Gene
RNA
| Item | Value |
|---|---|
| gene id | G369618 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047620.1 |
| NCBI id | CM018566.1 |
| chromosome length | 19313417 |
| location | 1854440 ~ 1854653 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU437853 | True | 214 | lncRNA | 0.34 | 1 | 1854440 | 1854653 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| pard3ba | pard3b | coding | downstream | 115505 | 1618820 ~ 1738935 (-) |
| en1b | en1,eng1b,LOC108258368,LOC108437127,LOC102785987,LOC103355596 | coding | downstream | 336069 | 1512321 ~ 1518371 (-) |
| LOC113535431 | LOC108258373 | coding | downstream | 488534 | 1355723 ~ 1365906 (-) |
| slc5a10 | slc5a10 | coding | downstream | 608399 | 1204764 ~ 1246041 (-) |
| LOC113535776 | LOC108258401 | coding | downstream | 663892 | 1167628 ~ 1190548 (-) |
| LOC113535707 | LOC108258365,LOC108437114 | coding | upstream | 40395 | 1895048 ~ 1909374 (-) |
| klf7a | LOC108258322 | coding | upstream | 61010 | 1915663 ~ 1937075 (-) |
| LOC117596168 | NA | coding | upstream | 401768 | 2256421 ~ 2259148 (-) |
| LOC113535651 | NA | coding | upstream | 406636 | 2261289 ~ 2271653 (-) |
| LOC113535598 | LOC108258873 | coding | upstream | 428138 | 2282791 ~ 2331670 (-) |
| G369617 | NA | non-coding | downstream | 658 | 1853349 ~ 1853782 (-) |
| G369573 | NA | non-coding | downstream | 30936 | 1785553 ~ 1823504 (-) |
| G369596 | NA | non-coding | downstream | 49138 | 1803109 ~ 1805302 (-) |
| G369523 | NA | non-coding | downstream | 265790 | 1538077 ~ 1588650 (-) |
| G369506 | NA | non-coding | downstream | 279775 | 1492699 ~ 1574665 (-) |
| G369641 | NA | non-coding | upstream | 33851 | 1888504 ~ 1889374 (-) |
| G369663 | NA | non-coding | upstream | 164062 | 2018715 ~ 2021315 (-) |
| LOC117596194 | NA | non-coding | upstream | 260925 | 2115578 ~ 2144451 (-) |
| LOC117596130 | NA | non-coding | upstream | 331993 | 2186646 ~ 2187942 (-) |
| LOC117596129 | NA | non-coding | upstream | 344372 | 2199025 ~ 2245158 (-) |
| mdh1b | mdh1b | other | downstream | 21711 | 1824204 ~ 1832729 (-) |
| G369586 | NA | other | downstream | 59216 | 1776319 ~ 1795224 (-) |
| nrp2a | nrp2,LOC107556288,LOC107749808,LOC107750056 | other | downstream | 242774 | 1538453 ~ 1611666 (-) |
| G369242 | LOC108258881 | other | downstream | 577627 | 1276021 ~ 1276813 (-) |
| G369125 | actb | other | downstream | 938757 | 911553 ~ 915683 (-) |
| LOC113535702 | mx1 | other | upstream | 712104 | 2566757 ~ 2574471 (-) |
| LOC117596167 | NA | other | upstream | 988559 | 2843212 ~ 2853211 (-) |
| G370658 | NA | other | upstream | 2988676 | 4843329 ~ 4889381 (-) |
| LOC113537294 | NA | other | upstream | 3534251 | 5388904 ~ 5395012 (-) |
| LOC113537235 | son,LOC107698912,LOC107709257,LOC107698212,LOC107571887,LOC107555269,LOC565999 | other | upstream | 3675339 | 5529992 ~ 5547032 (-) |
