XLOC_000563 (AL953855.1)


Basic Information

Item Value
gene id XLOC_000563
gene name AL953855.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 45170046 ~ 45170652 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00000982
GTCTCTTAactcagtggttcccaacctttttctttggggccccccccatgaacatatacaaacattggagcccccccaccatataaatacacacgcacgcacaaacatatgtactgtgtgtgtgtgtgtgtgtgtgtgtgtgtttgtgtttgtgtaatattaatatatagtaatatgtatagaaaatattaattaatcagttttaagttgtcttggccttcaataaaaccaaaatctaggtaggctttgtcatactgtctaatctttttcttcgcctctgaagaatcactgcatttacgtttgtctgccatttttgttttgattttgcctttacgacacgttgacaagcagattgcgcaagtgagcaaaatttaaataattatttaaagttatttatttgaattattttcactattatgttggaattttaagcacgcgtttagatttttatttatttttttgggctgctcgattttgggaaaaatcataatcacgattattttggtcataattgt

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000095108

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00000982 True 515 processed_transcript 0.34 2 45170046 45170652

Neighbor

gene id symbol gene type direction distance location
XLOC_000562 muc13a coding upstream 34168 45121393 ~ 45135878 (+)
XLOC_000561 si:ch211-151p13.8 coding upstream 73111 45080897 ~ 45096935 (+)
XLOC_000560 btr01 coding upstream 93612 45056371 ~ 45076434 (+)
XLOC_000559 dnaja1 coding upstream 155612 45002971 ~ 45014434 (+)
XLOC_000558 CU929294.1 coding upstream 172276 44983825 ~ 44997770 (+)
XLOC_000564 EVI5L coding downstream 46773 45217425 ~ 45282774 (+)
XLOC_000565 emp1 coding downstream 152490 45323142 ~ 45330451 (+)
XLOC_000566 si:ch211-243a20.3 coding downstream 181238 45351890 ~ 45366422 (+)
XLOC_000567 NA coding downstream 212952 45383604 ~ 45398821 (+)
XLOC_000568 NA coding downstream 474114 45644766 ~ 45648246 (+)
XLOC_000557 CU929294.2 non-coding upstream 197120 44968462 ~ 44972926 (+)
XLOC_000552 NA non-coding upstream 334308 44826320 ~ 44835738 (+)
XLOC_000545 NA non-coding upstream 516078 44647908 ~ 44653968 (+)
XLOC_000544 BX511158.1 non-coding upstream 579665 44590267 ~ 44590381 (+)
XLOC_000573 BX511120.1 non-coding downstream 597764 45768416 ~ 45768530 (+)
XLOC_000575 NA non-coding downstream 696388 45867040 ~ 45869497 (+)
XLOC_000579 NA non-coding downstream 862068 46032720 ~ 46153200 (+)

Expression


Co-expression Network