araf (araf,LOC108255753)


Basic Information

Item Value
gene id araf
gene name araf,LOC108255753
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047618.1
NCBI id CM018564.1
chromosome length 20251756
location 3229104 ~ 3242841 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026939936.2
CTGCAATCTCTCGCTGATCTGACTTCAGATTGAGAGAATTCAAGATGGCCGCCGCCTCAGGCTCCAGGTGAGGGCGCCACTCTgttctactctctctctctctctctctctctctctctccctctctctcttgcgGCTGACTGAAGCTCAGTGCTGCATCCTCCCTGTCTCTGCTTCCCCGTGGAGACGCCATGTCCTCCACGTCGTCCTGCTCCTCGTCGGGGGAGACGAGCCCGGAGGACGTTCCCCGAGGAGGAGGAACCATCCGTGTCTACCTCCCCAACAAACAGCGCACAGTGGTGAACGTGCGTCCAGGTCAGACGGTGCACGACAGTCTGGACAAAGCGCTCAAGGTGCGAGGCCTCACTCAGGACTGTTGCGCCGTTTTCCGCCTCCTCGAAGGTCGTAAAAGGCTGACAGAATGGAACACTGACATCACACCCCTCGTCGGAGAGGAGCTTCTTGTCGAGGTTTTGGACGACGTCCCCCTCACCATGCACAACTTCGTTCGTAAAACCTTCTTTAAGTTAGCGTACTGTGACTTCTGCCACAAGTTCCTGTTTAACGGCTTCCGGTGTCAGACGTGCGGCTACAAGTTCCACCAGCACTGCAGCAGCAAAGTGCCCACAGTCTGCGTGGACATGGACACCATGAAACGgtATGCAGGAGATTGTGCAACAGTCACTGGTGAAGTTGTGTCCGATCCTATCCCCGCTGGCATCCCTTTAACCCCTGAGCCTGCTGGTTCAGCGCTGCTCTCGCCAGCCTCGGCGTTCCACTTCCCCATGCCGGGAGGGGACGGTCAGTCTCTGCAGAGGCTTCGCTCCACCTCAACCCCCAACGTCCACATGGTCAGCACGCTGGGGCCTGGAGCGGCCAGCGTCATCGAGGAGGCATTAAAATCCAACAGCCCAATGgGACCAGAATCCTCTCCCAAACCCTCGACTAGTCCACCTCACCTTGGCTCTCCGGGTCGAAAACCACCCAAATCGCCCCCGGAGCGCAAACCGGCCCCCATCCTTGAcggaaaaaaggaaaggaatcAGCGTTACAGAGACTCGAGCTACTACTGGGAAGTGCCGTCGCACCAAGTGACCATGCAGAAGCGCATCGGCGCCGGCTCCTTTGGCACCGTCTTCAAGGGCAAGTGGCACGGAGACGTGGCCATCAAGATCCTGAAGGTGACAGAGCCGACGCCGGAGCAGCTGCAGGCCTTCAGGAATGAAATGCAGGTCCTGCGGAAGACGCGCCACGTCAACATCCTGCTGTTCATGGGCTTCATGACGAAGCCGCACTTCGCCATAATCACGCAGTGGTGCGAAGGCAGCAGCCTTTACCGCCACCTGCACGTCACCGAGACCAAATTCGACACCATGAGGCGCATCGACGTGGCGCGCCAGACGGCGCAGGGCATGGACTACCTTCACGCCAAGAACATCATTCATCGGGACCTGAAATCTAATAATATCTTCCTGCACGAGGGTTGGACGGTGAAGATCGGCGACTTCGGCTTGGCCACGGTGAAGTCTCGCTGGAGCGGCTCGCAGCAGGTGGAGCAGCCCAGCGGATCCATACTCTGGATGGCTCCGGAGGTGATCCGCATGCAGGACCCGAACCCTTACACCTTCCAGTCGGACGTGTACGGCTACGGCGTGGTGCTGTTCGAGCTCATGTCCGGCACGCTGCCTTACTCCAATATCAACAACCGCGACCAGATCATTTTCATGGTGGGTCGAGGCTACCTGTCACCAGACCTCAGCAAGCTGTACAGTAACTGCCCCAAGTCCATGAAACGTCTCATCATTGACTGTCTGAAATTCAAACAGGACGAAAGGCCGCTCTTTCCTCAGATCCTGGTGTCCATCGAGCAGGTGCAGGATCTCTTGCCCAAGATCGAGCGCAGCGCCTCGGAGCCGTCGCTGCACCGCGCCGTTCACGCTGAGGACCTGAACCCGCTGCTGCTGCACACCACACGCCTCCTGCCTCTGTGAAACCAGAAGATTCTGCACAAGATTCTGTCCTCcgcactcactacacactcacacactctctctctctcacacacacacacactctctcacacacacacacacattcctgctgTGCATTCCTTGTCTCCTTAACGCATCAGCAAAACTTTCCAGTCATTCCAGTCATTTCTCCGTGTGAACAAACGGTCCTCTGATAcgatttattcatattttattcttcCCTTTTGCAACCCGagagcatttatttttactctgaAATCCGTCACAAACTCGATTCGATTGTGGCCACATTCGCAGACGTAGAGAAACCTAAAGCGTTTCTGAGTTATAGTGATATTTCCGTTATGGGGATTTTGATCACATTTCTAATTAAACTCATTTCATTCATGTTTAGATGCGGGATTGCGAACGTCCGATTCTGCGTTTAGAAACACCAGTCGGTTTGCACTTTAATATTAGAAATCCATACACGACGAGCGAACACTACACGTTTTCTAAAGCACCAGTACCTTCCTGTCATGACTtagacatgtttaaaaaaattgcactcCTTCCCTTAAGCTAAGGCTTGATCAAGGCGGCTTCGTTAGCGTAGTCAGTTATGCAGTTTATTCTAGTAATCAGCATGTACCGTTGtgttaccatggtaacagaGCATTTAATCCTTGCACGTTTTAAAACCTTGGGACCAAGCAGCCAGAAATCGGTTTTTGTAACAAGGAGGAACGGGGGAAACGGAGCAGGTGGAATGAGGTTCCTGCAGATAAACCTTTCTTAGTCGCAGACTCGCCATCCTCTTAGGTGTTTTATAGGTAGCCGAGAGTTTTCACCGTATTACAGTAAAGAGCAAATTCCATTCAGAATGCACACATCACGTAACTAGCTATGTACAATTGTTTGTGCTGCCATGGCAACCGGCAGTTAGCTACAGATAGGAACGCCCCTTATAGAGACCAGTGTTAAATGACGTGAGGTTAGGAACGGACGCCGCTTTTCTTTGTTCGGTTCTTTGCATGCTGTCTAATCAAACAAGGGAGCAGGttagaaaacaggaagtagttatgtgtgaaaattttACCGTATCCCTCCCTCAGAAAACCTGTTCTACATAGCGACGATATATCGGTATGATGGTTTACGAAAAAATTCTGAAGGATAAAAGCGATCCTCTTGGGAACATGTTCTAGCAAAATAGCAACCACcttagcaacaccctagcaagcacatggaataccatagcaaccacttTAGCAACAACCTTGCAACACCCTAGCAAACACCTGGGATGTCATAGCAACCATCTAGCAACAACCTTGCAACACACTAGCAAACACTTGGAATGCCATAGCAACCATCTAGCAACAACCTTGCAACACACTAGCAAACACCTGGGATGCCATAGCAACCATCTAGCAACAACCTTACAACACACTAGCAAACACCTGGGATGCCATAGCAACCATCTAGCAACAACCTTGCAACACCCTAGCAAACACCTGGGATGCCATGATAAGCTTCGCaagtaattttaatttattttttttttgaggaaatgCACGTTGCTAGTGAACGTGTAGCTGTAGACAGATAACGCAGGGTAACATCAGTTAACGAGAAACgcagagaaaaaaatctttatggCCAGCAGGGTATCAGCGAGTCATCAGCAGTGTGTCCGGGTGATGATTTTTCAGTTAGCAGcgtgtacagtgtgtttcacGGGCTTGGCAGTCTAGCCGAGTACATTCCAGTTCAATCTGGACTGTGAAGCGGCACAGCGTGGTGGCGCAGGAGCGCAGATGGCTGCAGTGAGTAATcacgtagtgtgtgtgttctatagTGCTGGTGTATCCGCAGATGGGAAAAGAACTAGACATTTGTTAGCGacggtatgtgtgtgtgtgtgtgtgtacagtcagctccagaattattggcaccctcggtaaagacagatttaaaaagaaaggttGTGATATAATGTTTTTGTGGTTAATCTCAGTGTGAAAGAAATcgaaactttatttatttatttatttatatatgttctTTACCCTGGGCAGCGATACTGTCCTGGGAACGCTAGAGGTGAGACGGGAATACATCCTGGGCACCATCCGtgtacactcactcacacctacaGGCATTTTAGCGTGGCCAGTTCATGTACCTacctgtttttgggaggtgggaggaaacctgagaacccagaggaaaccccacacagacacaggcagaACATgcacaactccacacagacagtcacctgagctcaggattgaacccccTGGGACCAAATTCTGACCTTTTAAattgaagtaaaataaaaatgtcaattattggcaccccttttCTCATGAACAGAATATAATTGATGTAAAGTTCTCGTTTGTATATCACCTTCTTAAGTTCACCTGAGTGTTTAGGAACTCTTAAGCGATCATCCCTGACATCCTGTTTTACTGGGGTATAAATACAAGGTGACACAAACCACATTTCTGTcatgccaataattctagagcTAAGGTTTGTACTTTCATATCGAACTCTTCTTTTCTGAGCAGAACTTTTTCAGTAGTTGGCTGCATTTAGGTTGGTGGTTTGCTTAGTTAATTTTGCTGAACTAGAACTTGATGTACTCTATGTACAATTTTTGGTGAAAAAAGGCAAGCGGTGATGTAGGGAAAGCGTGATTGTGCATATTTGAATATTGCGATATATCTAACCGATTTACAACACAAATTGTATCGTGTGTAAGATGTGCAGGTTCGTAGGAGTTGTAATGAACGAGAATTATTTTGTACGTATGAAGTTGAATCATGAAGCCCCACCGTCGGAAATATTCAGAAATTCATATGCTGCATTATCAGCTCTCTATTCAGCCACAAGGGGTcagcgtttaaaaaaaaaaaaaaaagaagcactcAACATCTTAACACTTCTCTTCtaaattattgaattattcTAAATTAATACAATTCACAAAGTGAGACTTTGGACATTTTATTTTGGATCTAGAAAGCATAGATCAGCTCAAGATATAAGAGGCAAGGTCAAAGTAATTTTtgtgtcttgttttgtttttgttttttttgt
>XM_034299002.1
AAACAAAATAAGCAGAGTGTAACTTTCGCTTGCGGAGCTAATACACTGTGTAGATTTGTTGCAGTGGAAGAAACGTCTCGGAGTGTTACATTATAGACacttgaagtgaagtgtGCTCCAGGTGAGGGCGCCACTCTgttctactctctctctctctctctctctctctctctccctctctctcttgcgGCTGACTGAAGCTCAGTGCTGCATCCTCCCTGTCTCTGCTTCCCCGTGGAGACGCCATGTCCTCCACGTCGTCCTGCTCCTCGTCGGGGGAGACGAGCCCGGAGGACGTTCCCCGAGGAGGAGGAACCATCCGTGTCTACCTCCCCAACAAACAGCGCACAGTGGTGAACGTGCGTCCAGGTCAGACGGTGCACGACAGTCTGGACAAAGCGCTCAAGGTGCGAGGCCTCACTCAGGACTGTTGCGCCGTTTTCCGCCTCCTCGAAGGTCGTAAAAGGCTGACAGAATGGAACACTGACATCACACCCCTCGTCGGAGAGGAGCTTCTTGTCGAGGTTTTGGACGACGTCCCCCTCACCATGCACAACTTCGTTCGTAAAACCTTCTTTAAGTTAGCGTACTGTGACTTCTGCCACAAGTTCCTGTTTAACGGCTTCCGGTGTCAGACGTGCGGCTACAAGTTCCACCAGCACTGCAGCAGCAAAGTGCCCACAGTCTGCGTGGACATGGACACCATGAAACGgtATGCAGGAGATTGTGCAACAGTCACTGGTGAAGTTGTGTCCGATCCTATCCCCGCTGGCATCCCTTTAACCCCTGAGCCTGCTGGTTCAGCGCTGCTCTCGCCAGCCTCGGCGTTCCACTTCCCCATGCCGGGAGGGGACGGTCAGTCTCTGCAGAGGCTTCGCTCCACCTCAACCCCCAACGTCCACATGGTCAGCACGCTGGGGCCTGGAGCGGCCAGCGTCATCGAGGAGGCATTAAAATCCAACAGCCCAATGgGACCAGAATCCTCTCCCAAACCCTCGACTAGTCCACCTCACCTTGGCTCTCCGGGTCGAAAACCACCCAAATCGCCCCCGGAGCGCAAACCGGCCCCCATCCTTGAcggaaaaaaggaaaggaatcAGCGTTACAGAGACTCGAGCTACTACTGGGAAGTGCCGTCGCACCAAGTGACCATGCAGAAGCGCATCGGCGCCGGCTCCTTTGGCACCGTCTTCAAGGGCAAGTGGCACGGAGACGTGGCCATCAAGATCCTGAAGGTGACAGAGCCGACGCCGGAGCAGCTGCAGGCCTTCAGGAATGAAATGCAGGTCCTGCGGAAGACGCGCCACGTCAACATCCTGCTGTTCATGGGCTTCATGACGAAGCCGCACTTCGCCATAATCACGCAGTGGTGCGAAGGCAGCAGCCTTTACCGCCACCTGCACGTCACCGAGACCAAATTCGACACCATGAGGCGCATCGACGTGGCGCGCCAGACGGCGCAGGGCATGGACTACCTTCACGCCAAGAACATCATTCATCGGGACCTGAAATCTAATAATATCTTCCTGCACGAGGGTTGGACGGTGAAGATCGGCGACTTCGGCTTGGCCACGGTGAAGTCTCGCTGGAGCGGCTCGCAGCAGGTGGAGCAGCCCAGCGGATCCATACTCTGGATGGCTCCGGAGGTGATCCGCATGCAGGACCCGAACCCTTACACCTTCCAGTCGGACGTGTACGGCTACGGCGTGGTGCTGTTCGAGCTCATGTCCGGCACGCTGCCTTACTCCAATATCAACAACCGCGACCAGATCATTTTCATGGTGGGTCGAGGCTACCTGTCACCAGACCTCAGCAAGCTGTACAGTAACTGCCCCAAGTCCATGAAACGTCTCATCATTGACTGTCTGAAATTCAAACAGGACGAAAGGCCGCTCTTTCCTCAGATCCTGGTGTCCATCGAGCAGGTGCAGGATCTCTTGCCCAAGATCGAGCGCAGCGCCTCGGAGCCGTCGCTGCACCGCGCCGTTCACGCTGAGGACCTGAACCCGCTGCTGCTGCACACCACACGCCTCCTGCCTCTGTGAAACCAGAAGATTCTGCACAAGATTCTGTCCTCcgcactcactacacactcacacactctctctctctcacacacacacacactctctcacacacacacacacattcctgctgTGCATTCCTTGTCTCCTTAACGCATCAGCAAAACTTTCCAGTCATTCCAGTCATTTCTCCGTGTGAACAAACGGTCCTCTGATAcgatttattcatattttattcttcCCTTTTGCAACCCGagagcatttatttttactctgaAATCCGTCACAAACTCGATTCGATTGTGGCCACATTCGCAGACGTAGAGAAACCTAAAGCGTTTCTGAGTTATAGTGATATTTCCGTTATGGGGATTTTGATCACATTTCTAATTAAACTCATTTCATTCATGTTTAGATGCGGGATTGCGAACGTCCGATTCTGCGTTTAGAAACACCAGTCGGTTTGCACTTTAATATTAGAAATCCATACACGACGAGCGAACACTACACGTTTTCTAAAGCACCAGTACCTTCCTGTCATGACTtagacatgtttaaaaaaattgcactcCTTCCCTTAAGCTAAGGCTTGATCAAGGCGGCTTCGTTAGCGTAGTCAGTTATGCAGTTTATTCTAGTAATCAGCATGTACCGTTGtgttaccatggtaacagaGCATTTAATCCTTGCACGTTTTAAAACCTTGGGACCAAGCAGCCAGAAATCGGTTTTTGTAACAAGGAGGAACGGGGGAAACGGAGCAGGTGGAATGAGGTTCCTGCAGATAAACCTTTCTTAGTCGCAGACTCGCCATCCTCTTAGGTGTTTTATAGGTAGCCGAGAGTTTTCACCGTATTACAGTAAAGAGCAAATTCCATTCAGAATGCACACATCACGTAACTAGCTATGTACAATTGTTTGTGCTGCCATGGCAACCGGCAGTTAGCTACAGATAGGAACGCCCCTTATAGAGACCAGTGTTAAATGACGTGAGGTTAGGAACGGACGCCGCTTTTCTTTGTTCGGTTCTTTGCATGCTGTCTAATCAAACAAGGGAGCAGGttagaaaacaggaagtagttatgtgtgaaaattttACCGTATCCCTCCCTCAGAAAACCTGTTCTACATAGCGACGATATATCGGTATGATGGTTTACGAAAAAATTCTGAAGGATAAAAGCGATCCTCTTGGGAACATGTTCTAGCAAAATAGCAACCACcttagcaacaccctagcaagcacatggaataccatagcaaccacttTAGCAACAACCTTGCAACACCCTAGCAAACACCTGGGATGTCATAGCAACCATCTAGCAACAACCTTGCAACACACTAGCAAACACTTGGAATGCCATAGCAACCATCTAGCAACAACCTTGCAACACACTAGCAAACACCTGGGATGCCATAGCAACCATCTAGCAACAACCTTACAACACACTAGCAAACACCTGGGATGCCATAGCAACCATCTAGCAACAACCTTGCAACACCCTAGCAAACACCTGGGATGCCATGATAAGCTTCGCaagtaattttaatttattttttttttgaggaaatgCACGTTGCTAGTGAACGTGTAGCTGTAGACAGATAACGCAGGGTAACATCAGTTAACGAGAAACgcagagaaaaaaatctttatggCCAGCAGGGTATCAGCGAGTCATCAGCAGTGTGTCCGGGTGATGATTTTTCAGTTAGCAGcgtgtacagtgtgtttcacGGGCTTGGCAGTCTAGCCGAGTACATTCCAGTTCAATCTGGACTGTGAAGCGGCACAGCGTGGTGGCGCAGGAGCGCAGATGGCTGCAGTGAGTAATcacgtagtgtgtgtgttctatagTGCTGGTGTATCCGCAGATGGGAAAAGAACTAGACATTTGTTAGCGacggtatgtgtgtgtgtgtgtgtgtacagtcagctccagaattattggcaccctcggtaaagacagatttaaaaagaaaggttGTGATATAATGTTTTTGTGGTTAATCTCAGTGTGAAAGAAATcgaaactttatttatttatttatttatatatgttctTTACCCTGGGCAGCGATACTGTCCTGGGAACGCTAGAGGTGAGACGGGAATACATCCTGGGCACCATCCGtgtacactcactcacacctacaGGCATTTTAGCGTGGCCAGTTCATGTACCTacctgtttttgggaggtgggaggaaacctgagaacccagaggaaaccccacacagacacaggcagaACATgcacaactccacacagacagtcacctgagctcaggattgaacccccTGGGACCAAATTCTGACCTTTTAAattgaagtaaaataaaaatgtcaattattggcaccccttttCTCATGAACAGAATATAATTGATGTAAAGTTCTCGTTTGTATATCACCTTCTTAAGTTCACCTGAGTGTTTAGGAACTCTTAAGCGATCATCCCTGACATCCTGTTTTACTGGGGTATAAATACAAGGTGACACAAACCACATTTCTGTcatgccaataattctagagcTAAGGTTTGTACTTTCATATCGAACTCTTCTTTTCTGAGCAGAACTTTTTCAGTAGTTGGCTGCATTTAGGTTGGTGGTTTGCTTAGTTAATTTTGCTGAACTAGAACTTGATGTACTCTATGTACAATTTTTGGTGAAAAAAGGCAAGCGGTGATGTAGGGAAAGCGTGATTGTGCATATTTGAATATTGCGATATATCTAACCGATTTACAACACAAATTGTATCGTGTGTAAGATGTGCAGGTTCGTAGGAGTTGTAATGAACGAGAATTATTTTGTACGTATGAAGTTGAATCATGAAGCCCCACCGTCGGAAATATTCAGAAATTCATATGCTGCATTATCAGCTCTCTATTCAGCCACAAGGGGTcagcgtttaaaaaaaaaaaaaaaagaagcactcAACATCTTAACACTTCTCTTCtaaattattgaattattcTAAATTAATACAATTCACAAAGTGAGACTTTGGACATTTTATTTTGGATCTAGAAAGCATAGATCAGCTCAAGATATAAGAGGCAAGGTCAAAGTAATTTTtgtgtcttgttttgtttttgttttttttgt
>XM_034299003.1
AATGCTATTCAGTTAGCTTTAGCTCTCTTAGCAGGTCAAGATAGCCGCCTAACTTAATCCCTTTCCGCCTCGGGAAGATGccgagtttttttcttttccggTGTGAACACATTTTTAAGGCTCCAGGTGAGGGCGCCACTCTgttctactctctctctctctctctctctctctctctccctctctctcttgcgGCTGACTGAAGCTCAGTGCTGCATCCTCCCTGTCTCTGCTTCCCCGTGGAGACGCCATGTCCTCCACGTCGTCCTGCTCCTCGTCGGGGGAGACGAGCCCGGAGGACGTTCCCCGAGGAGGAGGAACCATCCGTGTCTACCTCCCCAACAAACAGCGCACAGTGGTGAACGTGCGTCCAGGTCAGACGGTGCACGACAGTCTGGACAAAGCGCTCAAGGTGCGAGGCCTCACTCAGGACTGTTGCGCCGTTTTCCGCCTCCTCGAAGGTCGTAAAAGGCTGACAGAATGGAACACTGACATCACACCCCTCGTCGGAGAGGAGCTTCTTGTCGAGGTTTTGGACGACGTCCCCCTCACCATGCACAACTTCGTTCGTAAAACCTTCTTTAAGTTAGCGTACTGTGACTTCTGCCACAAGTTCCTGTTTAACGGCTTCCGGTGTCAGACGTGCGGCTACAAGTTCCACCAGCACTGCAGCAGCAAAGTGCCCACAGTCTGCGTGGACATGGACACCATGAAACGgtATGCAGGAGATTGTGCAACAGTCACTGGTGAAGTTGTGTCCGATCCTATCCCCGCTGGCATCCCTTTAACCCCTGAGCCTGCTGGTTCAGCGCTGCTCTCGCCAGCCTCGGCGTTCCACTTCCCCATGCCGGGAGGGGACGGTCAGTCTCTGCAGAGGCTTCGCTCCACCTCAACCCCCAACGTCCACATGGTCAGCACGCTGGGGCCTGGAGCGGCCAGCGTCATCGAGGAGGCATTAAAATCCAACAGCCCAATGgGACCAGAATCCTCTCCCAAACCCTCGACTAGTCCACCTCACCTTGGCTCTCCGGGTCGAAAACCACCCAAATCGCCCCCGGAGCGCAAACCGGCCCCCATCCTTGAcggaaaaaaggaaaggaatcAGCGTTACAGAGACTCGAGCTACTACTGGGAAGTGCCGTCGCACCAAGTGACCATGCAGAAGCGCATCGGCGCCGGCTCCTTTGGCACCGTCTTCAAGGGCAAGTGGCACGGAGACGTGGCCATCAAGATCCTGAAGGTGACAGAGCCGACGCCGGAGCAGCTGCAGGCCTTCAGGAATGAAATGCAGGTCCTGCGGAAGACGCGCCACGTCAACATCCTGCTGTTCATGGGCTTCATGACGAAGCCGCACTTCGCCATAATCACGCAGTGGTGCGAAGGCAGCAGCCTTTACCGCCACCTGCACGTCACCGAGACCAAATTCGACACCATGAGGCGCATCGACGTGGCGCGCCAGACGGCGCAGGGCATGGACTACCTTCACGCCAAGAACATCATTCATCGGGACCTGAAATCTAATAATATCTTCCTGCACGAGGGTTGGACGGTGAAGATCGGCGACTTCGGCTTGGCCACGGTGAAGTCTCGCTGGAGCGGCTCGCAGCAGGTGGAGCAGCCCAGCGGATCCATACTCTGGATGGCTCCGGAGGTGATCCGCATGCAGGACCCGAACCCTTACACCTTCCAGTCGGACGTGTACGGCTACGGCGTGGTGCTGTTCGAGCTCATGTCCGGCACGCTGCCTTACTCCAATATCAACAACCGCGACCAGATCATTTTCATGGTGGGTCGAGGCTACCTGTCACCAGACCTCAGCAAGCTGTACAGTAACTGCCCCAAGTCCATGAAACGTCTCATCATTGACTGTCTGAAATTCAAACAGGACGAAAGGCCGCTCTTTCCTCAGATCCTGGTGTCCATCGAGCAGGTGCAGGATCTCTTGCCCAAGATCGAGCGCAGCGCCTCGGAGCCGTCGCTGCACCGCGCCGTTCACGCTGAGGACCTGAACCCGCTGCTGCTGCACACCACACGCCTCCTGCCTCTGTGAAACCAGAAGATTCTGCACAAGATTCTGTCCTCcgcactcactacacactcacacactctctctctctcacacacacacacactctctcacacacacacacacattcctgctgTGCATTCCTTGTCTCCTTAACGCATCAGCAAAACTTTCCAGTCATTCCAGTCATTTCTCCGTGTGAACAAACGGTCCTCTGATAcgatttattcatattttattcttcCCTTTTGCAACCCGagagcatttatttttactctgaAATCCGTCACAAACTCGATTCGATTGTGGCCACATTCGCAGACGTAGAGAAACCTAAAGCGTTTCTGAGTTATAGTGATATTTCCGTTATGGGGATTTTGATCACATTTCTAATTAAACTCATTTCATTCATGTTTAGATGCGGGATTGCGAACGTCCGATTCTGCGTTTAGAAACACCAGTCGGTTTGCACTTTAATATTAGAAATCCATACACGACGAGCGAACACTACACGTTTTCTAAAGCACCAGTACCTTCCTGTCATGACTtagacatgtttaaaaaaattgcactcCTTCCCTTAAGCTAAGGCTTGATCAAGGCGGCTTCGTTAGCGTAGTCAGTTATGCAGTTTATTCTAGTAATCAGCATGTACCGTTGtgttaccatggtaacagaGCATTTAATCCTTGCACGTTTTAAAACCTTGGGACCAAGCAGCCAGAAATCGGTTTTTGTAACAAGGAGGAACGGGGGAAACGGAGCAGGTGGAATGAGGTTCCTGCAGATAAACCTTTCTTAGTCGCAGACTCGCCATCCTCTTAGGTGTTTTATAGGTAGCCGAGAGTTTTCACCGTATTACAGTAAAGAGCAAATTCCATTCAGAATGCACACATCACGTAACTAGCTATGTACAATTGTTTGTGCTGCCATGGCAACCGGCAGTTAGCTACAGATAGGAACGCCCCTTATAGAGACCAGTGTTAAATGACGTGAGGTTAGGAACGGACGCCGCTTTTCTTTGTTCGGTTCTTTGCATGCTGTCTAATCAAACAAGGGAGCAGGttagaaaacaggaagtagttatgtgtgaaaattttACCGTATCCCTCCCTCAGAAAACCTGTTCTACATAGCGACGATATATCGGTATGATGGTTTACGAAAAAATTCTGAAGGATAAAAGCGATCCTCTTGGGAACATGTTCTAGCAAAATAGCAACCACcttagcaacaccctagcaagcacatggaataccatagcaaccacttTAGCAACAACCTTGCAACACCCTAGCAAACACCTGGGATGTCATAGCAACCATCTAGCAACAACCTTGCAACACACTAGCAAACACTTGGAATGCCATAGCAACCATCTAGCAACAACCTTGCAACACACTAGCAAACACCTGGGATGCCATAGCAACCATCTAGCAACAACCTTACAACACACTAGCAAACACCTGGGATGCCATAGCAACCATCTAGCAACAACCTTGCAACACCCTAGCAAACACCTGGGATGCCATGATAAGCTTCGCaagtaattttaatttattttttttttgaggaaatgCACGTTGCTAGTGAACGTGTAGCTGTAGACAGATAACGCAGGGTAACATCAGTTAACGAGAAACgcagagaaaaaaatctttatggCCAGCAGGGTATCAGCGAGTCATCAGCAGTGTGTCCGGGTGATGATTTTTCAGTTAGCAGcgtgtacagtgtgtttcacGGGCTTGGCAGTCTAGCCGAGTACATTCCAGTTCAATCTGGACTGTGAAGCGGCACAGCGTGGTGGCGCAGGAGCGCAGATGGCTGCAGTGAGTAATcacgtagtgtgtgtgttctatagTGCTGGTGTATCCGCAGATGGGAAAAGAACTAGACATTTGTTAGCGacggtatgtgtgtgtgtgtgtgtgtacagtcagctccagaattattggcaccctcggtaaagacagatttaaaaagaaaggttGTGATATAATGTTTTTGTGGTTAATCTCAGTGTGAAAGAAATcgaaactttatttatttatttatttatatatgttctTTACCCTGGGCAGCGATACTGTCCTGGGAACGCTAGAGGTGAGACGGGAATACATCCTGGGCACCATCCGtgtacactcactcacacctacaGGCATTTTAGCGTGGCCAGTTCATGTACCTacctgtttttgggaggtgggaggaaacctgagaacccagaggaaaccccacacagacacaggcagaACATgcacaactccacacagacagtcacctgagctcaggattgaacccccTGGGACCAAATTCTGACCTTTTAAattgaagtaaaataaaaatgtcaattattggcaccccttttCTCATGAACAGAATATAATTGATGTAAAGTTCTCGTTTGTATATCACCTTCTTAAGTTCACCTGAGTGTTTAGGAACTCTTAAGCGATCATCCCTGACATCCTGTTTTACTGGGGTATAAATACAAGGTGACACAAACCACATTTCTGTcatgccaataattctagagcTAAGGTTTGTACTTTCATATCGAACTCTTCTTTTCTGAGCAGAACTTTTTCAGTAGTTGGCTGCATTTAGGTTGGTGGTTTGCTTAGTTAATTTTGCTGAACTAGAACTTGATGTACTCTATGTACAATTTTTGGTGAAAAAAGGCAAGCGGTGATGTAGGGAAAGCGTGATTGTGCATATTTGAATATTGCGATATATCTAACCGATTTACAACACAAATTGTATCGTGTGTAAGATGTGCAGGTTCGTAGGAGTTGTAATGAACGAGAATTATTTTGTACGTATGAAGTTGAATCATGAAGCCCCACCGTCGGAAATATTCAGAAATTCATATGCTGCATTATCAGCTCTCTATTCAGCCACAAGGGGTcagcgtttaaaaaaaaaaaaaaaagaagcactcAACATCTTAACACTTCTCTTCtaaattattgaattattcTAAATTAATACAATTCACAAAGTGAGACTTTGGACATTTTATTTTGGATCTAGAAAGCATAGATCAGCTCAAGATATAAGAGGCAAGGTCAAAGTAATTTTtgtgtcttgttttgtttttgttttttttgt

Function

symbol description
araf Enables SMAD binding activity. Acts upstream of or within negative regulation of nodal signaling pathway and pathway-restricted SMAD protein phosphorylation. Predicted to be active in cytosol and mitochondrion. Is expressed in head. Orthologous to human ARAF (A-Raf proto-oncogene, serine/threonine kinase).

NR:

description
serine/threonine-protein kinase A-Raf-like

GO:

id name namespace
GO:0060389 pathway-restricted SMAD protein phosphorylation biological_process
GO:0035556 intracellular signal transduction biological_process
GO:1900108 negative regulation of nodal signaling pathway biological_process
GO:0005057 obsolete signal transducer activity, downstream of receptor molecular_function
GO:0005524 ATP binding molecular_function
GO:0046872 metal ion binding molecular_function
GO:0046332 SMAD binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG:

id description
K08845 ARAF, ARAF1; A-Raf proto-oncogene serine/threonine-protein kinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026939936.2 False 5084 mRNA 0.48 16 3229104 3242841
XM_034299002.1 False 5138 mRNA 0.48 16 3229104 3242764
XM_034299003.1 True 5143 mRNA 0.48 16 3229104 3242591

Neighbor

gene id symbol gene type direction distance location
tbx3b tbx2a,LOC108255409 coding downstream 29046 3168278 ~ 3200058 (-)
hdr NA coding downstream 427550 2793455 ~ 2801554 (-)
LOC113542230 LOC108255680 coding downstream 437530 2786249 ~ 2791574 (-)
LOC113542232 LOC108255682,LOC108434266,LOC108417841,LOC108415785,LOC107715185,LOC107581013,LOC107745493 coding downstream 443167 2785439 ~ 2785937 (-)
zgc:153409 LOC106958509,LOC106963510,LOC107723971,LOC107690788,LOC107671222 coding downstream 444030 2784561 ~ 2785074 (-)
klf9 klf9 coding upstream 64327 3307168 ~ 3312856 (-)
cemip2 tmem2 coding upstream 268274 3511115 ~ 3546480 (-)
abhd17b abhd17b,LOC103022021,LOC107599913,LOC107592319,LOC107672759 coding upstream 309678 3552519 ~ 3568775 (-)
LOC113542282 si:dkey-96l17.6,LOC108255364,LOC108434467 coding upstream 422131 3664972 ~ 3673856 (-)
wu:fa19b12 NA coding upstream 632041 3874882 ~ 3879761 (-)
G348669 NA non-coding downstream 5605 3223300 ~ 3223499 (-)
G348662 NA non-coding downstream 21270 3205505 ~ 3207834 (-)
G348663 NA non-coding downstream 23820 3204091 ~ 3205284 (-)
G348661 NA non-coding downstream 30208 3198682 ~ 3198896 (-)
G348640 NA non-coding downstream 78688 3150001 ~ 3150416 (-)
G348678 NA non-coding upstream 13269 3256110 ~ 3259052 (-)
G348681 NA non-coding upstream 19428 3262269 ~ 3264822 (-)
G348695 NA non-coding upstream 72533 3315374 ~ 3315944 (-)
G348906 NA non-coding upstream 307736 3550577 ~ 3551672 (-)
LOC117595903 NA non-coding upstream 318825 3561666 ~ 3607376 (-)
tm2d2 tm2d2 other downstream 62850 3156042 ~ 3166254 (-)
unc5db unc5d,LOC108434269 other downstream 264215 2811544 ~ 2964889 (-)
LOC113542231 LOC108255681,LOC107659283,LOC107721542,LOC108434264,LOC107587464,LOC107709859 other downstream 397425 2773722 ~ 2831679 (-)
G348491 LOC108255682,LOC108434266,LOC108419634,LOC108415785,LOC108417841,LOC107715185,LOC107690133,LOC107745493 other downstream 443208 2784677 ~ 2785896 (-)
zmat4a zmat4,LOC108434259,LOC107594996,LOC106580521 other downstream 564622 2601534 ~ 2664482 (-)
trpm3 trpm3,LOC108434489,LOC108255677,LOC107595026,LOC107673407,LOC107672763,LOC106928040,LOC106941846 other upstream 76944 3319785 ~ 3387730 (-)
trpm6 LOC108255945,LOC108438703 other upstream 589244 3832085 ~ 3879948 (-)
carnmt1 carnmt1 other upstream 639175 3882016 ~ 4204104 (-)
G349584 ung other upstream 1296442 4539283 ~ 4539831 (-)
hip1rb hip1r,LOC108255864 other upstream 2005807 5248648 ~ 5327552 (-)

Expression


Co-expression Network