klf9 (klf9)


Basic Information

Item Value
gene id klf9
gene name klf9
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047618.1
NCBI id CM018564.1
chromosome length 20251756
location 3307168 ~ 3312856 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026939927.2
aggtggaggtggtggtggtggaggcgCGCGCGCCCAAGTTTTGACGCAGTTATGAAGAGAACTAGCAAGGCAACGGCACGACTTGGGGATTTTGTCCGGCTGGAAATTGTGCAACAGTTGTCCAAAGCCCTCTGGCTGTTTTCGACGTAGACGGAAAGACTTGTAGATTAGACGGATAATCACGGGTGGAAGGGTGTGAGGGTGGACACCACGTTTCCTGGAGCTGACTTCTGATAAACGAGTTGCACAAGAGCTGCGAAGAAGGAAAGCaacattgtgttttgtgtgaggTGGTTCAGGACACCTTGGAACATCACGGCCTGGTCTTGGAAAGAAAAGCTCCAGACGATCATGACGGATGTGGATGTCGCCGCGACGCGCGCGCTGTCCCCCGCGGACGGAGCGGATGTGGATGTGGAGGCGGAGGCGATGGAGATGGAGAGCCAGGAGAGCCGCACGCTCCTGATGGTAGCGATGATCCTGCTGGATTTGAACCGGTGCGGCGGAGTGTGTCCTAAGAGCGCAGTAGAGAGCGCCGCAAACGGGCAGCCCGGCGTGAGGGACAAGTGCCGAGCGCCTGGGAGCGAGCGGCGCGTGCGCAACCGGCAAAGCGCCGACAAGAAGCACCGCTGCCCCTACGCGGGATGTGGCAAGATCTACGGCAAGTCATCGCACCTGAAAGCGCACTGCCGTGTACACACCGgtgaGAGACCATTCCAGTGCACATGGCCAGGCTGCATCAAGCGTTTCTCCCGATCAGATGAGCTGACGCGCCACTTCCGTACACACACGGGCGAGAAGCGCTTCGCCTGTCCCCTCTGCACCAAGTGCTTCATGCGAAGCGACCACCTGACCAAGCATGCGCGCCGCCACGATGGCTTCCATCCCAGCATGCTCTGCAAGTCCAACAGCCGGAGGCGCCGCTCGTCAGCCTCCACGTCCTCCTCTGGCTCGGGAGATGCTGAGTGACGCTCAGAACTTTTGTAAACCAACTTACTGATCGGTATAGGATCTACACACCCTTCTGATCCTTTGTGACCGTCTCTAGTCTGAGCTTTCACGTTATCCATATGCGACATGCGAataaaagcgtaaactctttcGCACACATAATCCGCTAAACTGACAGCAAAcgtaagtatatatatatatatatatatatatatatatatatatatgtatatatacttaATGTTAAGGGGATGGTTGACAAGCACAATGGCAGAAATGTAGGTGTGTGCTGATATAAGATCTAGTCGCCTAAACTATTGTCATGGTTTACAATAATTGTGATGGCATcgcataaaaaaatacatgttctAAATATCATAATTTCTCACGTAAAACCACATCGGACCAATTCTTCAATTCAAGAATGAACTCATGTTGAGTATCACCGTATATTACAGAACTGCTTGATTATCAGCACATGACTACTCCCATGCCAGTGGGTTTTACACgttgtttccttttttgttgCTTAAGGAAAACACAACTGGCAGAAAttcaaaaatacacaatttcCCCCTTAGACCCCCTTAGACCTAGTTAATCAGCTAATTACATGTTCGGTATTGGACATTTGTTTCCTCGGTTTTGCACTGGAGCATCAACGCTAACGTAGGTAACAAGTCTTCCTCGAACCGTATCCAGTTATTCGTTGGTTCGGTGATGTGATCTGGGACATTGTAGGGcttactgtaatctataaacGTTAGCAAAACTTCACAGTGTAGCTGAACATGGCGGCCATTTTGGAAATCCAGAATCactacatatataatataaagtgaTTCTGGATTTCCAAAATGGCCGCCACGTTCAGCTACAGTGTgaacaaaattaatcaactatCTAACGCCAAACCAAAcgtcttggctgattgaatacATTTGCGTTCAGGGGAAATtgtgtagttatttattttctttaataccACGAATGGTCAGATCTATAATCAATGAAGacagtaaattaataaacaaacatcgAGATTCTCTGTGAAGAGTACAAGATAGCTAATTCTAAGATAGCTACGACTGAAGACTACTTATTTGTGGAAAAAGTCACAAAACTGTATCGCATTAGCTGAGTGtcattttaattagaaaaactATTTGTGTAGCGGATTCCGTAGATCCAATCATTGTGCCATTTTATTACAGACGTCTTGGCCGTATGCAGGTACATTCAGATTTTGCGTTGTTCATCCGTATGATTTTCAGACTTGATGGCTGTCAAAtgatgtgtatttatgtattaattcCCCACCTGAATTCCTCtatctttttttcagtgatgttgCTTCTACGAGGGAatgtgtgggattttttttttagaccatTTCTATCTTATTTTTACTAATATGTAATATACTGGGCTGTAATTTAGTACTGTCTTTAAAGGCTTGTTTTTGACGAATCTCCATCGCCATTTTAGATTTTGATACGTTATCAGCCCAAATGTTTTTCCAATGAGTCTTTGGGGGGTTGCAAATCTATCAAGTAAGCACGACTGTATTAACTTGAGTAGCAGAATTTACAGAGAACGTAGCATGGAAATGGTGGATATAGCGATTCGAAGTAAGCATGAACACTACAGTGCTTGAGCGTGTTTAAAGGAAACGGAGGCAGTTGAAAGGAAATTGAACCTGAAAGGAAATGCTTTTAGCAAGAACTGACATGACATCATGTTACTCTGCTGTCTAGTAAACGACGTAGCTAGTTAAGAGCATATCTTGGAGACGAGCTAGCTAGCAAGTTGATATGATTCTACACAAATTCGAAGGAAAGAGACTGTAGAAATCCGTGAAAGCAAGTGCACTTTTTCATGCCAGTACTTGCAAATTCGTCTTGATAGGAAGTAAGACAAGGGCTTGTTTAAAATAGTATAGAAGCGCAAGGATAGTATTATCGCTAGTCCTGGACTTTCCCAGTTACTGTATCATGTGTACTAACTTCATCTTTTGGTTTATTGAGTGGTAAGGAAAAGgagcgtgtttttttttttctttttagatttCAGTAACAGGCAAACCAacttaatttacataatttacttGAAATAGTCAACGCTGTGACTTTGATATAAGAGCAGCCACCAAGTGAATGACGACAATAGTAATGACAAAATATAGTGTGTTCAGATAGTGTGAGTGAATTAATTCAGCTGTCAATCACACGAGAAACGGTCGCGTCAGTATAGCACCCCTTTTCTGTACTGAGGCCCTCAATTCACATGCACTTTTTAAAGATATGGATGTATTTTTCTATGTCAGAATTTTCAGGTTCTCTTTATGTTTTTGACCTGTAAAGAATGTAACAATACACTGCCTCGTCACTGACATCATATCACCTTCATCCTCGTAATGAATGTACAATGGACTGAACTAACCACTGACAGATGCTTCGTATTAAATTCTTTTGTTCTTGCACACCTACCACATCTGTACATatgataataatatgaaaacattgttcattttgaattttgctGTACTATTTTCAACAGAACGTGATGTCCACCTGTATTTTCAGTTCATGACTTCATTCAGAATTGCttatacttcttttttttttgctgaaaatgtaaaaataaaacattaaaacacgaCCAGAGGACAGTTCCGTGTAGCCAAATTTTCATACCTTGACGCTTAACCCAAAATGAGTTTGCTTGATGATTGAATGCAGAGTAATATTTCAGTCATATTTCCAAGCATGACACCTTCTGATTGTACTTTTGTTGTACTTACTAATTAATTTCTTATTGTaatagaatgagtgtgtgaagtttgtTTCGATTAAGATATTATAAGTGTGAAATAACTATATATTCGATTAAGATAGTTATTTCTGCTTAATATTGAATTGATTTCATATACAGCAATGGgtaatattatatcattatagtCACATGACTAAAAtcagaaatcattaaaaaaaatttaagtgcCCATTTCaataaaaagattatttttcagataaaaaaataaaagatgtaaCTATTATCTCAAGGCATACTTAACTGTAATAGCAAACTCAACATGCAAGTGTATCATGTCAATGTTAAACAATGAAGAACTGTCAGTtgagtaagaaataaaacattttggtgtgttgttataggaaaataatcaacaaaggcagggtgtgatgtggcctgatgcaaagtgcaattacttttaccaccccgaagttga
>XM_034299051.1
aggtggaggtggtggtggtggaggcgCGCGCGCCCAAGTTTTGACGCAGTTATGAAGAGAACTAGCAAGGCAACGGCACGACTTGGGGATTTTGTCCGGCTGGAAATTGTGCAACAGTTGTCCAAAGCCCTCTGGCTGTTTTCGACGTAGACGGAAAGACTTGTAGATTAGACGGATAATCACGGGTGGAAGGGTGTGAGGGTGGACACCACGTTTCCTGGAGCTGACTTCTGATAAACGAGTTGCACAAGAGCTGCGAAGAAGGAAAGCaacattgtgttttgtgtgaggTGGTTCAGGACACCTTGGAACATCACGGCCTGGTCTTGGAAAGAAAAGCTCCAGACGATCATGACGGATGTGGATGTCGCCGCGACGCGCGCGCTGTCCCCCGCGGACGGAGCGGATGTGGATGTGGAGGCGGAGGCGATGGAGATGGAGAGCCAGGAGAGCCGCACGCTCCTGATGGTAGCGATGATCCTGCTGGATTTGAACCGGTGCGGCGGAGTGTGTCCTAAGAGCGCAGTAGAGAGCGCCGCAAACGGGCAGCCCGGCGTGAGGGACAAGTGCCGAGCGCCTGGGAGCGAGCGGCGCGTGCGCAACCGGCAAAGCGCCGACAAGAAGCACCGCTGCCCCTACGCGGGATGTGGCAAGATCTACGgtgaGAGACCATTCCAGTGCACATGGCCAGGCTGCATCAAGCGTTTCTCCCGATCAGATGAGCTGACGCGCCACTTCCGTACACACACGGGCGAGAAGCGCTTCGCCTGTCCCCTCTGCACCAAGTGCTTCATGCGAAGCGACCACCTGACCAAGCATGCGCGCCGCCACGATGGCTTCCATCCCAGCATGCTCTGCAAGTCCAACAGCCGGAGGCGCCGCTCGTCAGCCTCCACGTCCTCCTCTGGCTCGGGAGATGCTGAGTGACGCTCAGAACTTTTGTAAACCAACTTACTGATCGGTATAGGATCTACACACCCTTCTGATCCTTTGTGACCGTCTCTAGTCTGAGCTTTCACGTTATCCATATGCGACATGCGAataaaagcgtaaactctttcGCACACATAATCCGCTAAACTGACAGCAAAcgtaagtatatatatatatatatatatatatatatatatatatatgtatatatacttaATGTTAAGGGGATGGTTGACAAGCACAATGGCAGAAATGTAGGTGTGTGCTGATATAAGATCTAGTCGCCTAAACTATTGTCATGGTTTACAATAATTGTGATGGCATcgcataaaaaaatacatgttctAAATATCATAATTTCTCACGTAAAACCACATCGGACCAATTCTTCAATTCAAGAATGAACTCATGTTGAGTATCACCGTATATTACAGAACTGCTTGATTATCAGCACATGACTACTCCCATGCCAGTGGGTTTTACACgttgtttccttttttgttgCTTAAGGAAAACACAACTGGCAGAAAttcaaaaatacacaatttcCCCCTTAGACCCCCTTAGACCTAGTTAATCAGCTAATTACATGTTCGGTATTGGACATTTGTTTCCTCGGTTTTGCACTGGAGCATCAACGCTAACGTAGGTAACAAGTCTTCCTCGAACCGTATCCAGTTATTCGTTGGTTCGGTGATGTGATCTGGGACATTGTAGGGcttactgtaatctataaacGTTAGCAAAACTTCACAGTGTAGCTGAACATGGCGGCCATTTTGGAAATCCAGAATCactacatatataatataaagtgaTTCTGGATTTCCAAAATGGCCGCCACGTTCAGCTACAGTGTgaacaaaattaatcaactatCTAACGCCAAACCAAAcgtcttggctgattgaatacATTTGCGTTCAGGGGAAATtgtgtagttatttattttctttaataccACGAATGGTCAGATCTATAATCAATGAAGacagtaaattaataaacaaacatcgAGATTCTCTGTGAAGAGTACAAGATAGCTAATTCTAAGATAGCTACGACTGAAGACTACTTATTTGTGGAAAAAGTCACAAAACTGTATCGCATTAGCTGAGTGtcattttaattagaaaaactATTTGTGTAGCGGATTCCGTAGATCCAATCATTGTGCCATTTTATTACAGACGTCTTGGCCGTATGCAGGTACATTCAGATTTTGCGTTGTTCATCCGTATGATTTTCAGACTTGATGGCTGTCAAAtgatgtgtatttatgtattaattcCCCACCTGAATTCCTCtatctttttttcagtgatgttgCTTCTACGAGGGAatgtgtgggattttttttttagaccatTTCTATCTTATTTTTACTAATATGTAATATACTGGGCTGTAATTTAGTACTGTCTTTAAAGGCTTGTTTTTGACGAATCTCCATCGCCATTTTAGATTTTGATACGTTATCAGCCCAAATGTTTTTCCAATGAGTCTTTGGGGGGTTGCAAATCTATCAAGTAAGCACGACTGTATTAACTTGAGTAGCAGAATTTACAGAGAACGTAGCATGGAAATGGTGGATATAGCGATTCGAAGTAAGCATGAACACTACAGTGCTTGAGCGTGTTTAAAGGAAACGGAGGCAGTTGAAAGGAAATTGAACCTGAAAGGAAATGCTTTTAGCAAGAACTGACATGACATCATGTTACTCTGCTGTCTAGTAAACGACGTAGCTAGTTAAGAGCATATCTTGGAGACGAGCTAGCTAGCAAGTTGATATGATTCTACACAAATTCGAAGGAAAGAGACTGTAGAAATCCGTGAAAGCAAGTGCACTTTTTCATGCCAGTACTTGCAAATTCGTCTTGATAGGAAGTAAGACAAGGGCTTGTTTAAAATAGTATAGAAGCGCAAGGATAGTATTATCGCTAGTCCTGGACTTTCCCAGTTACTGTATCATGTGTACTAACTTCATCTTTTGGTTTATTGAGTGGTAAGGAAAAGgagcgtgtttttttttttctttttagatttCAGTAACAGGCAAACCAacttaatttacataatttacttGAAATAGTCAACGCTGTGACTTTGATATAAGAGCAGCCACCAAGTGAATGACGACAATAGTAATGACAAAATATAGTGTGTTCAGATAGTGTGAGTGAATTAATTCAGCTGTCAATCACACGAGAAACGGTCGCGTCAGTATAGCACCCCTTTTCTGTACTGAGGCCCTCAATTCACATGCACTTTTTAAAGATATGGATGTATTTTTCTATGTCAGAATTTTCAGGTTCTCTTTATGTTTTTGACCTGTAAAGAATGTAACAATACACTGCCTCGTCACTGACATCATATCACCTTCATCCTCGTAATGAATGTACAATGGACTGAACTAACCACTGACAGATGCTTCGTATTAAATTCTTTTGTTCTTGCACACCTACCACATCTGTACATatgataataatatgaaaacattgttcattttgaattttgctGTACTATTTTCAACAGAACGTGATGTCCACCTGTATTTTCAGTTCATGACTTCATTCAGAATTGCttatacttcttttttttttgctgaaaatgtaaaaataaaacattaaaacacgaCCAGAGGACAGTTCCGTGTAGCCAAATTTTCATACCTTGACGCTTAACCCAAAATGAGTTTGCTTGATGATTGAATGCAGAGTAATATTTCAGTCATATTTCCAAGCATGACACCTTCTGATTGTACTTTTGTTGTACTTACTAATTAATTTCTTATTGTaatagaatgagtgtgtgaagtttgtTTCGATTAAGATATTATAAGTGTGAAATAACTATATATTCGATTAAGATAGTTATTTCTGCTTAATATTGAATTGATTTCATATACAGCAATGGgtaatattatatcattatagtCACATGACTAAAAtcagaaatcattaaaaaaaatttaagtgcCCATTTCaataaaaagattatttttcagataaaaaaataaaagatgtaaCTATTATCTCAAGGCATACTTAACTGTAATAGCAAACTCAACATGCAAGTGTATCATGTCAATGTTAAACAATGAAGAACTGTCAGTtgagtaagaaataaaacattttggtgtgttgttataggaaaataatcaacaaaggcagggtgtgatgtggcctgatgcaaagtgcaattacttttaccaccccgaagttga

Function

symbol description
klf9 Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Acts upstream of or within T cell proliferation and erythrocyte maturation. Is expressed in forebrain; hindbrain; and midbrain. Orthologous to human KLF9 (Kruppel like factor 9).

NR:

description
PREDICTED: protein FAM83H-like

GO:

id name namespace
GO:0005488 binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026939927.2 True 4201 mRNA 0.41 2 3307168 3312856
XM_034299051.1 False 4159 mRNA 0.41 2 3307168 3312856

Neighbor

gene id symbol gene type direction distance location
araf araf,LOC108255753 coding downstream 64327 3229104 ~ 3242841 (-)
tbx3b tbx2a,LOC108255409 coding downstream 107110 3168278 ~ 3200058 (-)
hdr NA coding downstream 505614 2793455 ~ 2801554 (-)
LOC113542230 LOC108255680 coding downstream 515594 2786249 ~ 2791574 (-)
LOC113542232 LOC108255682,LOC108434266,LOC108417841,LOC108415785,LOC107715185,LOC107581013,LOC107745493 coding downstream 521231 2785439 ~ 2785937 (-)
cemip2 tmem2 coding upstream 198259 3511115 ~ 3546480 (-)
abhd17b abhd17b,LOC103022021,LOC107599913,LOC107592319,LOC107672759 coding upstream 239663 3552519 ~ 3568775 (-)
LOC113542282 si:dkey-96l17.6,LOC108255364,LOC108434467 coding upstream 352116 3664972 ~ 3673856 (-)
wu:fa19b12 NA coding upstream 562026 3874882 ~ 3879761 (-)
LOC113542542 LOC108255316,LOC108255814,LOC108255815,LOC108262011 coding upstream 678051 3990907 ~ 3993684 (-)
G348681 NA non-coding downstream 42346 3262269 ~ 3264822 (-)
G348678 NA non-coding downstream 48116 3256110 ~ 3259052 (-)
G348669 NA non-coding downstream 83669 3223300 ~ 3223499 (-)
G348662 NA non-coding downstream 99334 3205505 ~ 3207834 (-)
G348663 NA non-coding downstream 101884 3204091 ~ 3205284 (-)
G348695 NA non-coding upstream 2518 3315374 ~ 3315944 (-)
G348906 NA non-coding upstream 237721 3550577 ~ 3551672 (-)
LOC117595903 NA non-coding upstream 248810 3561666 ~ 3607376 (-)
G348909 NA non-coding upstream 302215 3615071 ~ 3616581 (-)
LOC117595902 LOC108255364 non-coding upstream 369724 3682580 ~ 3685306 (-)
tm2d2 tm2d2 other downstream 140914 3156042 ~ 3166254 (-)
unc5db unc5d,LOC108434269 other downstream 342279 2811544 ~ 2964889 (-)
LOC113542231 LOC108255681,LOC107659283,LOC107721542,LOC108434264,LOC107587464,LOC107709859 other downstream 475489 2773722 ~ 2831679 (-)
G348491 LOC108255682,LOC108434266,LOC108419634,LOC108415785,LOC108417841,LOC107715185,LOC107690133,LOC107745493 other downstream 521272 2784677 ~ 2785896 (-)
zmat4a zmat4,LOC108434259,LOC107594996,LOC106580521 other downstream 642686 2601534 ~ 2664482 (-)
trpm3 trpm3,LOC108434489,LOC108255677,LOC107595026,LOC107673407,LOC107672763,LOC106928040,LOC106941846 other upstream 6929 3319785 ~ 3387730 (-)
trpm6 LOC108255945,LOC108438703 other upstream 519229 3832085 ~ 3879948 (-)
carnmt1 carnmt1 other upstream 569160 3882016 ~ 4204104 (-)
G349584 ung other upstream 1226427 4539283 ~ 4539831 (-)
hip1rb hip1r,LOC108255864 other upstream 1935792 5248648 ~ 5327552 (-)

Expression


Co-expression Network