G350906


Basic Information

Item Value
gene id G350906
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047618.1
NCBI id CM018564.1
chromosome length 20251756
location 7087714 ~ 7088036 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU415818
TAGAGCTCtgttttctgtgtgtgttttggtaaGTTGTTTTGTATGTATAATGTGTTCTATGTAtataggtgtttgtgtgtgcatgcacttgCTTTATTATCTGTATATATGACCTTGACTTCATGACACCTTTAATTGTGGTGTGTTTTTCAAAAGTGTACGTGAGGTAcggtttgtgtatgtgtatgttcacGTTCCTTGAGTCAGACGG

Function

NR:

description
unnamed protein product

GO:

id name namespace
GO:0007498 mesoderm development biological_process
GO:0005496 steroid binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU415818 True 211 lncRNA 0.37 2 7087714 7088036

Neighbor

gene id symbol gene type direction distance location
LOC113537041 LOC108255977 coding downstream 533830 6537239 ~ 6553884 (-)
LOC113537042 LOC108255977 coding downstream 550429 6534776 ~ 6537285 (-)
LOC113542264 LOC107549184 coding downstream 572105 6508430 ~ 6515609 (-)
LOC117595918 NA coding downstream 572788 6512434 ~ 6514926 (-)
krt1-c5 LOC108255341,LOC108423676,LOC107740828,LOC106585415,LOC105014123 coding downstream 594856 6488487 ~ 6492858 (-)
kiaa0825 kiaa0825 coding upstream 18116 7106152 ~ 7226684 (-)
mctp1a mctp1,LOC107756292,LOC107703246,LOC107720291 coding upstream 180130 7268166 ~ 7374405 (-)
zgc:194908 mctp1 coding upstream 322871 7410907 ~ 7412377 (-)
ttc37 ttc37,LOC107735852 coding upstream 341281 7429317 ~ 7454498 (-)
hmgcra hmgcr,hmgcra,LOC107699716,LOC107587518,LOC107720287 coding upstream 421881 7509917 ~ 7518413 (-)
LOC113537000 NA non-coding downstream 173371 6902293 ~ 6914343 (-)
G350714 NA non-coding downstream 345112 6742393 ~ 6742602 (-)
G350664 NA non-coding downstream 392651 6694855 ~ 6695063 (-)
LOC117595904 NA non-coding downstream 699143 6383104 ~ 6388571 (-)
G350513 NA non-coding downstream 777264 6309132 ~ 6310450 (-)
G351033 NA non-coding upstream 112710 7200746 ~ 7201552 (-)
G351266 NA non-coding upstream 378560 7466596 ~ 7466953 (-)
G351308 NA non-coding upstream 450002 7538038 ~ 7538341 (-)
G351362 NA non-coding upstream 460550 7548586 ~ 7642268 (-)
G351384 NA non-coding upstream 547066 7635102 ~ 7636193 (-)
G350867 NA other downstream 312565 6764914 ~ 6775149 (-)
LOC113542569 NA other downstream 735342 6346663 ~ 6352372 (-)
pappab LOC108255326,LOC108423596 other downstream 966755 6056981 ~ 6120959 (-)
LOC117595919 NA other downstream 1508733 5575788 ~ 5578981 (-)
LOC113542328 hectd4 other downstream 1564433 5362282 ~ 5523281 (-)
ccdc180 ccdc180 other upstream 497436 7585472 ~ 7597962 (-)
card9 card9 other upstream 514871 7602907 ~ 7607466 (-)
hint2 hint2,LOC102299676,LOC102195764,LOC102781852,LOC104963271 other upstream 1465611 8553647 ~ 8556676 (-)
malt1 malt1 other upstream 1482481 8570517 ~ 8586011 (-)
sh2d3cb sh2d3c other upstream 1552906 8640942 ~ 8654612 (-)

Expression


Co-expression Network