LOC113525747


Basic Information

Item Value
gene id LOC113525747
gene name NA
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047618.1
NCBI id CM018564.1
chromosome length 20251756
location 86459 ~ 91869 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_034298970.1
CGtagttgtgttttaaaaaaacaaaaccagacGAGGCTCAGTGTTGAACAGGAAATCGAGTTGAATctgcagctgaacacacactttaGATCCTCACTCTCTCTAACTCAAACACAGCTTTCCTCCTCTCAGCCATGTGAGCTTCAGCAGGAGTCTGGGATTAATGTAGCTTTTATTCCGCtgatactcagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcttgtggaTTTATTGTGCACTTCAGGGGATTGTTTCTGTCTGTGAGAGTAAAGTGGATGTTGTTTCTCTTTAAGaCATGTGGAGCTACACACTTCTGTTCGGGCTGCAGATTTTCACCTTTGCTGCCACTGTGTCTGGTGAACGTTCTGTAACAGCCAAACTTCATCACCCTGCTACTCTCACCTGTGACTGGAAATGTCCTGGTTTGCTCAAATGGAGTTTCAAGTTTCATACGATTGTGGCTCGGTGTGATCAGACATCATGCAGGTCAGAGGAGAGATTTAACATCTCTCATGATCAGTACCTGAAGGGGAATCCACATCTCACCATCACTGCAGCTGATTACAGTACGAGAGGTTTATACACGTGTCAGTGTGATGGCAAAGACGTCTGTGACGTGCGGCTCGTCATTGAGACTCAAGTGATGAGCCGTGAGATTACCCCAGGCGAGCCCATAAACGTGTACTTACCCCTCACTGACCGGGTGGAGGTGAGTTTTACTGCGAGTGATGCTGCACAACCATCAGACCTGCAGATCTGCACCGTGGACAACGAGAAGATACAGTGCAGTCCAGATTATAAAGAGAGAGCATCTCGCTTCAACACTCTTCAGATTAAAGCTGGAAACGTCTCTGACAGTGGCAGCTACACAGTACGGGATGTAGTGAATGATGAGACTTTAGCCATCTTAAAGGTCCATATGAGAGaagACCAGCCAGGTTCGGACATCAGGCAGGAGGGAGGTGTACCAGCGTGTGGGATTGtactgatgctgctgctgctgcttgtaGCTGCGTTTGTGTTCCTGATGGTGATGTATGTGCGTCTGAGGAGAGAGAATCAGCAGCTCCGTGAGAAAGATGAAAGGAACGGACACGAGCTGCCCCTAATGAATGGAAATGCTAACCATGATCCAGGAGAAGAGCAGAACTGAGTACACACTGAGCTTACTGAACccacaaacactg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_034298970.1 True 1191 mRNA 0.48 5 86459 91869

Neighbor

gene id symbol gene type direction distance location
LOC113524950 NA coding downstream 6109 73680 ~ 80350 (-)
paip1 paip1 coding downstream 14975 61601 ~ 71484 (-)
LOC117595914 NA coding upstream 3587 95456 ~ 116505 (-)
LOC117595913 NA coding upstream 27313 119182 ~ 122661 (-)
LOC117595912 NA coding upstream 35121 126990 ~ 134539 (-)
LOC113528268 NA coding upstream 69151 161020 ~ 184551 (-)
LOC113528265 NA coding upstream 129560 221429 ~ 226704 (-)
G347634 NA non-coding downstream 51681 17440 ~ 34778 (-)
G347652 NA non-coding upstream 28440 120309 ~ 138813 (-)
G347623 NA non-coding upstream 83154 175023 ~ 206293 (-)
G347703 NA non-coding upstream 237045 328914 ~ 329608 (-)
G347704 NA non-coding upstream 241373 333242 ~ 333755 (-)
G347672 NA non-coding upstream 262458 354327 ~ 355340 (-)
G347622 NA other upstream 3494 95363 ~ 121111 (-)
LOC117595978 NA other upstream 26329 118198 ~ 149806 (-)
LOC117595911 LOC108255570 other upstream 100680 192549 ~ 201990 (-)
LOC113528266 NA other upstream 113611 205480 ~ 210705 (-)
LOC117595925 NA other upstream 138656 230525 ~ 237272 (-)

Expression


Co-expression Network