fam155a (LOC108258331)


Basic Information

Item Value
gene id fam155a
gene name LOC108258331
gene type misc
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047620.1
NCBI id CM018566.1
chromosome length 19313417
location 7912210 ~ 7993096 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU440974
AATGTTCGCACAGCACATTCAAAAGGACTCATCCCTCACGCCAGCATACGTCTGCCACGACCTCGGCGGCTCCGAGGCTGAATCAAGGCAGACTGAAGCTCTGCTTGCTAGTCCTGGTCCTCTTGCACACGGTAGCGACCATGACAGCTGTCCAGAACTCCACCTGCCTAGCCACCATCTTCCCACTGGAGGACAATGCCCCCAGAGAAGAGTGACTGGATGTGGGGGGCTATCTCTAGCCAATCAGCATGCTCCAAAAAGTGAAAGATGGCCAGCAAGGAACTGGGCCGAACCGAGTCGAACCAAGCACGCCAGGCACGCCGGCAGATCCCTAGCTGCGCTTTACATGTTCAGTGCTCTTTATGCCCCAGGTAGAAGGAATGACAGAATTCATGAGAAGGGCAAGAAGAGACAAAGGAAGAGGAAGACCAAGACTGTGTCCTTTTGAGACGTCAGCTCTCACACTGTTCTGaaaagtatatattttgttttttgttgtatcAGATGATGGTCAGACTTTTTCCCTTTTTAGCTTCTGCTGTCAAAATGGGTTTCTGTGTATGTCAACCACTTCAGATTAAAATGGAATGAGGGAAGAAAGCAAAGTTATATGTATCCATGTCTCAGTCAAACCACTCTGTCATACTctattattttcacatttgacaGCTAGCATGAATAGAAGTATACATGCTGTTGCTGTAGCTAGAACGATACGAACAGTAGGCTGGTTGTGGATCCAAATACTCTTACTACCTGTAACCTCCATTCTTCATTTACCAGATTCAGATACGTTAGGTTCTTGCTTTGCAATCAAGATGTAGACAGGTCCATGTCAACAGAGCCTTAAAAACAGACCCCCATAGCAATCATACGGTGTATCATACCATTCCCCATTTTTAGTGTTCAGCCTCTATATATCCTCAGATCTGCAGTGCTGTTTAGCAGACTACATTATAACCCTGTTGTTATCCTGACACCTACTGGGACAGCTGATATCTTTTTACTGTGCAgtgaaaatgtgaatgtgtggtgATACACCACCATAATTTTCTCAAATATGGAAGGAAACCAGCGTGGAAGCCAAGAATGAGGACCTGGTAGAACCCACATTTCAAGGAATTAAATCATCCACTTATACTTTGTGTGAATAAGCTAATGGTTCTTTAGTATTCCATCCAAAGAGGCTGTCTCAAAACAGTTGTTTTATTgactatactctatactcttcCAGTATAGGTAAATCTTAACCTCACCAGGCTGCAATAACATGACTGGAGTGCCTGGTCTAGCCTAAAAATGCATACAAATGGAACAGCAGCCACTCCATCGAAACATCAAGTTTTATTTAGAATGTGGTTGTTAAATGACCTCCAGTAGCTTTCTTTGGGTGGTGCACAGATGGCTCAGAATGATATCATGTTTTGACAATTTTATCAATGGTTGTTCTTATTTCCACACTCTTATGCCCTCAATATGGTAACTTACACTGCTAATGAGCTGCTGAAAAAGAATGAGTTGCATAGTGATCAGTTGTAATTGCGCTGtaatttttttgcctttgttttgttCTCAAAATGTCCTACACTGTTGTGTAAAGGGCTTAGCGGATAGCATGGAAGGGAAGGAGTTCTCAAGGGCTCATTCTATAAATCTCCTTCTGTGTGtaggactgtgtgtgtttggtgtctgaCTGTATGGGCCTCTGGCTGCTGATATACTGTTTTGCGACCTGTTTTACTTGGTGTTACATCATTAACCTATGTTAAAAGACGTACTTTTTGCTTAACATTTACTGTGTCTTTGTAATTGGCTGGAGAATATCATGGGCACATTTGTCTCGCATAGTTACGTCTAATAATAATGTTGCAACGTCCCTCAATCTGAAAGGCCCAAGTGCCTCCACTGTCCATTTGTCTAGTGCTATTTCTTCAACACAGCAGTATATAGAGGAACGGCAGCAGTTACAGTTGATTAACAGTGTTTCCCACACATAGGTGATGCTTGGGTGTGGCCCCGAGGTATACTGATGAGAGCCCAAGTACATTTTGggccataaaaaaaatcacactttatttataatacatttcgAGAAAACAACTCATCTTGTTTTCAATTTGGCTTTGACACGCACACAACTCGGGAGAGAAAAGAACCAGACAGAGCTGGTAAAGCACATTCATTTCATCTTTATTGATTTTGACGTCAGTTTGTGCAAGTTCATGGTATACACTTAGTCTGTCAGAATAGCTCCTAATATTTGCACAGTCTCATTTTCTGCACATTTTGGTTGCATCTGGTGGCACTTTGCCTGGTTCCCATTTATTGGGCATATAACATTTCTGGCTCCCTATTTAACCACTCAGAACAAACCACTTTAATGTATTGTCAAGTGACAGAATacaacaaatatacagtatacaggtaaTTCAATATAGGATACAGGTAattcacttgattttttttgttcctaaTGATATGTggcaacaccttgaacactcTTTCAGCCACCTCACTCTGTTTCTAATGATAGAACAATTAGCCTGGAGCTATGCTCACGCTCCTCTTTATCAGAAACTAACAACATCGATTAAAAAAGTTATTAACACCTTAGCAGTTTTGCTCTCTCGTTGGTTTTTACTCTTGCATGATTTCATGCTATAATACGGGTATATTTAGAATTTCACATAGAAATGTCATGGTTGAGAGacttgtatgtatatatttcagtttGCACCCACAGCTATGCCGACTCTGCTCTGTGTTGTCGTACGACATACATGAAACTCGACCCAAGTAATCTGTGGGAAACACTGATTACACTACAGATGTAATAAAGGCCAGGCTAGAGCTGTATCATAGTTTTGTGATGATGGCTTTAATAAGTGAACTTAAAGACATGCTTTAACCCATAGTCTTGTTGTATGTCCTATTTGCTGTTTAAAGCAGCTGGCCAAGGTCTTACAGTTCAGAGGTGACAATCATTCCTCATTCCATTAATCATACACTTTAAATTATCGTAAAAAATGATCCAGCCTTATAAGCAAACAACAGGATTTGTGGATATTGGGGATGCCCTATAAATATGATATCCTttcttataataaaaatattgtaaggAAGgatattcaagaaaaaaatcttaaaagcTTTTGGCTTTGGGGTTTGCAGTATCCGACACTGCCGAGTTGCACACATCACCTTCTTTAAACAAGCTGTTTTACTCTGCCATTACATTTTACCCAGACAGCTTATATTATGCCTTGTGGTATCAACAACTTAGAAGTACATACTACAGTGTCTAGTGGAAGGAAGTCAGAGCAACCAGACTTATGTTTGTAATACTGACGTTTCTACAAGAATGCAAACCCTTCACAGCAGTTGTTGCCATTAGGTCTGTCAGACATTTTGATTTCTGATTAAAGGGTGACACATAGAAAGTCTCTAGAACTAGCCTCCATGTTGGTCCTGTTTACCTTATAAAAACACAAGGCAGATCCTACACAATCTGTGTAATATTGCCAGAATCACTTCAGATACATATTTAGCCTTTTCATCCCCTGTATGAACCACTGATCTTCAAAAATCCTGTTGATCTATGCAGATGTGCCTCTGTCATTATATTGTAGATTTGTGCTAATGTAAATTTGTGCTAATTTGTCTCACTGTTGCCTGTCTTTCTTTGAGATTTTGGTGTGTTTTTCCTCTCccacaatcttttttttctactctgTTGCCCTTTCATGGGTCACATGTCAGTTGTTTTTGCGCTGCATTTTCTTAGTCACGTCTCAAAAAGTGCGAGCTGCTTAAGTGAATGTTTTCCTCTTCTGGGCTGGGCAAATTGTGGTTCCGT
>XM_026931620.2
CGGACGTCGAGGGGGAAGAGGCCACCTCGTGCAGACGCGGAAGCGCCGGATCGAGTCCCTGCGCTTCCAGCCAGAAACCCCGGAACCGGAGCCAGCGGCCCGAGCGCACCGCGGCGGCTCTGCGCCAAGCGCGAGAGCGGAGCGCGTGACGAACAACGAAGAACGAGGAGACCATGTTGCTGCGCACGCGACcgcctcttcttcttcttctacttcttgtTCTTTCTCGCCCTCTCGAGCGGGCCTTCGACGATGCACGCAGTAATAATAATCCCATCGTCCCCCAAATGGACTAACTGATTATCGCAGATCATCGCGGAGGGAAGCCGCCGTTCAGTGTCACGGAGGGGAAGTGAAGGTATCGAAAGGGGGAAAAACGGACGCGCGAGGCGGACCTCAACGTCAAATGACCATAGTGGCAGAAAAGAAGCCGCCACGGTGGAGTCGGCCGGTGCTGCGCTTGTCCGAAATATGACCAGCGGCGCTCGCAAGCCTCGGCAGAGAGATGACGGCTTAACGCACCGGCTTGCACCGCGCGAGAACGAGCAGCAGTCCGCAGACTCCGAGCGGGCGCAGCGATGGCGGCTCTCCTTGGCGTCGCTCGTCGTCTTTGCCGCGCTGCTCTCTGACCGGCCGCGCTTCTGCGCCGAGGCCAAGCTCACCAAGAGCCGAGACGAGGAGCCGGCCAGGATCGCTCTAGACGCCATTTCCGTTGGAAACACTAGTCAACCGGAGTGGAGACTGGAAACGTGCCGCGCGGGCGGCGCGTCTAGGAGCTGCTTCACGTTCGCCGACGCGGACCACCTGTGTGCGGGCCTCTCGGGGTCAGACGTGAACCCGGGTGACTTGCACCTCTCGTTTTGCAACGCCTACTCGCTAATGGATTTGCTGTACGGCTTGACGAACCCGGACAACTTGAACTGCAGCGTGGATGCGCTCGCGAGCGGCGACCCGTCCAGGTGTAGCCTGTGCGTGCAGGCGTACCAGCGCTATGACCTGCACGCTCAGGAGAAATACGAGGAGTTCGAGAGCATGACCGAGCGCTACGAGACGGACGCGTACTCGGTGCGAACGTGCATGGATGAGTGTAAGGTGGTGTACAAGCCCTGGCTCTGCGCTCAATATTTCCAGAGCAATCAGTCCAGCTGTAGCCGCAAGATCCCATGTGAGCAGTACTGTCTTGAGGTCCAGCAGAGGTGTCCCTTCATATTGCCTGACAATGATGACCTTATACATGGTGGCACTCCCAGTTTTATATGTACAGGGCTTTTGGAGAATGCAGACAACACCAAGCATGAGCCACAGTGCTGTGATGTGCGGTGGGAGCTAAAATTCAATGAATGTTCGCACAGCACATTCAAAAGGACTCATCCCTCACGCCAGCATACGTCTGCCACGACCTCGGCGGCTCCGAGGCTGAATCAAGGCAGACTGAAGCTCTGCTTGCTAGTCCTGGTCCTCTTGCACACGGTAGCGACCATGACAGCTGTCCAGAACTCCACCTGCCTAGCCACCATCTTCCCACTGGAGGACAATGCCCCCAGAGAAGAGTGACTGGATGTGGGGGGCTATCTCTAGCCAATCAGCATGCTCCAAAAAGTGAAAGATGGCCAGCAAGGAACTGGGCCGAACCGAGTCGAACCAAGCACGCCAGGCACGCCGGCAGATCCCTAGCTGCGCTTTACATGTTCAGTGCTCTTTATGCCCCAGGTAGAAGGAATGACAGAATTCATGAGAAGGGCAAGAAGAGACAAAGGAAGAGGAAGACCAAGACTGTGTCCTTTTGAGACGTCAGCTCTCACACTGTTCTGaaaagtatatattttgttttttgttgtatcAGATGATGGTCAGACTTTTTCCCTTTTTAGCTTCTGCTGTCAAAATGGGTTTCTGTGTATGTCAACCACTTCAGATTAAAATGGAATGAGGGAAGAAAGCAAAGTTATATGTATCCATGTCTCAGTCAAACCACTCTGTCATACTctattattttcacatttgacaGCTAGCATGAATAGAAGTATACATGCTGTTGCTGTAGCTAGAACGATACGAACAGTAGGCTGGTTGTGGATCCAAATACTCTTACTACCTGTAACCTCCATTCTTCATTTACCAGATTCAGATACGTTAGGTTCTTGCTTTGCAATCAAGATGTAGACAGGTCCATGTCAACAGAGCCTTAAAAACAGACCCCCATAGCAATCATACGGTGTATCATACCATTCCCCATTTTTAGTGTTCAGCCTCTATATATCCTCAGATCTGCAGTGCTGTTTAGCAGACTACATTATAACCCTGTTGTTATCCTGACACCTACTGGGACAGCTGATATCTTTTTACTGTGCAgtgaaaatgtgaatgtgtggtgATACACCACCATAATTTTCTCAAATATGGAAGGAAACCAGCGTGGAAGCCAAGAATGAGGACCTGGTAGAACCCACATTTCAAGGAATTAAATCATCCACTTATACTTTGTGTGAATAAGCTAATGGTTCTTTAGTATTCCATCCAAAGAGGCTGTCTCAAAACAGTTGTTTTATTgactatactctatactcttcCAGTATAGGTAAATCTTAACCTCACCAGGCTGCAATAACATGACTGGAGTGCCTGGTCTAGCCTAAAAATGCATACAAATGGAACAGCAGCCACTCCATCGAAACATCAAGTTTTATTTAGAATGTGGTTGTTAAATGACCTCCAGTAGCTTTCTTTGGGTGGTGCACAGATGGCTCAGAATGATATCATGTTTTGACAATTTTATCAATGGTTGTTCTTATTTCCACACTCTTATGCCCTCAATATGGTAACTTACACTGCTAATGAGCTGCTGAAAAAGAATGAGTTGCATAGTGATCAGTTGTAATTGCGCTGtaatttttttgcctttgttttgttCTCAAAATGTCCTACACTGTTGTGTAAAGGGCTTAGCGGATAGCATGGAAGGGAAGGAGTTCTCAAGGGCTCATTCTATAAATCTCCTTCTGTGTGtaggactgtgtgtgtttggtgtctgaCTGTATGGGCCTCTGGCTGCTGATATACTGTTTTGCGACCTGTTTTACTTGGTGTTACATCATTAACCTATGTTAAAAGACGTACTTTTTGCTTAACATTTACTGTGTCTTTGTAATTGGCTGGAGAATATCATGGGCACATTTGTCTCGCATAGTTACGTCTAATAATAATGTTGCAACGTCCCTCAATCTGAAAGGCCCAAGTGCCTCCACTGTCCATTTGTCTAGTGCTATTTCTTCAACACAGCAGTATATAGAGGAACGGCAGCAGTTACAGTTGATTAACAGTGTTTCCCACACATAGGTGATGCTTGGGTGTGGCCCCGAGGTATACTGATGAGAGCCCAAGTACATTTTGggccataaaaaaaatcacactttatttataatacatttcgAGAAAACAACTCATCTTGTTTTCAATTTGGCTTTGACACGCACACAACTCGGGAGAGAAAAGAACCAGACAGAGCTGGTAAAGCACATTCATTTCATCTTTATTGATTTTGACGTCAGTTTGTGCAAGTTCATGGTATACACTTAGTCTGTCAGAATAGCTCCTAATATTTGCACAGTCTCATTTTCTGCACATTTTGGTTGCATCTGGTGGCACTTTGCCTGGTTCCCATTTATTGGGCATATAACATTTCTGGCTCCCTATTTAACCACTCAGAACAAACCACTTTAATGTATTGTCAAGTGACAGAATacaacaaatatacagtatacaggtaaTTCAATATAGGATACAGGTAattcacttgattttttttgttcctaaTGATATGTggcaacaccttgaacactcTTTCAGCCACCTCACTCTGTTTCTAATGATAGAACAATTAGCCTGGAGCTATGCTCACGCTCCTCTTTATCAGAAACTAACAACATCGATTAAAAAAGTTATTAACACCTTAGCAGTTTTGCTCTCTCGTTGGTTTTTACTCTTGCATGATTTCATGCTATAATACGGGTATATTTAGAATTTCACATAGAAATGTCATGGTTGAGAGacttgtatgtatatatttcagtttGCACCCACAGCTATGCCGACTCTGCTCTGTGTTGTCGTACGACATACATGAAACTCGACCCAAGTAATCTGTGGGAAACACTGATTACACTACAGATGTAATAAAGGCCAGGCTAGAGCTGTATCATAGTTTTGTGATGATGGCTTTAATAAGTGAACTTAAAGACATGCTTTAACCCATAGTCTTGTTGTATGTCCTATTTGCTGTTTAAAGCAGCTGGCCAAGGTCTTACAGTTCAGAGGTGACAATCATTCCTCATTCCATTAATCATACACTTTAAATTATCGTAAAAAATGATCCAGCCTTATAAGCAAACAACAGGATTTGTGGATATTGGGGATGCCCTATAAATATGATATCCTttcttataataaaaatattgtaaggAAGgatattcaagaaaaaaatcttaaaagcTTTTGGCTTTGGGGTTTGCAGTATCCGACACTGCCGAGTTGCACACATCACCTTCTTTAAACAAGCTGTTTTACTCTGCCATTACATTTTACCCAGACAGCTTATATTATGCCTTGTGGTATCAACAACTTAGAAGTACATACTACAGTGTCTAGTGGAAGGAAGTCAGAGCAACCAGACTTATGTTTGTAATACTGACGTTTCTACAAGAATGCAAACCCTTCACAGCAGTTGTTGCCATTAGGTCTGTCAGACATTTTGATTTCTGATTAAAGGGTGACACATAGAAAGTCTCTAGAACTAGCCTCCATGTTGGTCCTGTTTACCTTATAAAAACACAAGGCAGATCCTACACAATCTGTGTAATATTGCCAGAATCACTTCAGATACATATTTAGCCTTTTCATCCCCTGTATGAACCACTGATCTTCAAAAATCCTGTTGATCTATGCAGATGTGCCTCTGTCATTATATTGTAGATTTGTGCTAATGTAAATTTGTGCTAATTTGTCTCACTGTTGCCTGTCTTTCTTTGAGATTTTGGTGTGTTTTTCCTCTCccacaatcttttttttctactctgTTGCCCTTTCATGGGTCACATGTCAGTTGTTTTTGCGCTGCATTTTCTTAGTCACGTCTCAAAAAGTGCGAGCTGCTTAAGTGAATGTTTTCCTCTTCTGGGCTGGGCAAATTGTGGTTCCGTGgaatttaaaacactgacatggAATCAGACAGACATATATagatattacaattattattacagtgtcaTATTGTCATACAATAGATGCTTTAGTTCACTGtttctcttttaattttttttacacaaagactttgattaaatatttataattcgGTCTCACAGGTCATGACCTTTTTTGAACGTAAGATGAAAAATACAGATATGTTTATGAGAGTTCTGTtctaaggaaaaataaatagagatATGTTAACTATTA

Function

NR:

description
transmembrane protein FAM155A-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU440974 False 3856 TUCP 0.40 1 7912466 7916321
XM_026931620.2 True 5451 mRNA 0.45 3 7912210 7993096

Neighbor

gene id symbol gene type direction distance location
mid1 mid1,LOC103030906,LOC106575281,LOC106574413 coding downstream 609646 7253751 ~ 7302564 (-)
ednrba ednrb,LOC108258323,LOC108434743,LOC107658690,LOC107566659,LOC105911940,LOC106600156,LOC105022329 coding downstream 685561 7218365 ~ 7226649 (-)
LOC113537349 LOC108258693 coding downstream 710885 7184802 ~ 7201325 (-)
sugt1 sugt1,LOC104941757 coding downstream 730728 7156580 ~ 7181482 (-)
pcdh8 LOC108258318 coding downstream 815504 7092802 ~ 7096706 (-)
lig4 lig4,LOC108412030,LOC107654268 coding upstream 13276 8006372 ~ 8010233 (-)
irs2a LOC108258957,LOC108434672 coding upstream 49389 8042485 ~ 8054545 (-)
LOC113537312 LOC108259043 coding upstream 69125 8062221 ~ 8066451 (-)
LOC113537306 ube2a,ube2al,LOC108259060,LOC103029486,LOC103021436,LOC107552373,LOC105934920,LOC107588833 coding upstream 94684 8087780 ~ 8090097 (-)
ankrd10a ankrd10 coding upstream 98270 8091366 ~ 8105352 (-)
G372168 NA non-coding downstream 2658 7909124 ~ 7909552 (-)
G372132 NA non-coding downstream 131005 7780062 ~ 7781205 (-)
G372085 NA non-coding downstream 181102 7730710 ~ 7731108 (-)
G372095 NA non-coding downstream 207822 7682685 ~ 7704388 (-)
G372108 NA non-coding downstream 271824 7640173 ~ 7640386 (-)
G372307 NA non-coding upstream 23009 8016105 ~ 8016388 (-)
G372471 NA non-coding upstream 209672 8202768 ~ 8204224 (-)
G372522 NA non-coding upstream 435508 8428604 ~ 8444065 (-)
G372742 NA non-coding upstream 781936 8775032 ~ 8788141 (-)
LOC113537261 NA non-coding upstream 970489 8963585 ~ 8965621 (-)
G372086 LOC108258915 other downstream 187415 7718263 ~ 7724795 (-)
LOC113537388 arhgap6 other downstream 433701 7357271 ~ 7478509 (-)
LOC113537271 LOC108258282 other downstream 843679 7058835 ~ 7068531 (-)
pspc1 pspc1,LOC108258933,LOC108434730 other downstream 1001664 6870566 ~ 6910546 (-)
LOC113537742 LOC108258591 other downstream 1549007 6358639 ~ 6363203 (-)
cars2 cars2 other upstream 76306 8069402 ~ 8084539 (-)
LOC113537489 NA other upstream 268339 8261435 ~ 8267272 (-)
timmdc1 timmdc1 other upstream 327772 8320868 ~ 8329026 (-)
LOC113537606 nhlh2,LOC108258389,LOC103035065,LOC108434665,LOC107739819,LOC105019883 other upstream 436466 8429562 ~ 8432438 (-)
tsga10 LOC108258346 other upstream 598311 8591407 ~ 8610841 (-)

Expression


Co-expression Network