G375121


Basic Information

Item Value
gene id G375121
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047620.1
NCBI id CM018566.1
chromosome length 19313417
location 12742320 ~ 12742520 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU444229
GAAAGTTCCACCAAAGCAGAGACATTATTCATGCTATAGTTTCTCTAGAGCATGTACGTGGGTAATTATGAAGCCTAAGCTGTAGTTAGATATTTATCATTAGATAACTGAACCTGGAGCCAAAGCCACCAGTTTAATATCCAAACCACTAGAACTGATCCATGTTTCCACCAGTTTAATAGCCAACCCAATAGAATTAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU444229 True 201 lncRNA 0.38 1 12742320 12742520

Neighbor

gene id symbol gene type direction distance location
LOC113537226 NA coding downstream 82827 12643939 ~ 12659493 (-)
slc2a15b LOC108258984,LOC108435958,LOC107708658,LOC107704318,LOC107602731,LOC107699075 coding downstream 119970 12609053 ~ 12622350 (-)
fgf8b fgf8,fgf8b,LOC108258517,LOC107699081,LOC107568785,LOC107602739,LOC107738466,LOC107704317 coding downstream 149872 12585726 ~ 12592448 (-)
poll poll coding downstream 163927 12571039 ~ 12578393 (-)
wbp1lb LOC108259041 coding downstream 172022 12563004 ~ 12570298 (-)
pnpla4 pnpla4 coding upstream 1741 12744261 ~ 12751839 (-)
cd99 NA coding upstream 578743 13321263 ~ 13348834 (-)
trnar-ucu_15 NA coding upstream 581562 13324082 ~ 13324173 (-)
trnar-ucu_16 NA coding upstream 582997 13325517 ~ 13325608 (-)
trnar-ucu_17 NA coding upstream 583473 13325993 ~ 13326084 (-)
G375119 NA non-coding downstream 668 12741425 ~ 12741652 (-)
G375097 NA non-coding downstream 45102 12696015 ~ 12697218 (-)
G375028 NA non-coding downstream 156723 12585160 ~ 12585597 (-)
G375027 NA non-coding downstream 157661 12584445 ~ 12584659 (-)
G375018 NA non-coding downstream 181495 12560601 ~ 12560825 (-)
G375141 NA non-coding upstream 90356 12832876 ~ 12833354 (-)
G375329 NA non-coding upstream 525362 13267882 ~ 13271621 (-)
LOC113537738 NA non-coding upstream 644312 13386832 ~ 13401425 (-)
G375420 NA non-coding upstream 674302 13416822 ~ 13417096 (-)
G375455 NA non-coding upstream 756123 13498643 ~ 13505565 (-)
LOC113537246 NA other downstream 111917 12625051 ~ 12630403 (-)
mzt1 mzt1,si:dkey-15d12.2,LOC107556706 other downstream 658271 12078891 ~ 12084049 (-)
lipt1 lipt1 other downstream 1869764 10871224 ~ 10872556 (-)
cab39l cab39l,LOC107676861,LOC107718429 other downstream 2306953 10422152 ~ 10435367 (-)
LOC117596103 LOC102201964,LOC102304430 other downstream 2823541 9878843 ~ 9918779 (-)
gyg2 gyg2 other upstream 565193 13307713 ~ 13320530 (-)
G375428 NA other upstream 696699 13439219 ~ 13439535 (-)
klf5a LOC108259069 other upstream 1229816 13972336 ~ 13980251 (-)
pibf1 pibf1 other upstream 1240225 13982745 ~ 14016151 (-)
G375826 NA other upstream 1284774 14027294 ~ 14030879 (-)

Expression


Co-expression Network