plk1 (plk1,LOC107722962,LOC107702528)


Basic Information

Item Value
gene id plk1
gene name plk1,LOC107722962,LOC107702528
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047620.1
NCBI id CM018566.1
chromosome length 19313417
location 582498 ~ 589396 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026929181.2
agaatttaaaaatgatgcaGTGGTCAGAGTGTCAGTGCCGAGCGTCAGGAAGAAGCACACTACCCAGTTTTACACTTTTGcacgtttattattattttatttcggCTTAGATAGCGGTGGCGTTGTGTTCGTGTAGGTCTACATGGTTCTGGGCTGtaggtgtgtatatatttgtttagaaAGCAGAGTTTCAGTTGGAGTTTTTATTCGAATCTGACGCTTTGTGGAGCTCCGCGCTGCTGTCCGACCCAACGCCGACTCCTGCGGGCTGAGAGACACAGACATGAGCGCTGGCATGGCGAAGGCGGTGAAGCCTTCATCACACGTCGACCCCAAGTCTGCTCCTCTGAAGGAGATCCCGGACATCCTGGTGGATCCGCGCAGCATGAAGCGCTACATGCGGGGCCGCTTCCTGGGCAAAGGCGGCTTCGCCAAGTGCTACGAGATCACCGACATGGACACCAAGGAGGTGTTCGCGGGGAAGGTCGTGCCCAAGTCCCTGCTCATGAAGCCGCACCAGAAGGAGAAGATGAGCACCGAGATCGCCATCCACAAGAGCCTGGACAACCCGCATGTCGTCGGCTTCCACGGCTTCTTCGAGGACGAGGACTTCGTGTTCGTCGTGCTGGAGATCTGCAGGAGAAGATCCCTGCTGGAGCTGCACAAGCGCAGGAAGGCCGTGACGGAGCCCGAGGCGAGATACTTCATCCGTCAGACCATCCAGGGCGTCCACTACCTCCACAACAACAGAGTCATCCACCGCGACCTCAAACTGGGCAACCTGTTCCTGAACGATGACATGGAGGTTAAGATTGGCGACTTCGGTTTGGCCACGAAGATCGAGTTTGACGGCGAGAGGAAGAAGACGCTGTGCGGAACGCCGAACTACATCGCCCCCGAGGTGCTGTGCAAGAAGGGTCACAGCTTCGAGGTGGACGTCTGGTCCCTGGGCTGCATTCTGTACACGCTGCTGGTCGGGAAGCCGCCGTTCGAGACGTCGTGCCTGAAGGAGACGTACGTCCGCATCAAGAAGAACGAGTACACCATTCCCAGGCACATTAACCCCGTGGCTACGGCGCTCATCCGGCGGATGCTGCACGCCGACCCCACGCTCCGCCCCTCCGTCGCCGACCTGCTCGCAGACGAGTTCTTCACCTCGGGTTACGTTCCTCTGAGACTCCCGACGTCCTGCCTGACCGTACCGCCGAGGTTCTCCATCGCCCCCTCCAGCCTGGAGGCCGGCCTGCATCGCAAACCTCTGTCTGCTTTTAataaagACACCGACAGTCCGATTGAGAAAATGGGGAAGGTGGAGCAGCCGCTGAAAGAGGAGCCTCCACAAAGGGACGGATCCGAACAGCCCGACTGCCACCTGATCGACATGCTGCAGCAGCTGACGAGCGTAAACACTGCCAGGCCGTCCGAGAGGGAGCTCATACGGCAAGAGGAAGCCGAGGATCCGGCCTGCATCCCCATCTTCTGGATCAGCAAATGGGTCGATTACTCTGATAAATATGGActagGGTATCAGCTGTGTGACAACAGCGTCGGCGTCTTGTTCAACGACTCCACCCGCCTGATCATGTACGAGGACGGAGACAGCCTGCAGTACATCGACCGCGGGGGGGCGGAGTCTTACCTCAGCGTGCGCTCCTACCCCGCCGCTCTCTCGAAAAAGATCACGCTGCTCAAGTACTTCAGGAACTACATGAGCGAGCACTTGTTGAAGGCGGGCGCTAACATAACGCCGCGCGACGGAGACGAGCTCGCACGCCTGCCCTACCTGCGCCACTGGTTCCGCACGAAGAGCGCCATCGTGCTCCACCTGAGCAACGGCACGGTGCAGATCAACTTCTTCCAGGACCACACGAAGCTGATCCTGTGCCCCCTCATGGGTGCCGTGACGTACATCAACGAGCGACGCGACTTCTGCACCTACAAGATGAGTCTGATCGAGGAGTACGGCTGCTGTAAGGAGCTCGCCTCGCGCCTGCGCTACGCCCGCAGCATGGTGGAGAAACTAGCGGCCTGCAAAAGCAcagccaccaccaccaccacgtCCTCCGCCCGCTAGCTCACCAACACACCGGACTGCACTCGCAGACGGCCGGACGCTCGGTCGCCAACTCCGACGTTCACGGACTGAACCCTCAGAACTGTACACTttcatctgtctgtccgtcttttctctctctctctctccctttttttaACTCGTGAGGAGGGAAAGCGCAATGTGACCACGCTCCTCGTCTGCTGTATCATGTAAagtcttttctttgttttgtttttgttttttttctgtttaaatgtttttctgttttttctaaAAATCCCTGTTTTCCCTTTTcgtctgtctgtttttataaaGCTTTTATGGCTTTACTTGAAATAGCCACAAGTTAAATGGAATTGTATTAAACTGAGTGTATTCAATTTAATAAAGCTCctttttttggtgaaa

Function

symbol description
plk1 Predicted to enable protein serine/threonine kinase activity. Acts upstream of or within mitotic cell cycle and retina development in camera-type eye. Predicted to be located in midbody. Predicted to be active in cytoplasm; microtubule cytoskeleton; and nucleus. Is expressed in several structures, including immature eye; nervous system; neural tube; pharynx; and tail bud. Human ortholog(s) of this gene implicated in urinary bladder cancer. Orthologous to human PLK1 (polo like kinase 1).

NR:

description
PREDICTED: serine/threonine-protein kinase PLK1

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0000278 mitotic cell cycle biological_process
GO:0005524 ATP binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG:

id description
K06631 PLK1; polo-like kinase 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026929181.2 True 2464 mRNA 0.55 12 582498 589396

Neighbor

gene id symbol gene type direction distance location
chtf18 chtf18,LOC107725360 coding downstream 24286 544258 ~ 558212 (-)
uncx4.1 LOC108258667 coding downstream 57433 518604 ~ 525065 (-)
elfn1b elfn1b,LOC108258545,LOC108439159,LOC107722936,LOC107590768,LOC107702506,LOC107714143 coding downstream 174209 352453 ~ 408289 (-)
rgs11 rgs11 coding downstream 304815 262153 ~ 277683 (-)
percc1 LOC108258685 coding downstream 338324 234899 ~ 244174 (-)
LOC113535779 cacng3,LOC108258515,LOC108439097 coding upstream 56080 645476 ~ 651428 (-)
tlr2 tlr2 coding upstream 113803 703199 ~ 711315 (-)
fscn1b LOC108258690 coding upstream 307828 897224 ~ 902489 (-)
smcr8b LOC108258855 coding upstream 374459 963855 ~ 969617 (-)
mief2 mief2,LOC108258856,LOC107722977,LOC107725398 coding upstream 381396 970792 ~ 979232 (-)
G368903 NA non-coding downstream 638 578593 ~ 581860 (-)
G368725 NA non-coding downstream 300595 281439 ~ 281903 (-)
G368713 NA non-coding downstream 337718 244177 ~ 244780 (-)
G368689 NA non-coding downstream 388584 185834 ~ 193914 (-)
G368685 NA non-coding downstream 397852 179182 ~ 184646 (-)
G368912 NA non-coding upstream 82244 671640 ~ 673030 (-)
G368944 NA non-coding upstream 111688 701084 ~ 701288 (-)
G369130 NA non-coding upstream 282193 871589 ~ 875203 (-)
LOC117596193 NA non-coding upstream 677310 1266706 ~ 1270425 (-)
G369243 LOC108258881,LOC108261507 non-coding upstream 687677 1277073 ~ 1277650 (-)
pmm2 pmm2,LOC107692644,LOC101469678,LOC102299325,LOC100707130,LOC102200931,LOC107082664 other downstream 292590 284863 ~ 289908 (-)
si:dkeyp-75b4.8 NA other downstream 355396 202654 ~ 227102 (-)
rasd3 LOC108258668 other upstream 1740 591136 ~ 592595 (-)
prkcba prkcb other upstream 64057 653453 ~ 702345 (-)
zgc:77849 zgc:77849,LOC108258689,LOC103038624,LOC108439082,LOC107722949,LOC107692663,LOC107590708 other upstream 280363 869759 ~ 948803 (-)
G369125 actb other upstream 322157 911553 ~ 915683 (-)
G369242 LOC108258881 other upstream 686625 1276021 ~ 1276813 (-)

Expression


Co-expression Network