erap1b (LOC108255537,LOC108255538,LOC108434503,LOC108434502,LOC107752503,LOC108434504)


Basic Information

Item Value
gene id erap1b
gene name LOC108255537,LOC108255538,LOC108434503,LOC108434502,LOC107752503,LOC108434504
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047618.1
NCBI id CM018564.1
chromosome length 20251756
location 1951629 ~ 1968139 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_034299248.1
gtcgCGCGAGTTTCCCATGATGCATTGGGTTTGCGcggttttattttcactttcgTTCTCTCGCCCAGTGAGCGGTTTGTTCCGAGGATCTGGGAGAAAACATTAATGACAAAGCAGTTCCTGTAGAACATGGCCCTCCTGGTGCTCCTCCTGTGTTTGTGCTCCGTGTCATCGTCTTGTACTGCAGTGACGCAAGCCAGAGAAGAAACCGAGTCCTCCTTCCCAACATCGACCAGCGGAGAGACGTTCCCCTGGAACAAGATGAGGCTTCCAGAGACCGTCTCTCCGTTTCATTACACTCTCCTCATCCACCCCAACCTCACCAGCCTCGACTTCACAGGGAGAGTGAAGATCCGAGTGGACGTCctccaggacacacacaccGTCGTCCTCCACAGCAAGGAGCTCAACATCTCCAGAGCCGTTCTCCGCAGTTTGGCTGAAGGTCAGAGCCAGGCTCTCAGGGTGCTGGAGTATCCGGCCTACCAGCAGATCGCTCTCATCAGTGAACACATGGTGCTGAGGAGAGGAAGTGTGTACGTCATCGAGCTGGAGTTTGCAGCCAAACTGTCCGAGAGCTTCCACGGTTTATATAAAAGCACGTACCGCTCCAGTGATGGAGAGGAACGGGTGCTGGCCTCCACACAGTTTGAGCCGACGAGCGCGCGAGCAGCTTTCCCCTGTTTCGATGAACCTGCATTCAAAGCCAACTTCTCTATTCACATTCGCCGTGAGAGTAGACACATCACCATCTCCAACATGCCCAAGCTGAGGACGCTGGCTCTCCCAGGCGGTCTGTTTGAGGATCAGTTTGACGAGACTGTGAAGATGAGCACCTACCTGGTGGCCTTCATCGTGTGTGACTTCCTGTCTATCAGCAAACACACTCAGCATGGAGTCGAGATCTCGGTGTACGCTGTACCTGAGAAGATAAAGCAGGCCGAGTTCGCGCTGGACGCTGCAGTGAAGCTGCTGGACTTCTACGATGATTACTTTGACATTCCCTACCCTCTGCCTAAACAAGATCTGGCTGCAATCCCGGACTTCCAGTCAGGTGCTATGGAGAACTGGGGTTTGACCACGTACAGGGAGTCGGCTCTGCTCTTTGACCCCCACAAGTCCTCGGCCTCCGACAAGCTGGGCATCACCATGATCATCGCACACGAGCTCGCTCATCAGTGGTTCGGTAATCTGGTCACGATGCAGTGGTGGAATGATCTCTGGCTGAACGAGGGCTTTGCTAAGTTCATGGAGTTTGTGTCTGTGAACATCACCAACCCCGAGCTGCAAGTGGAGGACTATTTCCTTGAGAAGTGCTTCGAGGCGATGGAGGTAGACTGTTTAAGCTCCTCTCACCCCGTGTCCACCCCCGTGGAGAACCCGGCTCAGATACAGGAGATGTTCGATGACGTGTCTTACGACAAGGGTGCATGTATCCTGCACATGCTGAGGGAGTTCCTGAGCCCTGACGTATTTAAGGTGGGGATTGTTGCCTACCTGAAACGCTACAGCTACCAGAACACCGTCAACACACACCTGTGGGAGAGTCTGACCGCTAAGCAGCACTCTGAAGACGAGGTGGACGTCAGGGCGATGATGGAGACGTGGACCCTGCAGGAAGGCTTCCCGCTCATCACGGTGGAGGTCAGAGGTCGTGAAGTGCGCCTGAGTCAGGAGCGATACCTGAAGGGCGAGGACTCGTCCCAAACCTCTGGATTTCTGTGGCACGTTCCTCTGACGTACGTCACCAGCAGCTCGAGCACAGTGCATCGCTTCCTGCTGAAGACTAAGAcagATGTGCTGTACCTGCCCGAGGAAGTGGACTGGATCAAGTTTAACGTGGACATGAGTGGATATTACATTGTCCATTACGAGGGCTCGGGCTGGGACGACCTCATCACTTTGCTCAATCACAACCACACGGCTCTGAGCAGCAATGATCGGGCCAGCCTCATCAATAATGCCTTCCAGTTGGTCAGCGTGGGTAAGCTGCCACTGGACAAAGCCCTGGACCTGTCGCTATATCTGAGTCGGGAGACTGAGATCATGCCTGTGACGCAGGGCTTCAGTGAGCTCGTGCCACTTTACAAGTTGATGGAGAAGAGGGACACACTGGAGGTGCTGGAGAACCAGATGAAGAGCTACATCGTGCAACTGTTCCGCAAGCTCATTGATCAGCAGGTGTGGAGTGATGATGGATCGGTGTCTCAGAGAATGCTGCGCAGTTATCTGCTCCTGTTTGCGTGTGTGAGGGATCACCCGCCCTGCGTCTCGACCGCCAGCGAGCTCTTCAACAAGTGGAAGGAGTCTGATGGCAAaatgagTCTTCCTAACGATGTGAGTCTGGCAGTATTTGCGGTCGGGGCTCGCACCGAGGAAGGATGGAACTTCCTGTTTGAGAAGTACCGTGAAACAATCTACACTTCTCTGAAGAGCCGGATCAAGTCGGCCCTCTCCATCACTCCTCTCGCTCACAAACTGAAATGGATGATGGAGCAGAGTTTGGAGGGATCGGTGATGAAGACACAGGACCTGCCGTATGTCGTGGTGTCCATCAGTAGGAACCCTAAAGGTTATAAACACACCTGGGACTTCCTGAGGGCAAACTGGGACTCGCTGGTGAAGAAgTTCGACCTCGGGTCCCACTCCATAGCGCACATGGTGACAGGCGTGACCAGCCAGTACTCCACCAGAGAGAAGCTGGAGGAGATTCGCAGCTTCTTCGGTTCTCTGAGTGCCGAGACGGGCGCTGAGCTGAGGTGCATCCAGCAAGCGCTGGAGAATGTGGAGGAGAACATCCGATGGATGGACAAGAACCTGCCCCTGCTGCAGGCCTGGCTGGATAAGAACCATCTGGAGCCACAGAAGCGCTATGACTTGCACACTGACCTGTGAAGATCCAAAATCAGCCAGTGCCTCGTCACCTGCCTGATCAAGGTCctgaaacataaacagaaaatagtgaggggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
>XM_034299249.1
ATTGTATAtgatttcagtgtttcagtcgCGCGAGTTTCCCATGATGCATTGGGTTTGCGcggttttattttcactttcgTTCTCTCGCCCAGTGAGCGGTTTGTTCCGAGGATCTGGGAGAAAACATTAATGACAAAGTTCCTGTAGAACATGGCCCTCCTGGTGCTCCTCCTGTGTTTGTGCTCCGTGTCATCGTCTTGTACTGCAGTGACGCAAGCCAGAGAAGAAACCGAGTCCTCCTTCCCAACATCGACCAGCGGAGAGACGTTCCCCTGGAACAAGATGAGGCTTCCAGAGACCGTCTCTCCGTTTCATTACACTCTCCTCATCCACCCCAACCTCACCAGCCTCGACTTCACAGGGAGAGTGAAGATCCGAGTGGACGTCctccaggacacacacaccGTCGTCCTCCACAGCAAGGAGCTCAACATCTCCAGAGCCGTTCTCCGCAGTTTGGCTGAAGGTCAGAGCCAGGCTCTCAGGGTGCTGGAGTATCCGGCCTACCAGCAGATCGCTCTCATCAGTGAACACATGGTGCTGAGGAGAGGAAGTGTGTACGTCATCGAGCTGGAGTTTGCAGCCAAACTGTCCGAGAGCTTCCACGGTTTATATAAAAGCACGTACCGCTCCAGTGATGGAGAGGAACGGGTGCTGGCCTCCACACAGTTTGAGCCGACGAGCGCGCGAGCAGCTTTCCCCTGTTTCGATGAACCTGCATTCAAAGCCAACTTCTCTATTCACATTCGCCGTGAGAGTAGACACATCACCATCTCCAACATGCCCAAGCTGAGGACGCTGGCTCTCCCAGGCGGTCTGTTTGAGGATCAGTTTGACGAGACTGTGAAGATGAGCACCTACCTGGTGGCCTTCATCGTGTGTGACTTCCTGTCTATCAGCAAACACACTCAGCATGGAGTCGAGATCTCGGTGTACGCTGTACCTGAGAAGATAAAGCAGGCCGAGTTCGCGCTGGACGCTGCAGTGAAGCTGCTGGACTTCTACGATGATTACTTTGACATTCCCTACCCTCTGCCTAAACAAGATCTGGCTGCAATCCCGGACTTCCAGTCAGGTGCTATGGAGAACTGGGGTTTGACCACGTACAGGGAGTCGGCTCTGCTCTTTGACCCCCACAAGTCCTCGGCCTCCGACAAGCTGGGCATCACCATGATCATCGCACACGAGCTCGCTCATCAGTGGTTCGGTAATCTGGTCACGATGCAGTGGTGGAATGATCTCTGGCTGAACGAGGGCTTTGCTAAGTTCATGGAGTTTGTGTCTGTGAACATCACCAACCCCGAGCTGCAAGTGGAGGACTATTTCCTTGAGAAGTGCTTCGAGGCGATGGAGGTAGACTGTTTAAGCTCCTCTCACCCCGTGTCCACCCCCGTGGAGAACCCGGCTCAGATACAGGAGATGTTCGATGACGTGTCTTACGACAAGGGTGCATGTATCCTGCACATGCTGAGGGAGTTCCTGAGCCCTGACGTATTTAAGGTGGGGATTGTTGCCTACCTGAAACGCTACAGCTACCAGAACACCGTCAACACACACCTGTGGGAGAGTCTGACCGCTAAGCAGCACTCTGAAGACGAGGTGGACGTCAGGGCGATGATGGAGACGTGGACCCTGCAGGAAGGCTTCCCGCTCATCACGGTGGAGGTCAGAGGTCGTGAAGTGCGCCTGAGTCAGGAGCGATACCTGAAGGGCGAGGACTCGTCCCAAACCTCTGGATTTCTGTGGCACGTTCCTCTGACGTACGTCACCAGCAGCTCGAGCACAGTGCATCGCTTCCTGCTGAAGACTAAGAcagATGTGCTGTACCTGCCCGAGGAAGTGGACTGGATCAAGTTTAACGTGGACATGAGTGGATATTACATTGTCCATTACGAGGGCTCGGGCTGGGACGACCTCATCACTTTGCTCAATCACAACCACACGGCTCTGAGCAGCAATGATCGGGCCAGCCTCATCAATAATGCCTTCCAGTTGGTCAGCGTGGGTAAGCTGCCACTGGACAAAGCCCTGGACCTGTCGCTATATCTGAGTCGGGAGACTGAGATCATGCCTGTGACGCAGGGCTTCAGTGAGCTCGTGCCACTTTACAAGTTGATGGAGAAGAGGGACACACTGGAGGTGCTGGAGAACCAGATGAAGAGCTACATCGTGCAACTGTTCCGCAAGCTCATTGATCAGCAGGTGTGGAGTGATGATGGATCGGTGTCTCAGAGAATGCTGCGCAGTTATCTGCTCCTGTTTGCGTGTGTGAGGGATCACCCGCCCTGCGTCTCGACCGCCAGCGAGCTCTTCAACAAGTGGAAGGAGTCTGATGGCAAaatgagTCTTCCTAACGATGTGAGTCTGGCAGTATTTGCGGTCGGGGCTCGCACCGAGGAAGGATGGAACTTCCTGTTTGAGAAGTACCGTGAAACAATCTACACTTCTCTGAAGAGCCGGATCAAGTCGGCCCTCTCCATCACTCCTCTCGCTCACAAACTGAAATGGATGATGGAGCAGAGTTTGGAGGGATCGGTGATGAAGACACAGGACCTGCCGTATGTCGTGGTGTCCATCAGTAGGAACCCTAAAGGTTATAAACACACCTGGGACTTCCTGAGGGCAAACTGGGACTCGCTGGTGAAGAAgTTCGACCTCGGGTCCCACTCCATAGCGCACATGGTGACAGGCGTGACCAGCCAGTACTCCACCAGAGAGAAGCTGGAGGAGATTCGCAGCTTCTTCGGTTCTCTGAGTGCCGAGACGGGCGCTGAGCTGAGGTGCATCCAGCAAGCGCTGGAGAATGTGGAGGAGAACATCCGATGGATGGACAAGAACCTGCCCCTGCTGCAGGCCTGGCTGGATAAGAACCATCTGGAGCCACAGAAGCGCTATGACTTGCACACTGACCTGTGAAGATCCAAAATCAGCCAGTGCCTCGTCACCTGCCTGATCAAGGTCctgaaacataaacagaaaatagtgaggggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg

Function

NR:

description
endoplasmic reticulum aminopeptidase 1-like

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0008237 metallopeptidase activity molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K09604 ARTS1; adipocyte-derived leucine aminopeptidase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_034299248.1 False 3007 mRNA 0.54 18 1951629 1968115
XM_034299249.1 True 3028 mRNA 0.54 18 1951629 1968139

Neighbor

gene id symbol gene type direction distance location
rad17 rad17 coding downstream 44056 1901159 ~ 1907573 (-)
ccdc125 ccdc125 coding downstream 51565 1892268 ~ 1900064 (-)
fam151b fam151b coding downstream 59503 1886652 ~ 1892126 (-)
slc6a4b slc6a4b,LOC108255560,LOC108434249,LOC107595929,LOC107672619,LOC107654599,LOC107597334,LOC105014447 coding downstream 393105 1535595 ~ 1558524 (-)
LOC113528310 NA coding downstream 509437 1433006 ~ 1442192 (-)
rnf181 rnf181,LOC107595010,LOC107750183,LOC107672715,LOC107592411 coding upstream 188847 2156986 ~ 2163920 (-)
LOC113542577 NA coding upstream 196334 2164473 ~ 2166382 (-)
LOC113542514 NA coding upstream 201196 2169335 ~ 2178059 (-)
vamp8 vamp8,LOC107728749,LOC107656490,LOC107587315,LOC107594988,LOC103036711 coding upstream 223446 2191585 ~ 2199551 (-)
ncaph ncaph,LOC107709847 coding upstream 233577 2201716 ~ 2209741 (-)
G348103 NA non-coding downstream 8918 1805996 ~ 1942711 (-)
G348094 NA non-coding downstream 75873 1794830 ~ 1875756 (-)
G348092 NA non-coding downstream 80483 1790117 ~ 1871146 (-)
G348088 LOC108255559 non-coding downstream 85555 1785025 ~ 1866074 (-)
G347905 LOC108255614,LOC108255436,LOC108255578,LOC108255576,LOC108255573 non-coding downstream 184700 1763211 ~ 1766929 (-)
G348143 NA non-coding upstream 18044 1986183 ~ 1987047 (-)
G348147 NA non-coding upstream 65418 2033557 ~ 2033864 (-)
G348180 NA non-coding upstream 143524 2111663 ~ 2181860 (-)
G348200 NA non-coding upstream 173477 2141616 ~ 2142102 (-)
LOC117595926 NA non-coding upstream 274069 2242208 ~ 2242816 (-)
G348096 LOC108255538 other downstream 122984 1827898 ~ 1828645 (-)
LOC117595719 NA other downstream 240721 1450335 ~ 1710908 (-)
LOC113542373 NA other downstream 421235 1505639 ~ 1530394 (-)
LOC113524988 NA other downstream 582167 1356568 ~ 1369462 (-)
LOC113524981 LOC108255436,LOC108255434,LOC108255578,LOC108255576,LOC108255614,LOC108255573 other downstream 672762 1268309 ~ 1278867 (-)
arvcfb arvcf,arvcfb,LOC107673389,LOC107595013 other upstream 13915 1982054 ~ 2127645 (-)
G348145 NA other upstream 27763 1995902 ~ 1998470 (-)
LOC113542580 NA other upstream 211400 2179539 ~ 2231567 (-)
zmat4a zmat4,LOC108434259,LOC107594996,LOC106580521 other upstream 633395 2601534 ~ 2664482 (-)
LOC113542231 LOC108255681,LOC107659283,LOC107721542,LOC108434264,LOC107587464,LOC107709859 other upstream 805583 2773722 ~ 2831679 (-)

Expression


Co-expression Network