G371793


Basic Information

Item Value
gene id G371793
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047620.1
NCBI id CM018566.1
chromosome length 19313417
location 7183176 ~ 7183386 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU440456
aaacaccagtgacccagttccattggcagccatacatgcccatgccataacactgcctcgaCCATGtctgacagatgatgtggtatgctttggatcataagcccttcctttccttctccatactcttctcttcccatcattctggtacaagttaatcttgcatcagaactgggcaggctttttttttttttttagaggttttttagcaaag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU440456 True 211 lncRNA 0.43 1 7183176 7183386

Neighbor

gene id symbol gene type direction distance location
sugt1 sugt1,LOC104941757 coding downstream 1694 7156580 ~ 7181482 (-)
pcdh8 LOC108258318 coding downstream 86470 7092802 ~ 7096706 (-)
LOC113537541 c26hxorf38 coding downstream 92646 7084926 ~ 7090530 (-)
si:ch211-91p5.3 NA coding downstream 100322 7069178 ~ 7082854 (-)
LOC113537750 fgf14,LOC108258297,LOC108434733,LOC105911936 coding downstream 158170 6958020 ~ 7025006 (-)
LOC113537349 LOC108258693 coding upstream 1416 7184802 ~ 7201325 (-)
ednrba ednrb,LOC108258323,LOC108434743,LOC107658690,LOC107566659,LOC105911940,LOC106600156,LOC105022329 coding upstream 34979 7218365 ~ 7226649 (-)
mid1 mid1,LOC103030906,LOC106575281,LOC106574413 coding upstream 70365 7253751 ~ 7302564 (-)
lig4 lig4,LOC108412030,LOC107654268 coding upstream 822986 8006372 ~ 8010233 (-)
irs2a LOC108258957,LOC108434672 coding upstream 859099 8042485 ~ 8054545 (-)
G371787 NA non-coding downstream 30017 7151438 ~ 7153159 (-)
G371634 NA non-coding downstream 281833 6891766 ~ 6901343 (-)
G371625 NA non-coding downstream 301396 6879870 ~ 6881780 (-)
G371632 NA non-coding downstream 315216 6867744 ~ 6867960 (-)
G371595 NA non-coding downstream 368105 6808493 ~ 6815071 (-)
G371929 NA non-coding upstream 227595 7410981 ~ 7415018 (-)
G371964 NA non-coding upstream 284403 7467789 ~ 7468460 (-)
G371967 NA non-coding upstream 292517 7475903 ~ 7476105 (-)
G372034 NA non-coding upstream 400878 7584264 ~ 7584503 (-)
G372037 NA non-coding upstream 406428 7589814 ~ 7590030 (-)
LOC113537271 LOC108258282 other downstream 114645 7058835 ~ 7068531 (-)
pspc1 pspc1,LOC108258933,LOC108434730 other downstream 272630 6870566 ~ 6910546 (-)
LOC113537742 LOC108258591 other downstream 819973 6358639 ~ 6363203 (-)
tpp2 tpp2,si:ch73-244f7.4,LOC107665822 other downstream 1149783 6015726 ~ 6033393 (-)
LOC113537623 NA other downstream 1230863 5942039 ~ 5952313 (-)
LOC113537388 arhgap6 other upstream 173885 7357271 ~ 7478509 (-)
G372086 LOC108258915 other upstream 534877 7718263 ~ 7724795 (-)
fam155a LOC108258331 other upstream 728824 7912210 ~ 7993096 (-)
cars2 cars2 other upstream 886016 8069402 ~ 8084539 (-)
LOC113537489 NA other upstream 1078049 8261435 ~ 8267272 (-)

Expression


Co-expression Network