G368725


Basic Information

Item Value
gene id G368725
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047620.1
NCBI id CM018566.1
chromosome length 19313417
location 281439 ~ 281903 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU436824
gtgtgtgtgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgaggagaagtCGTACAGGGCGGTGACGGcggtgatgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtacctgaggaGAAGTCGTACAGGGCGGTGACGGcggtgatgagtgtgtgtgtgagtgtgtgtgtgtgtgtgtgagtgtgtgtgtgtgtgtg

Function

NR:

description
putative Na/K/2Cl cotransporter, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU436824 True 241 lncRNA 0.54 2 281439 281903

Neighbor

gene id symbol gene type direction distance location
rgs11 rgs11 coding downstream 3756 262153 ~ 277683 (-)
percc1 LOC108258685 coding downstream 37265 234899 ~ 244174 (-)
pdia2 LOC108258683 coding downstream 46463 228448 ~ 234976 (-)
rnf175 rnf175,LOC107665971,LOC107692639,LOC107714147 coding downstream 119458 154481 ~ 161981 (-)
fgb fgb,LOC107758871 coding downstream 151078 125530 ~ 130361 (-)
elfn1b elfn1b,LOC108258545,LOC108439159,LOC107722936,LOC107590768,LOC107702506,LOC107714143 coding upstream 70550 352453 ~ 408289 (-)
uncx4.1 LOC108258667 coding upstream 236701 518604 ~ 525065 (-)
chtf18 chtf18,LOC107725360 coding upstream 262355 544258 ~ 558212 (-)
plk1 plk1,LOC107722962,LOC107702528 coding upstream 300595 582498 ~ 589396 (-)
LOC113535779 cacng3,LOC108258515,LOC108439097 coding upstream 363573 645476 ~ 651428 (-)
G368713 NA non-coding downstream 36659 244177 ~ 244780 (-)
G368689 NA non-coding downstream 87525 185834 ~ 193914 (-)
G368685 NA non-coding downstream 96793 179182 ~ 184646 (-)
G368903 NA non-coding upstream 296690 578593 ~ 581860 (-)
G368912 NA non-coding upstream 389737 671640 ~ 673030 (-)
G368944 NA non-coding upstream 419181 701084 ~ 701288 (-)
G369130 NA non-coding upstream 589686 871589 ~ 875203 (-)
LOC117596193 NA non-coding upstream 984803 1266706 ~ 1270425 (-)
si:dkeyp-75b4.8 NA other downstream 54337 202654 ~ 227102 (-)
pmm2 pmm2,LOC107692644,LOC101469678,LOC102299325,LOC100707130,LOC102200931,LOC107082664 other upstream 2960 284863 ~ 289908 (-)
rasd3 LOC108258668 other upstream 309233 591136 ~ 592595 (-)
prkcba prkcb other upstream 371550 653453 ~ 702345 (-)
zgc:77849 zgc:77849,LOC108258689,LOC103038624,LOC108439082,LOC107722949,LOC107692663,LOC107590708 other upstream 587856 869759 ~ 948803 (-)
G369125 actb other upstream 629650 911553 ~ 915683 (-)

Expression


Co-expression Network