Gene
RNA
| Item | Value |
|---|---|
| gene id | tal2 |
| gene name | LOC108255450 |
| gene type | coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047618.1 |
| NCBI id | CM018564.1 |
| chromosome length | 20251756 |
| location | 849386 ~ 851691 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| description |
|---|
| T-cell acute lymphocytic leukemia protein 2 |
| id | name | namespace |
|---|---|---|
| GO:0007420 | brain development | biological_process |
| GO:0021514 | ventral spinal cord interneuron differentiation | biological_process |
| GO:0046983 | protein dimerization activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_026916212.2 | True | 1367 | mRNA | 0.45 | 2 | 849386 | 851691 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC113528030 | LOC108255642 | coding | downstream | 4910 | 837561 ~ 844476 (-) |
| pgam5 | pgam5 | coding | downstream | 190488 | 652989 ~ 658898 (-) |
| LOC113528517 | LOC108255548 | coding | downstream | 271950 | 523807 ~ 577436 (-) |
| LOC113528156 | LOC108255548 | coding | downstream | 333114 | 475494 ~ 516272 (-) |
| atp8b5a | LOC108255417 | coding | downstream | 379433 | 440336 ~ 469953 (-) |
| LOC113524993 | NA | coding | upstream | 75418 | 927109 ~ 1240090 (-) |
| foxn4 | foxn4,LOC107654613 | coding | upstream | 125257 | 976948 ~ 980689 (-) |
| kctd10 | kctd10,LOC107595924,LOC107597295,LOC107752136,LOC107672630 | coding | upstream | 153949 | 1005640 ~ 1009594 (-) |
| LOC117595672 | mmab | coding | upstream | 234651 | 1086342 ~ 1108648 (-) |
| tchp | tchp | coding | upstream | 337233 | 1188924 ~ 1230648 (-) |
| LOC117595934 | NA | non-coding | downstream | 12048 | 830810 ~ 837338 (-) |
| G347758 | NA | non-coding | downstream | 16456 | 830983 ~ 832930 (-) |
| LOC117595935 | NA | non-coding | downstream | 19545 | 826664 ~ 829841 (-) |
| G347868 | NA | non-coding | downstream | 82790 | 766065 ~ 766596 (-) |
| G347866 | NA | non-coding | downstream | 84018 | 763323 ~ 765368 (-) |
| G347955 | NA | non-coding | upstream | 184848 | 1036539 ~ 1038197 (-) |
| G347959 | NA | non-coding | upstream | 218027 | 1069718 ~ 1464481 (-) |
| G347963 | NA | non-coding | upstream | 232061 | 1083752 ~ 1102884 (-) |
| G347969 | NA | non-coding | upstream | 243343 | 1095034 ~ 1277213 (-) |
| G347980 | fam222a | non-coding | upstream | 322426 | 1174117 ~ 1177170 (-) |
| rusc2 | rusc2,LOC108255549 | other | downstream | 383131 | 418307 ~ 466255 (-) |
| LOC113528009 | atp5i,atp5ib,atp5ia,LOC107703581 | other | downstream | 481647 | 364006 ~ 367739 (-) |
| LOC117595925 | NA | other | downstream | 612114 | 230525 ~ 237272 (-) |
| LOC113528266 | NA | other | downstream | 638681 | 205480 ~ 210705 (-) |
| LOC117595911 | LOC108255570 | other | downstream | 647396 | 192549 ~ 201990 (-) |
| LOC113527995 | LOC108255428 | other | upstream | 5089 | 856780 ~ 924667 (-) |
| G347896 | LOC108255572,LOC108255614,LOC108255576,LOC108255575,LOC108255573 | other | upstream | 67693 | 919384 ~ 1701550 (-) |
| G347960 | NA | other | upstream | 225042 | 1076733 ~ 1079139 (-) |
| LOC113524981 | LOC108255436,LOC108255434,LOC108255578,LOC108255576,LOC108255614,LOC108255573 | other | upstream | 416618 | 1268309 ~ 1278867 (-) |
| LOC113524988 | NA | other | upstream | 504877 | 1356568 ~ 1369462 (-) |
