 1442192 (-) |
| G347955 | NA | non-coding | downstream | 56837 | 1036539 ~ 1038197 (-) |
| G347773 | NA | non-coding | downstream | 242598 | 810581 ~ 852436 (-) |
| LOC117595965 | NA | non-coding | upstream | 32476 | 1309689 ~ 1311494 (-) |
| LOC113524984 | NA | non-coding | upstream | 61595 | 1338808 ~ 1339841 (-) |
| G348011 | NA | non-coding | upstream | 124643 | 1401856 ~ 1402831 (-) |
| G348012 | NA | non-coding | upstream | 131748 | 1408961 ~ 1463632 (-) |
| G347916 | LOC108255589,LOC108255412 | non-coding | upstream | 219197 | 1496410 ~ 1496871 (-) |
| G347960 | NA | other | downstream | 15895 | 1076733 ~ 1079139 (-) |
| LOC113527995 | LOC108255428 | other | downstream | 170367 | 856780 ~ 924667 (-) |
| rusc2 | rusc2,LOC108255549 | other | downstream | 628779 | 418307 ~ 466255 (-) |
| LOC113528009 | atp5i,atp5ib,atp5ia,LOC107703581 | other | downstream | 727295 | 364006 ~ 367739 (-) |
| LOC117595925 | NA | other | downstream | 857762 | 230525 ~ 237272 (-) |
| LOC113524988 | NA | other | upstream | 79355 | 1356568 ~ 1369462 (-) |
| LOC117595719 | NA | other | upstream | 173122 | 1450335 ~ 1710908 (-) |
| LOC113542373 | NA | other | upstream | 228426 | 1505639 ~ 1530394 (-) |
| G348096 | LOC108255538 | other | upstream | 550685 | 1827898 ~ 1828645 (-) |
| arvcfb | arvcf,arvcfb,LOC107673389,LOC107595013 | other | upstream | 704841 | 1982054 ~ 2127645 (-) |
