G350867


Basic Information

Item Value
gene id G350867
gene name NA
gene type unknown
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047618.1
NCBI id CM018564.1
chromosome length 20251756
location 6764914 ~ 6775149 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU415778
GTGTGAACAGGGAATGAAGCTGCCTTGATCCAAATGCGTCACTCAGGAAAGAGACTCCACtcaaaatggttttattttgcttttatttcagGTTCTCTATCAGATCCGGAGCGAGGATACTGTCACAGTGCCGATCAGCTTTCCAACGGGTTCATGATCCCAGAGCGGCAGTTTGGAggtGTGAAGCCACCCCATACTTCAGCCCCACCGCATGGAGGAAATGAGGGGGAAAATGATGATCTTCCTTCCAGgcctgcatttttttcccctccaccGCTTTTCCCTCTTTCCTCGGAAGGGATTGTCTGCCAAGAAACAGGCTCTCCAGCCAGGATGACAGAAAATCGAGGCTGTGGTCGGTGAAATCCTCCTGTGCATTGGGGCCTCTGTCTCTAAACACAGGGTCAGGTGTCAGCCCTGAGCTGCCTGCCAGAACATagtatgctttaaaaaaaaaatcggccTGCCATTGTTTCTCTGTCAGTGTCAATCCAATTATGTCGCACGCAAAGCGCTGGCAAAACAAGCAGAGAGGTATCGATCCAAGCCGGCCCTCACCTGTGGTTAAACTTGTGGGCTTGAGAGAGGATTGAGAGGTTAGTGTGTACATCATATTGAATGGCTTAGAGGACTGCTGAGAGTTACACTGAATGCATgcttaataaataatgtgtaatttatcattaaaaac

Function

GO: NA

KEGG:

id description
ko04640 Hematopoietic cell lineage
ko05150 Staphylococcus aureus infection

RNA

RNA id representative length rna type GC content exon number start site end site
TU415778 True 691 TUCP 0.48 2 6764914 6775149

Neighbor

gene id symbol gene type direction distance location
LOC113537041 LOC108255977 coding downstream 211030 6537239 ~ 6553884 (-)
LOC113537042 LOC108255977 coding downstream 227629 6534776 ~ 6537285 (-)
LOC113542264 LOC107549184 coding downstream 249305 6508430 ~ 6515609 (-)
LOC117595918 NA coding downstream 249988 6512434 ~ 6514926 (-)
krt1-c5 LOC108255341,LOC108423676,LOC107740828,LOC106585415,LOC105014123 coding downstream 272056 6488487 ~ 6492858 (-)
fam172a fam172a,LOC107756291 coding upstream 162136 6937285 ~ 7104859 (-)
kiaa0825 kiaa0825 coding upstream 331003 7106152 ~ 7226684 (-)
mctp1a mctp1,LOC107756292,LOC107703246,LOC107720291 coding upstream 493017 7268166 ~ 7374405 (-)
zgc:194908 mctp1 coding upstream 635758 7410907 ~ 7412377 (-)
ttc37 ttc37,LOC107735852 coding upstream 654168 7429317 ~ 7454498 (-)
G350714 NA non-coding downstream 22312 6742393 ~ 6742602 (-)
G350664 NA non-coding downstream 69851 6694855 ~ 6695063 (-)
LOC117595904 NA non-coding downstream 376343 6383104 ~ 6388571 (-)
G350513 NA non-coding downstream 454464 6309132 ~ 6310450 (-)
LOC117595975 NA non-coding downstream 823082 5938466 ~ 5941832 (-)
LOC113537000 NA non-coding upstream 127144 6902293 ~ 6914343 (-)
G350906 NA non-coding upstream 312565 7087714 ~ 7088036 (-)
G351033 NA non-coding upstream 425597 7200746 ~ 7201552 (-)
G351266 NA non-coding upstream 691447 7466596 ~ 7466953 (-)
G351308 NA non-coding upstream 762889 7538038 ~ 7538341 (-)
LOC113542569 NA other downstream 412542 6346663 ~ 6352372 (-)
pappab LOC108255326,LOC108423596 other downstream 643955 6056981 ~ 6120959 (-)
LOC117595919 NA other downstream 1185933 5575788 ~ 5578981 (-)
LOC113542328 hectd4 other downstream 1241633 5362282 ~ 5523281 (-)
G349951 NA other downstream 1400632 5321513 ~ 5364282 (-)
ccdc180 ccdc180 other upstream 810323 7585472 ~ 7597962 (-)
card9 card9 other upstream 827758 7602907 ~ 7607466 (-)
hint2 hint2,LOC102299676,LOC102195764,LOC102781852,LOC104963271 other upstream 1778498 8553647 ~ 8556676 (-)
malt1 malt1 other upstream 1795368 8570517 ~ 8586011 (-)
sh2d3cb sh2d3c other upstream 1865793 8640942 ~ 8654612 (-)

Expression


Co-expression Network