ydjc (ydjc)


Basic Information

Item Value
gene id ydjc
gene name ydjc
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047618.1
NCBI id CM018564.1
chromosome length 20251756
location 14931813 ~ 14937772 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026931126.2
tgtAGAGTATATTAAGAGTCTATGGATTGGCATCGAGCTAAACTGGTTTGAATGGTTCTTGGAATAAACATGTATTAATAGATCCAAAGCAATAATGTGTCTTTGTAACGAAATGTAGATGAGTGAAGCCTGGGTAAGGCATCCAGGGGTGCGTTCAATGTAACAGGCGTGTTAATTAGTTgttcactgccattagggattGGGTGCTCTATTTCCTGGAAGAATAGTTCACTGGAAGATGATATCCTAGTGTAATCCAAAGCCGAACACACTGTCATTTCACTAGCAGCATAGAAATGAATTATTCAGGAGGTTGGAGGTTACAGGCTACTATAAATGCATCGGCATCAGGGTTGACTGCTGCGGTTCCGCCTCATCCTGACTCACAGGCAGAGAGCCACGTGAAAATGTAGGCTAAGCCGGGCAGTGTTGCTAAACTGGCGACATTTACCGCTCCTGTTCAGCTTGCTATAGTCATGACCCGGTGTTTGAGGAAATTAATTCAACCTTTGTATCCGCTTAAAGGAAATTAGTCACCCTAGAACATGGTCATAAGTTGATGGGTGAGAAACAGCACTTGATGTATGTGCCGTCAGAGCCAGGTATTGAACATGCCTCAGCCCAGAGTCAAGCTGGTGGTGACCGGGGATGATTTTGGGTACTGCGCGCGGAGGAACCGGGGCGTCGCCGAGGCTTTCCTGGCCGGTGGCATCTCCAACGCGTCTGTGCTGGTGAACGGAGCTTCTGCGGAACATGCGGCCCAGCTAGCCAAGAGACATTGCATTCCCATTGGACTCCATGCAAACCTGTCTGAAGGTGCTCCGGTGTGCCAGGAGCTGAGAAGGTCCACGCTCCTTAATAAAGATGGCTTCTTTCATGGGAAGATGGGTTTCCGTGAAGTTCTGCGGAGTGGAAAAATGAGCATGATGGATGTGGAGGTGGAGCTTAGGGCCCAGGTGAAGCATTTTTGCGAGCTCACTGGTCACCTGCCCAATCACATGGATGGCCATCAACATGTGCACGTGCTGCCAGaggTGCGAGAAGTGTTTGCGCGGGTTCTCTCTGATTTTGGCATCCCTTACACACGTGTCCCAGTGGAGCCTGGTTTGCACTCTTGTCATTTCCTACCTCCAAACCTCAGAGAATTCTACCTGCAGGTTGAGAAAGATGCACTCCAGTCTGTGGAAGTCTTCCATCGCCATGGTATCAGATGGCCAGATGTATACTTGGGCCTCAGCACGATGGGGCAGAACATGTCCTTTTCCAACCTCAAAAGAGTCCTGAACTTTGCTCTGGAGGCACGGACATCTATAGCCGCCCAGGCTGATGGCCTTTGTGCATCTGAATCgtatcagccaatcacagcagaGCTGATGGTACACCCTGGATACCCGAGTTTTCCTCTGCAGGGCGGGTGTGGTGAAGGACCAGATGACTTCTCTCAGTCGTCTGATCGCCTGCATGAgcttaacacactcagagacCCGGTGCTGCTTAGTTACTATCAGCAGCAGGGAATCCTGCTCTGTGcttttaatgacttttaaacATTAAGGGCCACTTAACCCGGTCCTCAGGTGCTGCACATCTCAACGGGATTTCTAACAGACAACACCTGACTTCACTAATAAGCTTTTCTTCCAGTCCTCACGGGATAAATTAATTACCCAGTCAGGCGTCAAGCAGCTGTGAGATTGTTTTTCAGATCACTGGAACAATCGAGTTCTTAGCAGCTTTTCAACTGGATCATCAAACCATACACGTTacactgtgacactgtgtgaGGCCCGGGGACATGCTTCCAATAACTGTTATTATAGTGTTTTAGGTGTTTGTCTTATTTGAAGAACAAGTGCGAAAATCTTCAAAATGTGGGCTGCTTTCTCAAATCTTAGAGATAACTGGAAcatattttacattgttttaacCAAAAGCAGACGTTTCAAAAATGTCTGAACTGTGAAATTTGCAATAGTGTTGCATATGAAGTTTTTAGTGTCAGACTGAGCATGTGACAGTGAttatatcttttaaaatatatatatatatatatatatatatatatatatataatgtatattatcttttaaaattatatataatgtatatttttcttacatctattgtaaaaaatgtatgatattTTTATGGCATTGAGTGAATTAAAACTATAAGCATTTTATTCCATA
>XM_026931127.2
TAAGGCTAATTTCCAAATACCTCTGTACTCTCtatattagtgcactacatagggcgtGACGTAATAAAGACTAGCTATGTAATGCACTACATAAGGGTGCAAATAGAGATGGATTTGGGATCAAACCCAAATATTTTATGACTGCTGGTTCAGTTGGAGTAGGAGACACAGCAGCTAGTTATCAGAGAGAACCGGTATAAATGGCACAGACCTTGTAATGGGTAAAAATGGGAAATTAGTCACCCTAGAACATGGTCATAAGTTGATGGGTGAGAAACAGCACTTGATGTATGTGCCGTCAGAGCCAGGTATTGAACATGCCTCAGCCCAGAGTCAAGCTGGTGGTGACCGGGGATGATTTTGGGTACTGCGCGCGGAGGAACCGGGGCGTCGCCGAGGCTTTCCTGGCCGGTGGCATCTCCAACGCGTCTGTGCTGGTGAACGGAGCTTCTGCGGAACATGCGGCCCAGCTAGCCAAGAGACATTGCATTCCCATTGGACTCCATGCAAACCTGTCTGAAGGTGCTCCGGTGTGCCAGGAGCTGAGAAGGTCCACGCTCCTTAATAAAGATGGCTTCTTTCATGGGAAGATGGGTTTCCGTGAAGTTCTGCGGAGTGGAAAAATGAGCATGATGGATGTGGAGGTGGAGCTTAGGGCCCAGGTGAAGCATTTTTGCGAGCTCACTGGTCACCTGCCCAATCACATGGATGGCCATCAACATGTGCACGTGCTGCCAGaggTGCGAGAAGTGTTTGCGCGGGTTCTCTCTGATTTTGGCATCCCTTACACACGTGTCCCAGTGGAGCCTGGTTTGCACTCTTGTCATTTCCTACCTCCAAACCTCAGAGAATTCTACCTGCAGGTTGAGAAAGATGCACTCCAGTCTGTGGAAGTCTTCCATCGCCATGGTATCAGATGGCCAGATGTATACTTGGGCCTCAGCACGATGGGGCAGAACATGTCCTTTTCCAACCTCAAAAGAGTCCTGAACTTTGCTCTGGAGGCACGGACATCTATAGCCGCCCAGGCTGATGGCCTTTGTGCATCTGAATCgtatcagccaatcacagcagaGCTGATGGTACACCCTGGATACCCGAGTTTTCCTCTGCAGGGCGGGTGTGGTGAAGGACCAGATGACTTCTCTCAGTCGTCTGATCGCCTGCATGAgcttaacacactcagagacCCGGTGCTGCTTAGTTACTATCAGCAGCAGGGAATCCTGCTCTGTGcttttaatgacttttaaacATTAAGGGCCACTTAACCCGGTCCTCAGGTGCTGCACATCTCAACGGGATTTCTAACAGACAACACCTGACTTCACTAATAAGCTTTTCTTCCAGTCCTCACGGGATAAATTAATTACCCAGTCAGGCGTCAAGCAGCTGTGAGATTGTTTTTCAGATCACTGGAACAATCGAGTTCTTAGCAGCTTTTCAACTGGATCATCAAACCATACACGTTacactgtgacactgtgtgaGGCCCGGGGACATGCTTCCAATAACTGTTATTATAGTGTTTTAGGTGTTTGTCTTATTTGAAGAACAAGTGCGAAAATCTTCAAAATGTGGGCTGCTTTCTCAAATCTTAGAGATAACTGGAAcatattttacattgttttaacCAAAAGCAGACGTTTCAAAAATGTCTGAACTGTGAAATTTGCAATAGTGTTGCATATGAAGTTTTTAGTGTCAGACTGAGCATGTGACAGTGAttatatcttttaaaatatatatatatatatatatatatatatatatatataatgtatattatcttttaaaattatatataatgtatatttttcttacatctattgtaaaaaatgtatgatattTTTATGGCATTGAGTGAATTAAAACTATAAGCATTTTATTCCATA
>XM_026931128.2
AGGCTAATTTCCAAATACCTCTGTACTCTCtatattagtgcactacatagggcgtGACGTAATAAAGACTAGCTATGTAATGCACTACATAAGGGTGCAAATAGAGATGGATTTGGGATCAAACCCAAATATTTTATGACTGCTGGTTCAGTTGGAGTAGGAGACACAGCAGCTAGTTATCAGAGAGAACCGGTATAAATGGCACAGACCTTGTAATGGGTAAAAATGGAGCCAGGTATTGAACATGCCTCAGCCCAGAGTCAAGCTGGTGGTGACCGGGGATGATTTTGGGTACTGCGCGCGGAGGAACCGGGGCGTCGCCGAGGCTTTCCTGGCCGGTGGCATCTCCAACGCGTCTGTGCTGGTGAACGGAGCTTCTGCGGAACATGCGGCCCAGCTAGCCAAGAGACATTGCATTCCCATTGGACTCCATGCAAACCTGTCTGAAGGTGCTCCGGTGTGCCAGGAGCTGAGAAGGTCCACGCTCCTTAATAAAGATGGCTTCTTTCATGGGAAGATGGGTTTCCGTGAAGTTCTGCGGAGTGGAAAAATGAGCATGATGGATGTGGAGGTGGAGCTTAGGGCCCAGGTGAAGCATTTTTGCGAGCTCACTGGTCACCTGCCCAATCACATGGATGGCCATCAACATGTGCACGTGCTGCCAGaggTGCGAGAAGTGTTTGCGCGGGTTCTCTCTGATTTTGGCATCCCTTACACACGTGTCCCAGTGGAGCCTGGTTTGCACTCTTGTCATTTCCTACCTCCAAACCTCAGAGAATTCTACCTGCAGGTTGAGAAAGATGCACTCCAGTCTGTGGAAGTCTTCCATCGCCATGGTATCAGATGGCCAGATGTATACTTGGGCCTCAGCACGATGGGGCAGAACATGTCCTTTTCCAACCTCAAAAGAGTCCTGAACTTTGCTCTGGAGGCACGGACATCTATAGCCGCCCAGGCTGATGGCCTTTGTGCATCTGAATCgtatcagccaatcacagcagaGCTGATGGTACACCCTGGATACCCGAGTTTTCCTCTGCAGGGCGGGTGTGGTGAAGGACCAGATGACTTCTCTCAGTCGTCTGATCGCCTGCATGAgcttaacacactcagagacCCGGTGCTGCTTAGTTACTATCAGCAGCAGGGAATCCTGCTCTGTGcttttaatgacttttaaacATTAAGGGCCACTTAACCCGGTCCTCAGGTGCTGCACATCTCAACGGGATTTCTAACAGACAACACCTGACTTCACTAATAAGCTTTTCTTCCAGTCCTCACGGGATAAATTAATTACCCAGTCAGGCGTCAAGCAGCTGTGAGATTGTTTTTCAGATCACTGGAACAATCGAGTTCTTAGCAGCTTTTCAACTGGATCATCAAACCATACACGTTacactgtgacactgtgtgaGGCCCGGGGACATGCTTCCAATAACTGTTATTATAGTGTTTTAGGTGTTTGTCTTATTTGAAGAACAAGTGCGAAAATCTTCAAAATGTGGGCTGCTTTCTCAAATCTTAGAGATAACTGGAAcatattttacattgttttaacCAAAAGCAGACGTTTCAAAAATGTCTGAACTGTGAAATTTGCAATAGTGTTGCATATGAAGTTTTTAGTGTCAGACTGAGCATGTGACAGTGAttatatcttttaaaatatatatatatatatatatatatatatatatatataatgtatattatcttttaaaattatatataatgtatatttttcttacatctattgtaaaaaatgtatgatattTTTATGGCATTGAGTGAATTAAAACTATAAGCATTTTATTCCATA
>XM_034298900.1
TCTAAGGCTAATTTCCAAATACCTCTGTACTCTCtatattagtgcactacatagggcgtGACGTAATAAAGACTAGCTATGTAATGCACTACATAAGGGTGCAAATAGAGATGGATTTGGGATCAAACCCAAATATTTTATGACTGCTGGTTCAGTTGGAGTAGGAGACACAGCAGCTAGTTATCAGAGAGAACCGGTATAAATGGCACAGACCTTGTAATGGGTAAAAATGGACATTGCATTCCCATTGGACTCCATGCAAACCTGTCTGAAGGTGCTCCGGTGTGCCAGGAGCTGAGAAGGTCCACGCTCCTTAATAAAGATGGCTTCTTTCATGGGAAGATGGGTTTCCGTGAAGTTCTGCGGAGTGGAAAAATGAGCATGATGGATGTGGAGGTGGAGCTTAGGGCCCAGGTGAAGCATTTTTGCGAGCTCACTGGTCACCTGCCCAATCACATGGATGGCCATCAACATGTGCACGTGCTGCCAGaggTGCGAGAAGTGTTTGCGCGGGTTCTCTCTGATTTTGGCATCCCTTACACACGTGTCCCAGTGGAGCCTGGTTTGCACTCTTGTCATTTCCTACCTCCAAACCTCAGAGAATTCTACCTGCAGGTTGAGAAAGATGCACTCCAGTCTGTGGAAGTCTTCCATCGCCATGGTATCAGATGGCCAGATGTATACTTGGGCCTCAGCACGATGGGGCAGAACATGTCCTTTTCCAACCTCAAAAGAGTCCTGAACTTTGCTCTGGAGGCACGGACATCTATAGCCGCCCAGGCTGATGGCCTTTGTGCATCTGAATCgtatcagccaatcacagcagaGCTGATGGTACACCCTGGATACCCGAGTTTTCCTCTGCAGGGCGGGTGTGGTGAAGGACCAGATGACTTCTCTCAGTCGTCTGATCGCCTGCATGAgcttaacacactcagagacCCGGTGCTGCTTAGTTACTATCAGCAGCAGGGAATCCTGCTCTGTGcttttaatgacttttaaacATTAAGGGCCACTTAACCCGGTCCTCAGGTGCTGCACATCTCAACGGGATTTCTAACAGACAACACCTGACTTCACTAATAAGCTTTTCTTCCAGTCCTCACGGGATAAATTAATTACCCAGTCAGGCGTCAAGCAGCTGTGAGATTGTTTTTCAGATCACTGGAACAATCGAGTTCTTAGCAGCTTTTCAACTGGATCATCAAACCATACACGTTacactgtgacactgtgtgaGGCCCGGGGACATGCTTCCAATAACTGTTATTATAGTGTTTTAGGTGTTTGTCTTATTTGAAGAACAAGTGCGAAAATCTTCAAAATGTGGGCTGCTTTCTCAAATCTTAGAGATAACTGGAAcatattttacattgttttaacCAAAAGCAGACGTTTCAAAAATGTCTGAACTGTGAAATTTGCAATAGTGTTGCATATGAAGTTTTTAGTGTCAGACTGAGCATGTGACAGTGAttatatcttttaaaatatatatatatatatatatatatatatatatatataatgtatattatcttttaaaattatatataatgtatatttttcttacatctattgtaaaaaatgtatgatattTTTATGGCATTGAGTGAATTAAAACTATAAGCATTTTATTCCATA

Function

symbol description
ydjc Predicted to enable magnesium ion binding activity. Orthologous to human YDJC (YdjC chitooligosaccharide deacetylase homolog).

NR:

description
carbohydrate deacetylase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026931126.2 True 2189 mRNA 0.45 5 14931813 14937503
XM_026931127.2 False 1895 mRNA 0.44 6 14931813 14937770
XM_026931128.2 False 1822 mRNA 0.45 6 14931813 14937768
XM_034298900.1 False 1647 mRNA 0.43 5 14931813 14937772

Neighbor

gene id symbol gene type direction distance location
ccl19a.1 NA coding downstream 25813 14904207 ~ 14906000 (-)
tctn2 tctn2 coding downstream 28539 14888382 ~ 14903274 (-)
sec14l8 sec14l8,LOC108255515,LOC108431737,LOC107755846,LOC107599607,LOC107668747,LOC108431738 coding downstream 45752 14866164 ~ 14886061 (-)
LOC113537027 cnnm4,LOC108431740,LOC100150651,LOC107599606,LOC107668749 coding downstream 69241 14829205 ~ 14862572 (-)
ckap2l LOC108255521 coding downstream 106222 14807873 ~ 14825591 (-)
ppil2 ppil2 coding upstream 160782 15098554 ~ 15141215 (-)
gal3st1a gal3st1,LOC107741514,LOC107653284,LOC107755837,LOC107668734 coding upstream 206413 15144185 ~ 15158018 (-)
pes pes1 coding upstream 224251 15162023 ~ 15177372 (-)
pole pole,LOC107668756 coding upstream 254886 15192658 ~ 15225173 (-)
si:dkey-98f17.5 si:dkey-98f17.5,LOC108255717,LOC108431725,LOC107755832,LOC107668759,LOC107599615,LOC106580116 coding upstream 353227 15290999 ~ 15311616 (-)
G355456 NA non-coding downstream 124461 14807051 ~ 14807352 (-)
G355434 purb,purba,LOC108425219 non-coding downstream 150290 14778820 ~ 14781523 (-)
G355413 NA non-coding downstream 185867 14731311 ~ 14745946 (-)
G355377 LOC108255875 non-coding downstream 224892 14629776 ~ 14706921 (-)
G355375 NA non-coding downstream 334367 14597153 ~ 14597446 (-)
G355724 NA non-coding upstream 10182 14947954 ~ 14949438 (-)
G355732 NA non-coding upstream 11763 14949535 ~ 15026316 (-)
G355725 NA non-coding upstream 15444 14953216 ~ 14954814 (-)
LOC117595933 NA non-coding upstream 31586 14969358 ~ 14971217 (-)
G355726 NA non-coding upstream 104533 15042305 ~ 15074193 (-)
ccl19a.2 NA other downstream 7154 14908796 ~ 14924659 (-)
mrpl41 mrpl41 other downstream 1206955 13722105 ~ 13724858 (-)
LOC113536823 NA other downstream 4182975 10731527 ~ 10748838 (-)
LOC113536921 LOC108255872 other downstream 4414608 10509071 ~ 10517205 (-)
iqgap2 iqgap2,LOC107748460,LOC107565681,LOC107700055,LOC107561620,LOC107685248 other downstream 4520127 10370162 ~ 10411686 (-)
spring1 c22h12orf49,c21h12orf49,zgc:110063,clg12h12orf49,LOC104923683,LOC103134957 other upstream 642698 15580470 ~ 15589491 (-)
selenoe LOC108255849,LOC100703742,LOC101466006,LOC102210357 other upstream 895281 15833053 ~ 15841684 (-)
G356331 NA other upstream 1202017 16139789 ~ 16140270 (-)
rabl6b rabl6,rabl6b,LOC108435365 other upstream 1476917 16414689 ~ 16442957 (-)
si:ch211-102c2.8 LOC108255971 other upstream 1526655 16464427 ~ 16478840 (-)

Expression


Co-expression Network