blzf1 (blzf1)


Basic Information

Item Value
gene id blzf1
gene name blzf1
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047620.1
NCBI id CM018566.1
chromosome length 19313417
location 5976377 ~ 5983797 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026931773.2
CGTTTCGAGGGGGATAATGAGAAACAGATCATATGCAAGCGTTCAAATATATAAAGCGCTGTCTAataatgtgtgttaaaaaaCACTAATGTAGAAATACTACAGTGTGTCAGTGATAGTTTGTTTTGGAGTGCAGTCCAGTAGGTGGCGATAAACAACATTTCGTCCGGAAGAATGAGAAGAAGTCAGAAAATGGCGATTTCCGGGTCAGGACTGTGAGGTTTAAGGCAAATCATACAAATCAGACTTGCACTGTGTGGAATTCTTTACGATTCATTTCATCCTGCTGCTGCTTTAAGGATCTACTTCAACCATGTCTGCTGACATCATGAAAGACCCCTCTGTCGTGTTTGTCCGTGGCCCTGGTGATGGCATGGAGATGGCCAAACCTGCGCTGAGCCCGGAGATGTCTGTGGAGACTCTGCCTCTAAAGGTATCTCCGCCTAGACAGTGTCCCAGGACTGCGCCGGCGTCCCCTGGTGTCCTTCACCTGGGAAAAGTGAACAGGGAGTCCTGCGCTGAGGTGGAGGCCGTGCGCATTGTTGTACCACGTGCTGCCATCGTCCGGACCGTGCGAGCCGGTGCCCACGCTGACAGCAAGACGGATGAAAGAGGATCAGGGTTTCCCAACCATGGTGAGGATCGTCCTCCGTCCCCTTCCTCAGAGCCACAGGACTATAAGAGCGTTGTGGAGAAGCTGCAGAACTCTGAGCGCAGGCTGCTGCAGGACAAAGAGGGGCTTTCGAACCAGCTGCGTGTTCAGACCGAGGTAAACAGAGAGCTGAAGAAACTTCTTGTGGCCTCAGTAGGCGACGACTTGCAGTATCACTTTGAGCGACTGTCGCGAGAGAAGAACCAGCTCATTCTGGAGAACGAGGTTCTGGGCCGCAACCTGGCGCACACGGCCGAGCAGCTGGAGCGCATGAGCATTCAGTGTGATGTGTGGAGGAGCAAATTCCTCGCCAGCCGAGTGATGGCTGAGGAGCTGACTAACGCCCGAGCTGCTCTCCAGCGACAGACCAGAGAGGCTCAAACTGCCATCCAGGACCTGCTGCGTGAGAGAGAGGAGTTCTCCCGAGacatgatgcacacacacagGTCTCTGGAGCAGCTGCTAGTCTCGCTACAGTGGGGTAGACAGCAAACCTACTACCCCAGCGCACAGCCGCTCAGCACCGGAGAACTGGCCGCGGCCAATCACAAGCTGGCTGACGCCATCAATTCGCATCTGCTGGGAAACATAGGCAAGAGCAGCACTAGTGTGAAGAGCAGCTCAGCTTCTGAACTCTGCAACACACCGGCTGAGAAAATGGCTGAAAAGGTACTCAGGATTCTGGATCCCATATCCTGCCCAGACACCGGGGGTGACTCGACCACTACCGACTCCACCGCTTCTCCTTTCCTTCATAATAAGAAAAGCATCGGACGTTTTCACCCGTACACTCGCTATGAGAACATCACCTTTAACTGCTGCGATCGCTGCACTGGCGAGCTGCTCGTCCTCTAAGACAAGCtcatattaaaggaatactccaatgttttttttttttaacccatttacTTCATCTGTAGTGTTTGTGATTACTATAAACAAGAACTTTGACACTTTTGCTTGTACAGAATAGAGaccaaaaaaaacaggaaaacctGTTTACCTGAAATCTACTTCTAatagaagtctaagggcagatgtGGAATTCCGTCAATAAGGATTTAAAGCTGTATACTCGACTATAATACACGAACAGGACAATTTCTGAAAGGACAAATTATCCAGATTTAAAGCTACATGTACAAACGGCTTTGATTAAAGTAGTTATGAAAGTGTTTTACATGTCTATCAGGTGCCCCTAGACTTCCCTTCTAAGTGAGCTTTAAGTAAACggattttctgttcttttctcagtaaagCGTTTGTCtgagatttataaatatatgcatTACAGATGTGGTCAATAGAGATTAGATTAAAAAACCACTGGAGTTTCCCTTAAATTACACTTTGTTACACTTcctattttcttttcttgttatcttgtttttttttttcagtccagaTCTGTGATACTAATACacatgagtgcaaaagtttgcataccctcaGGACAGAAATGTAGTGTGCTAGGATTTTTACAGATGTTCCTCCATTAGCACAGAGTTTGTCATGTGTAGTCAGTTTCGCATCTCCCTTCTGAATgtgaataatgtaaatattctctaatGACATGTTTGCCCGTGCTTTGCTCTTAAAACCTTCCTCCGAGCAGCTCTGGGATCCTCAGTGTAGCCCCATCATGCTTTcttcctccatccctccatctttctTCCTTCCATCTGTTACATCTGCCAGATTGTTTGGCAGATCATTACCCATTTTCCTACTATATGTTATAATTCTGCtaccttttcctttttaaaacgttagggatgcaaacttttgtcCTTCACTGTATCAGAAGATACACATCCGCTATACTGTAATATAACTATACGCctgactttttacttttttataacAACTGATTATTTGTACTAAAGCCGGACATGACACTATATCACTATATCTATGTTGGATTTTCTGATCACATTTGTGAACTGATGATTTCATTGCATTAATTTGAACAAAATATGATTAACTTCTTTTGGCTCATGCGAGTGCAGCGTTGATtcccaacaaccacagaaataGCGGAGCATCTGATGTTAATCACAGTGCATGATAAAACTGCTGGCGTTGTTATCTTCACATAATAAATGTGGCAATAAA
>XM_034300228.1
CGTGGACCGATTGATTGTcttgttgatgtttttatttgaatatattcATCTAATCAAATGtatgtctaattttttttaaaaagagacctttttattttatgGTTTAAGGCAAATCATACAAATCAGACTTGCACTGTGTGGAATTCTTTACGATTCATTTCATCCTGCTGCTGCTTTAAGGATCTACTTCAACCATGTCTGCTGACATCATGAAAGACCCCTCTGTCGTGTTTGTCCGTGGCCCTGGTGATGGCATGGAGATGGCCAAACCTGCGCTGAGCCCGGAGATGTCTGTGGAGACTCTGCCTCTAAAGGTATCTCCGCCTAGACAGTGTCCCAGGACTGCGCCGGCGTCCCCTGGTGTCCTTCACCTGGGAAAAGTGAACAGGGAGTCCTGCGCTGAGGTGGAGGCCGTGCGCATTGTTGTACCACGTGCTGCCATCGTCCGGACCGTGCGAGCCGGTGCCCACGCTGACAGCAAGACGGATGAAAGAGGATCAGGGTTTCCCAACCATGGTGAGGATCGTCCTCCGTCCCCTTCCTCAGAGCCACAGGACTATAAGAGCGTTGTGGAGAAGCTGCAGAACTCTGAGCGCAGGCTGCTGCAGGACAAAGAGGGGCTTTCGAACCAGCTGCGTGTTCAGACCGAGGTAAACAGAGAGCTGAAGAAACTTCTTGTGGCCTCAGTAGGCGACGACTTGCAGTATCACTTTGAGCGACTGTCGCGAGAGAAGAACCAGCTCATTCTGGAGAACGAGGTTCTGGGCCGCAACCTGGCGCACACGGCCGAGCAGCTGGAGCGCATGAGCATTCAGTGTGATGTGTGGAGGAGCAAATTCCTCGCCAGCCGAGTGATGGCTGAGGAGCTGACTAACGCCCGAGCTGCTCTCCAGCGACAGACCAGAGAGGCTCAAACTGCCATCCAGGACCTGCTGCGTGAGAGAGAGGAGTTCTCCCGAGacatgatgcacacacacagGTCTCTGGAGCAGCTGCTAGTCTCGCTACAGTGGGGTAGACAGCAAACCTACTACCCCAGCGCACAGCCGCTCAGCACCGGAGAACTGGCCGCGGCCAATCACAAGCTGGCTGACGCCATCAATTCGCATCTGCTGGGAAACATAGGCAAGAGCAGCACTAGTGTGAAGAGCAGCTCAGCTTCTGAACTCTGCAACACACCGGCTGAGAAAATGGCTGAAAAGGTACTCAGGATTCTGGATCCCATATCCTGCCCAGACACCGGGGGTGACTCGACCACTACCGACTCCACCGCTTCTCCTTTCCTTCATAATAAGAAAAGCATCGGACGTTTTCACCCGTACACTCGCTATGAGAACATCACCTTTAACTGCTGCGATCGCTGCACTGGCGAGCTGCTCGTCCTCTAAGACAAGCtcatattaaaggaatactccaatgttttttttttttaacccatttacTTCATCTGTAGTGTTTGTGATTACTATAAACAAGAACTTTGACACTTTTGCTTGTACAGAATAGAGaccaaaaaaaacaggaaaacctGTTTACCTGAAATCTACTTCTAatagaagtctaagggcagatgtGGAATTCCGTCAATAAGGATTTAAAGCTGTATACTCGACTATAATACACGAACAGGACAATTTCTGAAAGGACAAATTATCCAGATTTAAAGCTACATGTACAAACGGCTTTGATTAAAGTAGTTATGAAAGTGTTTTACATGTCTATCAGGTGCCCCTAGACTTCCCTTCTAAGTGAGCTTTAAGTAAACggattttctgttcttttctcagtaaagCGTTTGTCtgagatttataaatatatgcatTACAGATGTGGTCAATAGAGATTAGATTAAAAAACCACTGGAGTTTCCCTTAAATTACACTTTGTTACACTTcctattttcttttcttgttatcttgtttttttttttcagtccagaTCTGTGATACTAATACacatgagtgcaaaagtttgcataccctcaGGACAGAAATGTAGTGTGCTAGGATTTTTACAGATGTTCCTCCATTAGCACAGAGTTTGTCATGTGTAGTCAGTTTCGCATCTCCCTTCTGAATgtgaataatgtaaatattctctaatGACATGTTTGCCCGTGCTTTGCTCTTAAAACCTTCCTCCGAGCAGCTCTGGGATCCTCAGTGTAGCCCCATCATGCTTTcttcctccatccctccatctttctTCCTTCCATCTGTTACATCTGCCAGATTGTTTGGCAGATCATTACCCATTTTCCTACTATATGTTATAATTCTGCtaccttttcctttttaaaacgttagggatgcaaacttttgtcCTTCACTGTATCAGAAGATACACATCCGCTATACTGTAATATAACTATACGCctgactttttacttttttataacAACTGATTATTTGTACTAAAGCCGGACATGACACTATATCACTATATCTATGTTGGATTTTCTGATCACATTTGTGAACTGATGATTTCATTGCATTAATTTGAACAAAATATGATTAACTTCTTTTGGCTCATGCGAGTGCAGCGTTGATtcccaacaaccacagaaataGCGGAGCATCTGATGTTAATCACAGTGCATGATAAAACTGCTGGCGTTGTTATCTTCACATAATAAATGTGGCAATAAA

Function

symbol description
blzf1 Acts upstream of or within Golgi organization; cell-matrix adhesion; and muscle tissue morphogenesis. Predicted to be active in Golgi membrane. Is expressed in head; notochord; and somite. Orthologous to human BLZF1 (basic leucine zipper nuclear factor 1).

NR:

description
golgin-45-like

GO:

id name namespace
GO:0043001 Golgi to plasma membrane protein transport biological_process
GO:0007030 Golgi organization biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026931773.2 True 2767 mRNA 0.45 7 5976377 5983797
XM_034300228.1 False 2648 mRNA 0.45 7 5976377 5983574

Neighbor

gene id symbol gene type direction distance location
txnl4b txnl4b coding downstream 2938 5971040 ~ 5973439 (-)
mrpl16 mrpl16 coding downstream 7312 5963752 ~ 5969065 (-)
mrpl39 mrpl39 coding downstream 56178 5913959 ~ 5920199 (-)
jam2a jam2 coding downstream 67510 5896336 ~ 5908867 (-)
n6amt1 n6amt1,LOC107563652 coding downstream 380282 5589772 ~ 5596095 (-)
LOC113537602 tmem255b coding upstream 152710 6136507 ~ 6160962 (-)
cenpe cenpe,LOC107751066,LOC107573438 coding upstream 178317 6162114 ~ 6190394 (-)
grk1a grk1,grk1a,LOC107748333 coding upstream 207831 6191628 ~ 6200180 (-)
tfdp1b tfdp1 coding upstream 219900 6203697 ~ 6222555 (-)
tmco3 tmco3 coding upstream 242256 6226053 ~ 6238578 (-)
G371121 NA non-coding downstream 80689 5892326 ~ 5895688 (-)
LOC117596178 NA non-coding downstream 84580 5886846 ~ 5891797 (-)
G371117 NA non-coding downstream 90765 5880476 ~ 5885612 (-)
LOC117596170 NA non-coding downstream 457997 5510716 ~ 5518380 (-)
G370942 NA non-coding downstream 468008 5508102 ~ 5508369 (-)
G371147 ercc5 non-coding upstream 9692 5993489 ~ 5994747 (-)
G371152 NA non-coding upstream 14206 5998003 ~ 5998159 (-)
G371153 NA non-coding upstream 15051 5998848 ~ 5999474 (-)
G371135 NA non-coding upstream 17382 6001179 ~ 6001613 (-)
G371134 mettl21c,LOC108429839 non-coding upstream 18041 6001838 ~ 6004790 (-)
LOC113537623 NA other downstream 24064 5942039 ~ 5952313 (-)
LOC113537235 son,LOC107698912,LOC107709257,LOC107698212,LOC107571887,LOC107555269,LOC565999 other downstream 429345 5529992 ~ 5547032 (-)
LOC113537294 NA other downstream 581365 5388904 ~ 5395012 (-)
G370658 NA other downstream 1086996 4843329 ~ 4889381 (-)
LOC117596167 NA other downstream 3123166 2843212 ~ 2853211 (-)
tpp2 tpp2,si:ch73-244f7.4,LOC107665822 other upstream 31929 6015726 ~ 6033393 (-)
LOC113537742 LOC108258591 other upstream 374842 6358639 ~ 6363203 (-)
pspc1 pspc1,LOC108258933,LOC108434730 other upstream 886769 6870566 ~ 6910546 (-)
LOC113537271 LOC108258282 other upstream 1075038 7058835 ~ 7068531 (-)
LOC113537388 arhgap6 other upstream 1373474 7357271 ~ 7478509 (-)

Expression


Co-expression Network