G370282


Basic Information

Item Value
gene id G370282
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047620.1
NCBI id CM018566.1
chromosome length 19313417
location 3229949 ~ 3230185 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU438629
GTTTGATGAGTCGGACGCCTTGGGTGAGttctttacagctttacttcacCTGTCTGAGTTCCTGAGGCACTGTTTAACCCTTTAATAACCCAGAAAACATGCTAACTCACTATTTTTATGCTAAGACTTGCTTACTAGTAGGGAATGGAAGTCAGGTGGCCTGCTAACATTTGGCTAAAAATGAACAAGAAGTATGATTTAGCTGTCTAAACTTCCCTGCTAAATTGCTAACCAACG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU438629 True 237 lncRNA 0.41 1 3229949 3230185

Neighbor

gene id symbol gene type direction distance location
gpc5a gpc5 coding downstream 59464 3083070 ~ 3170485 (-)
LOC117596192 NA coding downstream 337864 2874908 ~ 2892085 (-)
LOC113535482 LOC108258552,LOC108258557,LOC108258559,LOC108258561 coding downstream 391160 2833613 ~ 2838789 (-)
LOC113535483 LOC108258552,LOC108258561 coding downstream 402349 2823993 ~ 2827600 (-)
LOC113535756 LOC108258552 coding downstream 418340 2808317 ~ 2811609 (-)
LOC113535432 slitrk5,LOC108411062,LOC107558902,LOC107730401,LOC107677853,LOC107561275,LOC107698126 coding upstream 381534 3611719 ~ 3618120 (-)
LOC113535829 NA coding upstream 1227250 4457435 ~ 4457541 (-)
LOC117596196 NA coding upstream 1229132 4459317 ~ 4459423 (-)
LOC117596197 NA coding upstream 1231024 4461209 ~ 4461315 (-)
LOC117596198 NA coding upstream 1232923 4463108 ~ 4463214 (-)
G370272 NA non-coding downstream 4714 3225020 ~ 3225235 (-)
G370237 NA non-coding downstream 53004 3175144 ~ 3176945 (-)
G370207 NA non-coding downstream 157348 3069998 ~ 3072601 (-)
LOC117596157 NA non-coding downstream 177747 3039174 ~ 3052202 (-)
G370127 NA non-coding downstream 245019 2949421 ~ 2984930 (-)
G370308 NA non-coding upstream 235462 3465647 ~ 3465861 (-)
G370327 NA non-coding upstream 374169 3604354 ~ 3604585 (-)
G370372 NA non-coding upstream 546944 3777129 ~ 3777343 (-)
G370415 NA non-coding upstream 751525 3981710 ~ 3982940 (-)
G370416 NA non-coding upstream 752926 3983111 ~ 3983579 (-)
LOC117596167 NA other downstream 376738 2843212 ~ 2853211 (-)
LOC113535702 mx1 other downstream 655478 2566757 ~ 2574471 (-)
mdh1b mdh1b other downstream 1397220 1824204 ~ 1832729 (-)
G369586 NA other downstream 1434725 1776319 ~ 1795224 (-)
nrp2a nrp2,LOC107556288,LOC107749808,LOC107750056 other downstream 1618283 1538453 ~ 1611666 (-)
G370658 NA other upstream 1613144 4843329 ~ 4889381 (-)
LOC113537294 NA other upstream 2158719 5388904 ~ 5395012 (-)
LOC113537235 son,LOC107698912,LOC107709257,LOC107698212,LOC107571887,LOC107555269,LOC565999 other upstream 2299807 5529992 ~ 5547032 (-)
LOC113537623 NA other upstream 2711854 5942039 ~ 5952313 (-)
tpp2 tpp2,si:ch73-244f7.4,LOC107665822 other upstream 2785541 6015726 ~ 6033393 (-)

Expression


Co-expression Network