Item | Value |
---|---|
gene id | LOC117595977 |
gene name | NA |
gene type | non-coding |
species | striped catfish (Pangasianodon hypophthalmus) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_047618.1 |
NCBI id | CM018564.1 |
chromosome length | 20251756 |
location | 9603400 ~ 9606974 (-) |
genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XR_004577161.1 | True | 820 | lncRNA | 0.38 | 3 | 9603400 | 9606974 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
polr3g | polr3g,LOC107557435 | coding | downstream | 230781 | 9369976 ~ 9372619 (-) |
adgrv1 | adgrv1 | coding | downstream | 242519 | 9229961 ~ 9360881 (-) |
pmpca | pmpca | coding | downstream | 426938 | 9169861 ~ 9176462 (-) |
coq2 | coq2 | coding | downstream | 448711 | 9148049 ~ 9154689 (-) |
mboat4 | mboat4 | coding | downstream | 474936 | 9127011 ~ 9128464 (-) |
LOC113536918 | LOC108255830 | coding | upstream | 119421 | 9726395 ~ 9728449 (-) |
rasa1a | rasa1,LOC108443998,LOC106580138 | coding | upstream | 132037 | 9739011 ~ 9767469 (-) |
vcana | vcan | coding | upstream | 630662 | 10237636 ~ 10269049 (-) |
zgc:110626 | LOC108255345 | coding | upstream | 726452 | 10333426 ~ 10339194 (-) |
f2r | f2r | coding | upstream | 760421 | 10367395 ~ 10369658 (-) |
G352512 | NA | non-coding | downstream | 270429 | 9332766 ~ 9332971 (-) |
G352487 | NA | non-coding | downstream | 392870 | 9206428 ~ 9210530 (-) |
G352498 | LOC108255998 | non-coding | downstream | 402712 | 9196783 ~ 9200688 (-) |
G352491 | NA | non-coding | downstream | 418646 | 9182148 ~ 9184754 (-) |
LOC113536901 | NA | non-coding | downstream | 626512 | 8971632 ~ 8976888 (-) |
G352610 | NA | non-coding | upstream | 74055 | 9681029 ~ 9681798 (-) |
G352869 | NA | non-coding | upstream | 542283 | 10149257 ~ 10225339 (-) |
G352878 | NA | non-coding | upstream | 629910 | 10236884 ~ 10237277 (-) |
G352881 | NA | non-coding | upstream | 702311 | 10309285 ~ 10309632 (-) |
G352883 | NA | non-coding | upstream | 705613 | 10312587 ~ 10313356 (-) |
LOC113536894 | ttc16 | other | downstream | 553992 | 9040627 ~ 9049408 (-) |
sh2d3cb | sh2d3c | other | downstream | 948788 | 8640942 ~ 8654612 (-) |
malt1 | malt1 | other | downstream | 1017389 | 8570517 ~ 8586011 (-) |
hint2 | hint2,LOC102299676,LOC102195764,LOC102781852,LOC104963271 | other | downstream | 1046724 | 8553647 ~ 8556676 (-) |
card9 | card9 | other | downstream | 1995934 | 7602907 ~ 7607466 (-) |
LOC113536891 | NA | other | upstream | 168992 | 9775966 ~ 9814416 (-) |
iqgap2 | iqgap2,LOC107748460,LOC107565681,LOC107700055,LOC107561620,LOC107685248 | other | upstream | 763188 | 10370162 ~ 10411686 (-) |
LOC113536921 | LOC108255872 | other | upstream | 902097 | 10509071 ~ 10517205 (-) |
LOC113536823 | NA | other | upstream | 1124553 | 10731527 ~ 10748838 (-) |
mrpl41 | mrpl41 | other | upstream | 4115131 | 13722105 ~ 13724858 (-) |