G355413


Basic Information

Item Value
gene id G355413
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047618.1
NCBI id CM018564.1
chromosome length 20251756
location 14731311 ~ 14745946 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU421054
TTCTCAGACGTGAGGTATGTCCCCGCTGTAGCCTCTTCGTAATTGCAGAGTCGGAGTCTCTTGTGTCTAGATTTACGTCTTCCTTCTGTATTCCATCCCTCACTTTCCTGTCTCTTTGTTCTCTAACATTTACTTTCTCCTCCTCATGCAACACCACTTCATGTGGCTCTGAACCAGGCTGTGTGATTGGATATGTGTGACAAAGTGTGAAtatgtgttagagagagagagggaaagcaGAATGCTGGTCGAATGCTCACcagtggagagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU421054 True 307 lncRNA 0.47 2 14731311 14745946

Neighbor

gene id symbol gene type direction distance location
cfap77 cfap77 coding downstream 8613 14705927 ~ 14722698 (-)
barhl1a LOC108256006,LOC100049373 coding downstream 26234 14701210 ~ 14705077 (-)
spaca9 NA coding downstream 79268 14647609 ~ 14652043 (-)
grin1b grin1,grin1b,LOC107681230,LOC107709703,LOC107757976,LOC107597863,LOC105891600 coding downstream 106267 14595957 ~ 14625044 (-)
LOC113536885 entpd2 coding downstream 145307 14568937 ~ 14586004 (-)
LOC113537011 H2AFV,LOC106584895,LOC107386217,LOC105007341,LOC107668744 coding upstream 27184 14773130 ~ 14777805 (-)
LOC113537164 NA coding upstream 56572 14802518 ~ 14805253 (-)
ckap2l LOC108255521 coding upstream 61927 14807873 ~ 14825591 (-)
LOC113537027 cnnm4,LOC108431740,LOC100150651,LOC107599606,LOC107668749 coding upstream 83259 14829205 ~ 14862572 (-)
sec14l8 sec14l8,LOC108255515,LOC108431737,LOC107755846,LOC107599607,LOC107668747,LOC108431738 coding upstream 120218 14866164 ~ 14886061 (-)
G355377 LOC108255875 non-coding downstream 24390 14629776 ~ 14706921 (-)
G355375 NA non-coding downstream 133865 14597153 ~ 14597446 (-)
G354930 NA non-coding downstream 555105 14175918 ~ 14176206 (-)
G354893 trafd1 non-coding downstream 649915 14067786 ~ 14081396 (-)
G354722 NA non-coding downstream 979489 13749877 ~ 13751822 (-)
G355434 purb,purba,LOC108425219 non-coding upstream 32874 14778820 ~ 14781523 (-)
G355456 NA non-coding upstream 61105 14807051 ~ 14807352 (-)
G355724 NA non-coding upstream 202008 14947954 ~ 14949438 (-)
G355732 NA non-coding upstream 203589 14949535 ~ 15026316 (-)
G355725 NA non-coding upstream 207270 14953216 ~ 14954814 (-)
mrpl41 mrpl41 other downstream 1006453 13722105 ~ 13724858 (-)
LOC113536823 NA other downstream 3982473 10731527 ~ 10748838 (-)
LOC113536921 LOC108255872 other downstream 4214106 10509071 ~ 10517205 (-)
iqgap2 iqgap2,LOC107748460,LOC107565681,LOC107700055,LOC107561620,LOC107685248 other downstream 4319625 10370162 ~ 10411686 (-)
LOC113536891 NA other downstream 4916895 9775966 ~ 9814416 (-)
ccl19a.2 NA other upstream 162850 14908796 ~ 14924659 (-)
spring1 c22h12orf49,c21h12orf49,zgc:110063,clg12h12orf49,LOC104923683,LOC103134957 other upstream 834524 15580470 ~ 15589491 (-)
selenoe LOC108255849,LOC100703742,LOC101466006,LOC102210357 other upstream 1087107 15833053 ~ 15841684 (-)
G356331 NA other upstream 1393843 16139789 ~ 16140270 (-)
rabl6b rabl6,rabl6b,LOC108435365 other upstream 1668743 16414689 ~ 16442957 (-)

Expression


Co-expression Network