gcgrb (LOC108258714,LOC108411214)


Basic Information

Item Value
gene id gcgrb
gene name LOC108258714,LOC108411214
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047620.1
NCBI id CM018566.1
chromosome length 19313417
location 16630624 ~ 16663097 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026931860.2
TCCTGGCGCGCTTCACTTTTCCGCGGCGCGCGCTGCATGCCCAAAAGCGCACGAGCCGAACTGAAAACAAACTCAATCCCAGTGAGAGAAAGTAACAAACTTCCAGCGTTTCACTTTATGACTTTATGATTATTGATTTGGAACTTTTTgggggattttattttttttgtatgttggaTTACGAACGCCGAGGTTTCTGTCTCTGGCGCGCGCACGGAGGAGGACGATGAGCGATCGCGCGCGGCGGGTAGAGGAGACGCAGTGGCTCCGAGgtacagggGTGCTATGTTGAGGGTGGCAGCGTGATGAATTGACTCACAGGCTGAGGGATGTACCTGCggctgctcctgctcctgttaacattctcctcacacacacagGTCTGTCTGGCTCTGAAGGTGTTGCGGGAGCAATGGGCCGTCTACAGGAATGAGTGCATTCAGAGTTTCAGTGGCAGCCCGTCTGCTACAGGTTTGGTGTGTAACAGGACTTTTGATCACTACACGTGTTGGCCTGATGGCTCGCCTGGCTCCATCGTTAACGTGTCCTGCCCGTGGTATCTGCCGTGGTATCACAAAGttaagcAGGGTAGAGTGTATCGAGTGTGTGGTGCCGACGGTCGATGGGCCGACAGTAAAAACACCACAGAGTGTGATGAGAATGATGATCGACTGgaAGAGTATTGGCAGATTATAAGTAAATTCAGGATCATGTATACAGTGGGTTACTCGCTCTCTCTGGCAGCTTTGGTCCTTGCGCTGGGAATCCTTGCAGCCTTCAGGAAGTTACACTGCATGAGGAACAACATCCACATGAATCTGTTCGGCTCGTTCATCCTGCGCGCCGTGTCCATCTTGGTGAAAGACGCACTGCTGGATCTGATCAACACCGCGCAAACAGAACGATACCACTACCAGGACCAGAGCTTGTTCAACGtcaagATAACTGCGGGATGTCgggttgccatggtgatgatGCAGTACAGCGTGATAGCGAATAATTACTGGCTGCTGGTGGAGGGTTTGTACCTGCACAGTCTCCTGGCCATAACCGTCTTCTCAGAGAGAAACTACTTGTACGTGTACCTGACCATCGGctgggGTGCGCCGGTGATATTCGTGTTGCCGTGGGTGACACTGAAGTATCTGTATGAAAATGATCTATGCTGGGAGAAGAACGTAAACATGGGCTACTGGTGGATCATCCGCTCGCCTATCCTGTTTGCCTATCTGattaatttctttatatttattagaattATAAAGATCCTGATGTCCAAACTTAAGGCTCATCAGATGAGGTACACAGACTATAAGTTCAGATTGGCTAAATCCACACTTACACTCATTCCACTGTTGGGGATTCACGCCATCCTCTTCACCTTCGTCATTGACGAGTCTGTGGATAGAGAATCTCTGTTGCGGCTCATTCGCCTCTTCTATGACCTGTTCTTCAGCTCCTTCCAGGTCGGAGATCAGAGGGGTTTGCTGGTGGCCATTTTGTACTGCTTTGTCAACAAAGAGGTACAGAATGAAATGTTGAAGCGATGGAAGCGTTGGAAGCTCGGGAAAGACATCGAGGAGGAATATCgtaacacacacagccagacgGCTCACGGCAAGAGTGCTAGTGTCAACGTGGCTTTACCGCCGGAACGTTCCGACACCCCCGAGTCCGCAGCGTCGGTCCCGCCCTCAGAGGAGAGCCGCCGGCTTGTGATTAGCTGCCGGAACGGTGCAGCACTGGCGCAAGGGATCGGCAGAGCGGGGCTGCAAGAGGGAACCAGTAACTGCAGCTCTCTGACCGAGGACATGTGCTTAGAGGAGCGAATTCACAACACGGACCATCCAGCAGGGACACAGGAATGCGACGTCTGAGGAAACTTTGGCCTCTTGAGGTTTTTGATGATAAtgtgttccaaaaaaaaagggataaaAATTGCTTCTTATaatagaaaaatgaaatatgtggtagataaacactactacacacactaaaagacacatatacagca
>XM_026931861.2
TCCTGGCGCGCTTCACTTTTCCGCGGCGCGCGCTGCATGCCCAAAAGCGCACGAGCCGAACTGAAAACAAACTCAATCCCAGTGAGAGAAAGTAACAAACTTCCAGCGTTTCACTTTATGACTTTATGATTATTGATTTGGAACTTTTTgggggattttattttttttgtatgttggaTTACGAACGCCGAGGTTTCTGTCTCTGGCGCGCGCACGGAGGAGGACGATGAGCGATCGCGCGCGGCGGGTAGAGGAGACGCAGTGGCTCCGAGGTGCTATGTTGAGGGTGGCAGCGTGATGAATTGACTCACAGGCTGAGGGATGTACCTGCggctgctcctgctcctgttaacattctcctcacacacacagGTCTGTCTGGCTCTGAAGGTGTTGCGGGAGCAATGGGCCGTCTACAGGAATGAGTGCATTCAGAGTTTCAGTGGCAGCCCGTCTGCTACAGGTTTGGTGTGTAACAGGACTTTTGATCACTACACGTGTTGGCCTGATGGCTCGCCTGGCTCCATCGTTAACGTGTCCTGCCCGTGGTATCTGCCGTGGTATCACAAAGttaagcAGGGTAGAGTGTATCGAGTGTGTGGTGCCGACGGTCGATGGGCCGACAGTAAAAACACCACAGAGTGTGATGAGAATGATGATCGACTGgaAGAGTATTGGCAGATTATAAGTAAATTCAGGATCATGTATACAGTGGGTTACTCGCTCTCTCTGGCAGCTTTGGTCCTTGCGCTGGGAATCCTTGCAGCCTTCAGGAAGTTACACTGCATGAGGAACAACATCCACATGAATCTGTTCGGCTCGTTCATCCTGCGCGCCGTGTCCATCTTGGTGAAAGACGCACTGCTGGATCTGATCAACACCGCGCAAACAGAACGATACCACTACCAGGACCAGAGCTTGTTCAACGtcaagATAACTGCGGGATGTCgggttgccatggtgatgatGCAGTACAGCGTGATAGCGAATAATTACTGGCTGCTGGTGGAGGGTTTGTACCTGCACAGTCTCCTGGCCATAACCGTCTTCTCAGAGAGAAACTACTTGTACGTGTACCTGACCATCGGctgggGTGCGCCGGTGATATTCGTGTTGCCGTGGGTGACACTGAAGTATCTGTATGAAAATGATCTATGCTGGGAGAAGAACGTAAACATGGGCTACTGGTGGATCATCCGCTCGCCTATCCTGTTTGCCTATCTGattaatttctttatatttattagaattATAAAGATCCTGATGTCCAAACTTAAGGCTCATCAGATGAGGTACACAGACTATAAGTTCAGATTGGCTAAATCCACACTTACACTCATTCCACTGTTGGGGATTCACGCCATCCTCTTCACCTTCGTCATTGACGAGTCTGTGGATAGAGAATCTCTGTTGCGGCTCATTCGCCTCTTCTATGACCTGTTCTTCAGCTCCTTCCAGGTCGGAGATCAGAGGGGTTTGCTGGTGGCCATTTTGTACTGCTTTGTCAACAAAGAGGTACAGAATGAAATGTTGAAGCGATGGAAGCGTTGGAAGCTCGGGAAAGACATCGAGGAGGAATATCgtaacacacacagccagacgGCTCACGGCAAGAGTGCTAGTGTCAACGTGGCTTTACCGCCGGAACGTTCCGACACCCCCGAGTCCGCAGCGTCGGTCCCGCCCTCAGAGGAGAGCCGCCGGCTTGTGATTAGCTGCCGGAACGGTGCAGCACTGGCGCAAGGGATCGGCAGAGCGGGGCTGCAAGAGGGAACCAGTAACTGCAGCTCTCTGACCGAGGACATGTGCTTAGAGGAGCGAATTCACAACACGGACCATCCAGCAGGGACACAGGAATGCGACGTCTGAGGAAACTTTGGCCTCTTGAGGTTTTTGATGATAAtgtgttccaaaaaaaaagggataaaAATTGCTTCTTATaatagaaaaatgaaatatgtggtagataaacactactacacacactaaaagacacatatacagca
>XM_026931862.2
TCCTGGCGCGCTTCACTTTTCCGCGGCGCGCGCTGCATGCCCAAAAGCGCACGAGCCGAACTGAAAACAAACTCAATCCCAGTGAGAGAAAGTAACAAACTTCCAGCGTTTCACTTTATGACTTTATGATTATTGATTTGGAACTTTTTgggggattttattttttttgtatgttggaTTACGAACGCCGAGGTTTCTGTCTCTGGCGCGCGCACGGAGGAGGACGATGAGCGATCGCGCGCGGCGGGTAGAGGAGACGCAGTGGCTCCGAGgtacagggGTGCTATGTTGAGGGTGGCAGCGTGATGAATTGACTCACAGGCTGAGGGATGTACCTGCggctgctcctgctcctgttaacattctcctcacacacacagGTCTGTCTGGCTCTGAAGGTGTTGCGGGAGCAATGGGCCGTCTACAGGAATGAGTGCATTCAGAGTTTCAGTGGCAGCCCGTCTGCTACAGGTTTGGTGTGTAACAGGACTTTTGATCACTACACGTGTTGGCCTGATGGCTCGCCTGGCTCCATCGTTAACGTGTCCTGCCCGTGGTATCTGCCGTGGTATCACAAAGttaagcAGGGTAGAGTGTATCGAGTGTGTGGTGCCGACGGTCGATGGGCCGACAGTAAAAACACCACAGAGTGTGATGAGAATGATGATCGACTGgaAGAGTATTGGCAGATTATAAGTAAATTCAGGATCATGTATACAGTGGGTTACTCGCTCTCTCTGGCAGCTTTGGTCCTTGCGCTGGGAATCCTTGCAGCCTTCAGGAAGTTACACTGCATGAGGAACAACATCCACATGAATCTGTTCGGCTCGTTCATCCTGCGCGCCGTGTCCATCTTGGTGAAAGACGCACTGCTGGATCTGATCAACACCGCGCAAACAGAACGATACCACTACCAGGACCAGAGCTTGTTCAACGtcaagATAACTGCGGGATGTCgggttgccatggtgatgatGCAGTACAGCGTGATAGCGAATAATTACTGGCTGCTGGTGGAGGGTTTGTACCTGCACAGTCTCCTGGCCATAACCGTCTTCTCAGAGAGAAACTACTTGTACGTGTACCTGACCATCGGctgggGTGCGCCGGTGATATTCGTGTTGCCGTGGGTGACACTGAAGTATCTGTATGAAAATGATCTATGCTGGGAGAAGAACGTAAACATGGGCTACTGGTGGATCATCCGCTCGCCTATCCTGTTTGCCTATCTGattaatttctttatatttattagaattATAAAGATCCTGATGTCCAAACTTAAGGCTCATCAGATGAGGTACACAGACTATAAGTTCAGATTGGCTAAATCCACACTTACACTCATTCCACTGTTGGGGATTCACGCCATCCTCTTCACCTTCGTCATTGACGAGTCTGTGGATAGAGAATCTCTGTTGCGGCTCATTCGCCTCTTCTATGACCTGTTCTTCAGCTCCTTCCAGGGTTTGCTGGTGGCCATTTTGTACTGCTTTGTCAACAAAGAGGTACAGAATGAAATGTTGAAGCGATGGAAGCGTTGGAAGCTCGGGAAAGACATCGAGGAGGAATATCgtaacacacacagccagacgGCTCACGGCAAGAGTGCTAGTGTCAACGTGGCTTTACCGCCGGAACGTTCCGACACCCCCGAGTCCGCAGCGTCGGTCCCGCCCTCAGAGGAGAGCCGCCGGCTTGTGATTAGCTGCCGGAACGGTGCAGCACTGGCGCAAGGGATCGGCAGAGCGGGGCTGCAAGAGGGAACCAGTAACTGCAGCTCTCTGACCGAGGACATGTGCTTAGAGGAGCGAATTCACAACACGGACCATCCAGCAGGGACACAGGAATGCGACGTCTGAGGAAACTTTGGCCTCTTGAGGTTTTTGATGATAAtgtgttccaaaaaaaaagggataaaAATTGCTTCTTATaatagaaaaatgaaatatgtggtagataaacactactacacacactaaaagacacatatacagca

Function

NR:

description
PREDICTED: glucagon receptor isoform X1

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0016020 membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG:

id description
K04581 GLP1R; glucagon-like peptide 1 receptor

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026931860.2 True 2014 mRNA 0.50 14 16630624 16663097
XM_026931861.2 False 2006 mRNA 0.50 14 16630624 16663097
XM_026931862.2 False 1999 mRNA 0.50 14 16630624 16663097

Neighbor

gene id symbol gene type direction distance location
zgc:65894 tubb4a,LOC107711200,LOC103367161,LOC108411210,LOC103372938,LOC100712088,LOC108258713,LOC103468788 coding downstream 40994 16583379 ~ 16589630 (-)
LOC117595682 LOC108258708,LOC108258415 coding downstream 71464 16533834 ~ 16559160 (-)
LOC113537390 LOC108258708,LOC108258415 coding downstream 105218 16497785 ~ 16525406 (-)
asf1bb asf1b,asf1bb,LOC107747137,LOC103026007,LOC107703766 coding downstream 212617 16413949 ~ 16418007 (-)
prkacab prkaca,prkacab,LOC107694605,LOC107703755,LOC106526233 coding downstream 218893 16398919 ~ 16411731 (-)
LOC113537431 LOC108258715 coding upstream 37000 16700097 ~ 16701130 (-)
si:dkey-27j5.5 LOC108258720 coding upstream 76395 16739492 ~ 16742838 (-)
LOC113537398 NA coding upstream 125024 16788121 ~ 16793721 (-)
LOC113537435 LOC108258733 coding upstream 202131 16865228 ~ 16872437 (-)
LOC117596109 NA coding upstream 225667 16888764 ~ 16898002 (-)
G377359 NA non-coding downstream 23077 16606330 ~ 16607547 (-)
LOC113547464 NA non-coding downstream 30402 16598913 ~ 16600222 (-)
G377244 NA non-coding downstream 142493 16487790 ~ 16488131 (-)
G377191 NA non-coding downstream 239821 16389094 ~ 16390803 (-)
G377172 NA non-coding downstream 280165 16350249 ~ 16350459 (-)
G377422 LOC108258724 non-coding upstream 193682 16856779 ~ 16858709 (-)
G377441 NA non-coding upstream 332301 16995398 ~ 16995649 (-)
G377474 NA non-coding upstream 369806 17032903 ~ 17052265 (-)
LOC117596165 NA non-coding upstream 405439 17068536 ~ 17078161 (-)
G377847 LOC108261577,LOC108258774 non-coding upstream 578738 17241835 ~ 17253715 (-)
si:dkey-76b14.2 LOC108258416,LOC105891053 other downstream 47487 16566253 ~ 16583137 (-)
LOC113537389 NA other downstream 155193 16421261 ~ 16475431 (-)
si:ch211-286b5.5 LOC108258470,LOC108443951,LOC103031617,LOC105901802,LOC101074561,LOC103154361,LOC100701095,LOC105012046,LOC107391594,LOC105938735 other downstream 409009 16216750 ~ 16221615 (-)
zgc:158803 LOC108258445,LOC108411937,LOC102793736,LOC100697878,LOC101478282,LOC102307186 other downstream 466254 16152919 ~ 16164370 (-)
vps54 vps54,LOC107709616 other downstream 645665 15963876 ~ 15984959 (-)
G377416 LOC108258724 other upstream 181915 16845012 ~ 16851663 (-)
LOC113525650 LOC108258801 other upstream 513685 17176782 ~ 17194992 (-)
G377862 NA other upstream 603132 17266229 ~ 17268030 (-)
LOC113526761 NA other upstream 670199 17333296 ~ 17338806 (-)
ubl5 ubl5 other upstream 1044871 17707968 ~ 17712629 (-)

Expression


Co-expression Network