c24h2orf68 (c22h2orf68,cunh2orf68)


Basic Information

Item Value
gene id c24h2orf68
gene name c22h2orf68,cunh2orf68
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047618.1
NCBI id CM018564.1
chromosome length 20251756
location 4789868 ~ 4796995 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026939879.2
AATGCACTAGGATTTCCCGGCTACACCAGctagacaaaaaaagaagatggaCGATAGTACACTTACCCGGGATCTTAACGTAAATCAATTCACAAATATAGGTCTTTTGATAGTTATTGTTCTATACTGTTGCTTATACTGTTGAATTACTTCACATAGATATAGTGAGCGGAAAAGGTCACTTTTAATTAGTGGGATATATATTCTATTgcgttgtttttttctttgtaaaactCCGAGTGTGTTTTTTTGGCCAACACATTAGCCCCAGCCACAGAGGATGCACTGGAGTGTTTTGCTCAGTTAGTTTCTTCTTGTTTGACGCTCTGGGATATGGAAGTTTTGCAGAATGACGAGGGAGAAACACATAAATACAAGCCGGGGGGTCGCTTGGATATGAATCACGGTTTCCTGCACCATATCCGGAGAAATCAGATTGCCAGgGATGATTATGACCGGGAGGTTAAACAGGCTAAAGAGCAGCAGAAGCGCAGACACACGGCGGCCCCGCGGCGACCCCGCAGACCAGACCGGGAGGTTTACCATCCCCGCCATCGCAGCAGCTCAGAGGCTGGGGCTGGTGGGGAGGTGGAGGAGTGGAACGAGAGCGGCTCGAGCACAGAGCAGGAGAACACGGGCACTGAACTCTTCTGGCTCGACTACCAGGCTGACAGCGGACACGTAACATCCTTCCTCGTCTATAAGGAGGATGAGCCAGAAAGTGTAGTAGAACGGGTGGAGCAGAAGAACGTTCTGGACACGGCTATGAGGGCAGCGCTGCTGGCAAGAATCAGCCGAGAAATGGATAAGCGGCGAGACAAACGCTGAGGTTTGAAAGGAAAGCAATGATGGATGGCTTTATACAACAATAAAGACAGTTGTAATGtgtgagatacacacactcacacacacacacacacacaccgctgaGTCTGACAGAATCTGATAGGAACTACAGGAGCACCAAGAAAGCAACAGTACAGATGTTCATGCAGATGTTCTTCGTCTCTGTACACAGATTTGAAGAGAAACGGGGAAGTTTCACAGTGAAAATGAGCACCACTTTCTACAATATAGAAATAATCTCATATCATATTTGATTTGATCCCGTTGTTAGGATGGTACAGGGGATGCGATGTAAGCGCACTCAAAAAACAAGAAGCAGAATGAATGACGTTAAACATCTTTAACATCGAGAGTGATCAGATCTCATCCATGTACATCCGGACTTTTATATTACGCAGTAACTGCACATCTTTTCACATTGTTTGAGGatgtattgtatataatattatgCAGTCTTGTAATGTTTAGCTCAGGACTAGATGCAAAAGGTTTCAGAAACTAAACGGTAATCGTTTTTCAATTGTAGTAGTTATGcagagaaaacaacaaaaccctGCCACATGACacctgacactttttttttttataaccaaaactGCAGAAAAATCACATAATGGTTCAGGTAGAGATGTGTAGTTCCTCAGGTGCCACTGAATGGGTGACATTAAAGAggtcatttcctcatatttcaTACACAGACgtcttattaatgtttatttatgatgGTCATGTTTTGTTTGAGGAGAACTTCTGTCTTACTGTTATCTTTTCACcaggaatgatttataatattGAACTGTATGACTTTTTTATGACAGTGAGTTATTCATCAGGACTTCTTTTGGATGTAggaagagatttttttatttttgtaaccgTGTTCTCTGtgctaaaatatataaagcatgCTAAAGAATCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026939879.2 True 1766 mRNA 0.42 4 4789868 4796995

Neighbor

gene id symbol gene type direction distance location
selenom selenom,LOC103043669,LOC108438490 coding downstream 60775 4713147 ~ 4729093 (-)
alkbh2 alkbh2,LOC107552593,LOC107746816 coding downstream 254389 4530121 ~ 4535479 (-)
eif2b1 eif2b1,LOC107728130 coding downstream 314986 4467458 ~ 4474882 (-)
LOC113542247 lrrc43 coding downstream 360097 4402268 ~ 4429771 (-)
rsrc2 rsrc2,LOC107702941,LOC107752237,LOC107571524 coding downstream 388081 4389617 ~ 4401787 (-)
sftpbb LOC108255529 coding upstream 10455 4807450 ~ 4815249 (-)
ank1a LOC108255531,LOC108438466,LOC107722748,LOC107702961 coding upstream 28968 4825963 ~ 4930853 (-)
ebf2 LOC108255422,LOC108438472,LOC105027009,LOC100704273,LOC102791852 coding upstream 150957 4947952 ~ 4974098 (-)
dguok LOC108256054,LOC108438482 coding upstream 203028 5000023 ~ 5004375 (-)
mob1a LOC108255806,LOC107087288,LOC107739988,LOC101073635,LOC102234237,LOC107675956,LOC101160416,LOC107702973,LOC103470272 coding upstream 210207 5007202 ~ 5016415 (-)
G349642 NA non-coding downstream 3844 4777030 ~ 4786024 (-)
G349655 NA non-coding downstream 85702 4703393 ~ 4704166 (-)
G349547 tmed2,LOC105026094,LOC105904311 non-coding downstream 277856 4464174 ~ 4512012 (-)
G349333 NA non-coding downstream 1067849 3718239 ~ 3722019 (-)
G349325 anxa1,LOC108255810,LOC108255809,LOC100335033,LOC108438700,LOC108434481 non-coding downstream 1092344 3695478 ~ 3697524 (-)
G349805 NA non-coding upstream 209281 5006276 ~ 5006649 (-)
G349812 NA non-coding upstream 221111 5018106 ~ 5018675 (-)
LOC117595908 NA non-coding upstream 258347 5055342 ~ 5060388 (-)
G349823 NA non-coding upstream 268782 5065777 ~ 5066161 (-)
G349830 NA non-coding upstream 305733 5102728 ~ 5102953 (-)
G349584 ung other downstream 250037 4539283 ~ 4539831 (-)
carnmt1 carnmt1 other downstream 585764 3882016 ~ 4204104 (-)
trpm6 LOC108255945,LOC108438703 other downstream 909920 3832085 ~ 3879948 (-)
trpm3 trpm3,LOC108434489,LOC108255677,LOC107595026,LOC107673407,LOC107672763,LOC106928040,LOC106941846 other downstream 1402138 3319785 ~ 3387730 (-)
tm2d2 tm2d2 other downstream 1623614 3156042 ~ 3166254 (-)
hip1rb hip1r,LOC108255864 other upstream 451653 5248648 ~ 5327552 (-)
G349951 NA other upstream 524518 5321513 ~ 5364282 (-)
LOC113542328 hectd4 other upstream 565287 5362282 ~ 5523281 (-)
LOC117595919 NA other upstream 778793 5575788 ~ 5578981 (-)
pappab LOC108255326,LOC108423596 other upstream 1259986 6056981 ~ 6120959 (-)

Expression


Co-expression Network