LOC117595914


Basic Information

Item Value
gene id LOC117595914
gene name NA
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047618.1
NCBI id CM018564.1
chromosome length 20251756
location 95456 ~ 116505 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_034298969.1
AAGACGAGGCTCAGCAGTGTTCAGCAGCAGTCTGGCATTAATGTAGCTTTTATTCCGCtgatactcagtgtgtgtgtgcttgtggaTTTATTCTGCACTTCAGGGGTTTTGTTTCTCTTCATCGGTGTGAACTGTTTCTTATCCGGACATGTGGAGCTACACACTTCTGTTCGGGCTGCTCATTTTCACCATTGCTGCCACTGTGTCCGGTGAACGTTCTGTAACAGCCAAACTTCATCACCCTGCTACTCTCACCTGTGACTGGAAATGTCCTGGTTCACTCAAATGGGTTAAATTTCATAAACGAGGTAATATTCTGGCTCGGTGTGATCAAACATCATGCAGGTCAGAGGAGAGATTTAACATCTCTCATGATCAGTACCTGAAGGGGAATCCACATCTCACCATCACTGCAGCTGATTACAGTACGAGAGGTTTATACACGTGTCAGTGTGATGGCAAAGACGTCTGTGACGTGCGGCTCGTCATTGAGACTCAAGTGATGAGCCGTGAGATTACCCCAGGCGAGCCCATAGACGTGTACTTACCCCTCACTGACCTGGTGGAGGTGAGTTTTACTGCGAGTGATGCTGCACAACCATCAGACCTGCAGATCTGCACCGTGGACAATGAGAAGATACAGTGCAGTCCAGATTATAAAGAGAGAGCGTCTCGCTTCAACACTCTTCAGATTAAAGATGGACATGTCTCTGACAGTGGCAGCTACACAGTACGGGATATAGTGTACAATGAGATTATAGCCATCGTAAAGGTCCATGTGAGAGaagACCAGCCAGGTTCGGACATCAGGCAGGAGGGAGGTGTACCAGCGTGTGGGATTGtactgatgctgctgctgctgctggttgTAGCTGCGTTTGTGTTCCTGATGGTGATGTATGTGCGTCTGAGGAGAGAGAATCAGCAGCTCCGTGAGAAAGATGAAAGGAACGGACACGAGCTGCCCCTAATGAATGGAAATGCTAACCATGATCCAGGAGAAGAGCAGGACTGAGTACACACTGAGCTTACTGAACccacaaacactgaacactattctattataataaaatctttagaatagaatagaagagCTTTATTGTGCTGCACGATCATAGTGAAAGTAAGTTTGAATTTCCTGCTGTTACATGATGGAGAATATGTCAGTAATGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_034298969.1 True 1175 mRNA 0.46 5 95456 116505

Neighbor

gene id symbol gene type direction distance location
LOC113525747 NA coding downstream 3587 86459 ~ 91869 (-)
LOC113524950 NA coding downstream 15106 73680 ~ 80350 (-)
paip1 paip1 coding downstream 23972 61601 ~ 71484 (-)
LOC117595913 NA coding upstream 2677 119182 ~ 122661 (-)
LOC117595912 NA coding upstream 10485 126990 ~ 134539 (-)
LOC113528268 NA coding upstream 44515 161020 ~ 184551 (-)
LOC113528265 NA coding upstream 104924 221429 ~ 226704 (-)
mybbp1a mybbp1a coding upstream 122312 238817 ~ 254544 (-)
G347634 NA non-coding downstream 60678 17440 ~ 34778 (-)
G347652 NA non-coding upstream 3804 120309 ~ 138813 (-)
G347623 NA non-coding upstream 58518 175023 ~ 206293 (-)
G347703 NA non-coding upstream 212409 328914 ~ 329608 (-)
G347704 NA non-coding upstream 216737 333242 ~ 333755 (-)
G347672 NA non-coding upstream 237822 354327 ~ 355340 (-)
LOC117595978 NA other upstream 1693 118198 ~ 149806 (-)
LOC117595911 LOC108255570 other upstream 76044 192549 ~ 201990 (-)
LOC113528266 NA other upstream 88975 205480 ~ 210705 (-)
LOC117595925 NA other upstream 114020 230525 ~ 237272 (-)
LOC113528009 atp5i,atp5ib,atp5ia,LOC107703581 other upstream 247501 364006 ~ 367739 (-)

Expression


Co-expression Network