dis3 (dis3,LOC107699072)


Basic Information

Item Value
gene id dis3
gene name dis3,LOC107699072
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047620.1
NCBI id CM018566.1
chromosome length 19313417
location 12093322 ~ 12107492 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026931982.2
CCCCGGAAATGTTTGTGGTTGGCCCGGATGTCGGATAGACACACGTGGGGTTCCTGTGCCTTGtgttttcataaatgttttgtGCGTAAATTTGACAACTACCGCTAGCCATGTTAAAGTCCAAAACGTTTGTTAAAAAGACCCGCTCGGGTGGCGTGTTGAAAATAGTACGTGAACACTATCTGCGGGATGATATTTGGTGCGGATGTGAAGTTTGTAGCGAATGTAAAGACGAATCTCCGGTACTGCAGCGTGATGCCTGTATAGAGAGCAACCTGTGCACCTTTCCTCACTATCTCATCCCGGACACTAATGTAGTCCTGCATCAGATCGACATTCTGGAGGATCCCCTGATCAGGAATGTGATCATCCTGCAGACGGTTTTACAGGAGGTCCGACACAGAAGTGCTCCAGTGTACAAACGGATTAAAGATGCTATCCATGACAAGGagaaacatttttatacattcacTAATGAACATCACAGGGAGACATTTGTTGAAAGGGAGCAGGGTGAGAGCGCCAACGACCGCAATGACCGAGCCATTCGCGTGGCGGCTAAGTGGTACACAGAGCACCTGAGCAAATCACCGAGCGGTTCAGAGCTGAAAGTGGTGCTGCTCACAAACGACCGCGCAAACAAGGAGAAAGCCGAACAGAGCAGCGTGATCGCTTACAAATGTGAGGAGTACATCAGAAGCCTGATTGGCAATCCCGAGCTGGTGGACAGACTGGCACTGACCTCTGATGATCAAAATGAGATCAGTGGCAGTAAAGTACTTTTCCCAGAGCATCTGCCTCTGTCCAAGATTCAGACGGGTATCAAGAGCGGCGCCTTTCTGCAGGGGTCGTTCCGGGCAAACACCGACAACTACCTGGAGGCTACTGTCTTCATCCATGGAGAAGGAGACAAGACCACGGAGgttcTCCTCCAGGGCCTGCAAAACCTGAACCGGGCCGTGCACCAGGACGTTGTGGCTGTGGAGCTCTTCCCCAAAGATCGCTGGGTCGCTCCTTCTTCTGTGGTGCTGCAGGACGATCGGCAGAATGATGaagacacagaggaagaggaggcagAGAAGAAGCTGGAGAGCCCTGTACCGGATACCACTATGCTAAAGCCCACTGGCCGTGTGGTGGGGATTATCAAGAGGAACTGGCGGCCCTTCTGCGGGATGCTCAACCAGTCTCAAATCAAAGAGGCCACCAGGCATCTGTTCACTCCTGCAGACAGAAGAATCCCACGGATCCGCATCGAGACACGTCAGGCCTCCACTTTGATAGGCCAGAGGATCATCGTGGCCATTGACGGCTGGCCGAAGAATTCCAGATATCCCAATGGTCACTTTGTGAGGAACCTGGGAGGGGCAGGTGAtaaggagacagagacagaggttCTGCTTTTAGAGCACGACGTTCCGCACCAGGCTTTCTCACAGGCCGTGCTCAGCTTCTTACCCAAAATGCCCTGGAGTGTCACAGAAGAGGATCTGAAAGTGAGAGCGGATCTGaggcacctgtgtgtgtgcagtgtcgACCCTCCTGGATGCACAGACATTGATGATGCCTTACACTGTCGTGAACTGGACAACGGAAACCTGgagGTCGGTGTCCATATTGCAGACGTGAGCCACTTTATTCGCCCAGGAAACGCGTTAGATCAGGAGGCAGCCAACAGAGGCACCACAGTCTATCTGTGTGGAAAGAGGATTGATATGGTTCCTGAGCTTCTGAGCTCTAATCTCTGCTCTCTGCGCTCCAATGTGGAAAGGTTAGCATTTTCCTGTATTTGGGAAATGAACCACAATGCTGAAATCATAAATACCCGCTTCACCAAGAGTGTCATTAATTCCAAGGCCTCTCTGACATACGCTGAAGCTCAGATGCGAATTGATGACTCCAGCATGAACGACGACGTCACCAAGAGCCTCCGGGGTCTGAACAAGCTGGCCAAGATCTTAAAGGGCCGGCGAATTGAAAAAGGGGCCCTGACGCTGTCCTCTCCTGAAGTGCGGTTCCACATGGACAGTGAGACTCATGACCCTATAGACCTCCAGACTAAAGAGCTAAAAGACACTAACTCCATGGTGGAGGAGTTCATGTTGCTGGCGAACATCTCTGTGGCCCAGAAGATCTATGAGGAGTTCTCTGAGTGTGCTCTTCTCAGGAAACACCCTGCGCCTCCTCCATCCAACTACGACATCCTTATCAAGGCCGCCAAGTCAAAGAATCTAGTGATCCGGACGGATTCTGCCAAGGCTCTGGCTGATTCTCTGAACGAGGCCACTCTGGAGAATTTTCTCTACTTCAACACACTGCTGCGTATCCTAGCCACACGCTGCATGATGCAGGCCGTTTACTTCTGCTCGGGGATGgacagcgacttccaccattaCGGCCTGGCCTCACccatctacacacacttcacctcgCCCATCAGGAGGTACTCTGACATCATAGTGCACCGGCTGCTGGCTGTGGCCATCCACGCTGACAGCACCTACCCCGAGCTCATGGACAAACACAAGCAGTCAGCTCTGTGCAACAACCTCAACTACAGACACAAGATGGCGCAGTATGCCCAGAGAGCCTCAGTGGCCTTCCACACACAGCTCTTCTTCAAGAACAAAGGTATTCTGAACGAAGAAggcttcattttgtttgtaagGAAGAAcgccatcatcatcctcatcccaAAGTTCGGCCTGGAGGGCACGGTGTTCTTCGAGAACAAGGACAAACCGGGACCACGGCTCAGCTTCGACTCTGAGGGCCCCACTCTGACCGTGGCGGATCAGCACACTTTCCACATGTTCGACAAGGTGAAAGTGACCATCAGTCTGGATGCCTCCAACATCCAGCACCAGAAGATCAGGATGGCTCTGTTAGAGCCAGTGATCCCGGGTGTCAGTGTGCCGTTACCAGAACTAGAACCCGAGGCAAAGAAACCCAAACTGGATCGCTGAGACCTCTGACTGCCTTCACCATCTGTGTCTAGTTTCTTATTTTAATGCTCATTTTTAAATCTCTGTAAATATTCTTTTGCTCAGTCGGGTCTAGGAGTTATAATATAGAGACATGGAGCTCTGTATGAATTGTAGGTCAgtttcaggagtgtgtgattggattTCTGGGTGATACATTATTCTGTTTCACTGAACGTCACAAAACTGGCCTTTGGTTCAGGAACAAATGGATTATAAATTTACCGACATTAACAGCAGAACAactgttattaattaaaatgagttttttaaacaaa
>XM_034300378.1
AGTCCTGCATCAGGTATGAGTTTAAACTATCTCATCCCGGACACTAATGTAGTCCTGCATCAGATCGACATTCTGGAGGATCCCCTGATCAGGAATGTGATCATCCTGCAGACGGTTTTACAGGAGGTCCGACACAGAAGTGCTCCAGTGTACAAACGGATTAAAGATGCTATCCATGACAAGGagaaacatttttatacattcacTAATGAACATCACAGGGAGACATTTGTTGAAAGGGAGCAGGGTGAGAGCGCCAACGACCGCAATGACCGAGCCATTCGCGTGGCGGCTAAGTGGTACACAGAGCACCTGAGCAAATCACCGAGCGGTTCAGAGCTGAAAGTGGTGCTGCTCACAAACGACCGCGCAAACAAGGAGAAAGCCGAACAGAGCAGCGTGATCGCTTACAAATGTGAGGAGTACATCAGAAGCCTGATTGGCAATCCCGAGCTGGTGGACAGACTGGCACTGACCTCTGATGATCAAAATGAGATCAGTGGCAGTAAAGTACTTTTCCCAGAGCATCTGCCTCTGTCCAAGATTCAGACGGGTATCAAGAGCGGCGCCTTTCTGCAGGGGTCGTTCCGGGCAAACACCGACAACTACCTGGAGGCTACTGTCTTCATCCATGGAGAAGGAGACAAGACCACGGAGgttcTCCTCCAGGGCCTGCAAAACCTGAACCGGGCCGTGCACCAGGACGTTGTGGCTGTGGAGCTCTTCCCCAAAGATCGCTGGGTCGCTCCTTCTTCTGTGGTGCTGCAGGACGATCGGCAGAATGATGaagacacagaggaagaggaggcagAGAAGAAGCTGGAGAGCCCTGTACCGGATACCACTATGCTAAAGCCCACTGGCCGTGTGGTGGGGATTATCAAGAGGAACTGGCGGCCCTTCTGCGGGATGCTCAACCAGTCTCAAATCAAAGAGGCCACCAGGCATCTGTTCACTCCTGCAGACAGAAGAATCCCACGGATCCGCATCGAGACACGTCAGGCCTCCACTTTGATAGGCCAGAGGATCATCGTGGCCATTGACGGCTGGCCGAAGAATTCCAGATATCCCAATGGTCACTTTGTGAGGAACCTGGGAGGGGCAGGTGAtaaggagacagagacagaggttCTGCTTTTAGAGCACGACGTTCCGCACCAGGCTTTCTCACAGGCCGTGCTCAGCTTCTTACCCAAAATGCCCTGGAGTGTCACAGAAGAGGATCTGAAAGTGAGAGCGGATCTGaggcacctgtgtgtgtgcagtgtcgACCCTCCTGGATGCACAGACATTGATGATGCCTTACACTGTCGTGAACTGGACAACGGAAACCTGgagGTCGGTGTCCATATTGCAGACGTGAGCCACTTTATTCGCCCAGGAAACGCGTTAGATCAGGAGGCAGCCAACAGAGGCACCACAGTCTATCTGTGTGGAAAGAGGATTGATATGGTTCCTGAGCTTCTGAGCTCTAATCTCTGCTCTCTGCGCTCCAATGTGGAAAGGTTAGCATTTTCCTGTATTTGGGAAATGAACCACAATGCTGAAATCATAAATACCCGCTTCACCAAGAGTGTCATTAATTCCAAGGCCTCTCTGACATACGCTGAAGCTCAGATGCGAATTGATGACTCCAGCATGAACGACGACGTCACCAAGAGCCTCCGGGGTCTGAACAAGCTGGCCAAGATCTTAAAGGGCCGGCGAATTGAAAAAGGGGCCCTGACGCTGTCCTCTCCTGAAGTGCGGTTCCACATGGACAGTGAGACTCATGACCCTATAGACCTCCAGACTAAAGAGCTAAAAGACACTAACTCCATGGTGGAGGAGTTCATGTTGCTGGCGAACATCTCTGTGGCCCAGAAGATCTATGAGGAGTTCTCTGAGTGTGCTCTTCTCAGGAAACACCCTGCGCCTCCTCCATCCAACTACGACATCCTTATCAAGGCCGCCAAGTCAAAGAATCTAGTGATCCGGACGGATTCTGCCAAGGCTCTGGCTGATTCTCTGAACGAGGCCACTCTGGAGAATTTTCTCTACTTCAACACACTGCTGCGTATCCTAGCCACACGCTGCATGATGCAGGCCGTTTACTTCTGCTCGGGGATGgacagcgacttccaccattaCGGCCTGGCCTCACccatctacacacacttcacctcgCCCATCAGGAGGTACTCTGACATCATAGTGCACCGGCTGCTGGCTGTGGCCATCCACGCTGACAGCACCTACCCCGAGCTCATGGACAAACACAAGCAGTCAGCTCTGTGCAACAACCTCAACTACAGACACAAGATGGCGCAGTATGCCCAGAGAGCCTCAGTGGCCTTCCACACACAGCTCTTCTTCAAGAACAAAGGTATTCTGAACGAAGAAggcttcattttgtttgtaagGAAGAAcgccatcatcatcctcatcccaAAGTTCGGCCTGGAGGGCACGGTGTTCTTCGAGAACAAGGACAAACCGGGACCACGGCTCAGCTTCGACTCTGAGGGCCCCACTCTGACCGTGGCGGATCAGCACACTTTCCACATGTTCGACAAGGTGAAAGTGACCATCAGTCTGGATGCCTCCAACATCCAGCACCAGAAGATCAGGATGGCTCTGTTAGAGCCAGTGATCCCGGGTGTCAGTGTGCCGTTACCAGAACTAGAACCCGAGGCAAAGAAACCCAAACTGGATCGCTGAGACCTCTGACTGCCTTCACCATCTGTGTCTAGTTTCTTATTTTAATGCTCATTTTTAAATCTCTGTAAATATTCTTTTGCTCAGTCGGGTCTAGGAGTTATAATATAGAGACATGGAGCTCTGTATGAATTGTAGGTCAgtttcaggagtgtgtgattggattTCTGGGTGATACATTATTCTGTTTCACTGAACGTCACAAAACTGGCCTTTGGTTCAGGAACAAATGGATTATAAATTTACCGACATTAACAGCAGAACAactgttattaattaaaatgagttttttaaacaaa
>XM_034300379.1
AGTCCTGCATCAGGTATGAGTTTAAACTATCTCATCCCAGACACTAATGTAGTCCTGCATCAGATCGACATTCTGGAGGATCCCCTGATCAGGAATGTGATCATCCTGCAGACGGTTTTACAGGAGGTCCGACACAGAAGTGCTCCAGTGTACAAACGGATTAAAGATGCTATCCATGACAAGGagaaacatttttatacattcacTAATGAACATCACAGGGAGACATTTGTTGAAAGGGAGCAGGGTGAGAGCGCCAACGACCGCAATGACCGAGCCATTCGCGTGGCGGCTAAGTGGTACACAGAGCACCTGAGCAAATCACCGAGCGGTTCAGAGCTGAAAGTGGTGCTGCTCACAAACGACCGCGCAAACAAGGAGAAAGCCGAACAGAGCAGCGTGATCGCTTACAAATGTGAGGAGTACATCAGAAGCCTGATTGGCAATCCCGAGCTGGTGGACAGACTGGCACTGACCTCTGATGATCAAAATGAGATCAGTGGCAGTAAAGTACTTTTCCCAGAGCATCTGCCTCTGTCCAAGATTCAGACGGGTATCAAGAGCGGCGCCTTTCTGCAGGGGTCGTTCCGGGCAAACACCGACAACTACCTGGAGGCTACTGTCTTCATCCATGGAGAAGGAGACAAGACCACGGAGgttcTCCTCCAGGGCCTGCAAAACCTGAACCGGGCCGTGCACCAGGACGTTGTGGCTGTGGAGCTCTTCCCCAAAGATCGCTGGGTCGCTCCTTCTTCTGTGGTGCTGCAGGACGATCGGCAGAATGATGaagacacagaggaagaggaggcagAGAAGAAGCTGGAGAGCCCTGTACCGGATACCACTATGCTAAAGCCCACTGGCCGTGTGGTGGGGATTATCAAGAGGAACTGGCGGCCCTTCTGCGGGATGCTCAACCAGTCTCAAATCAAAGAGGCCACCAGGCATCTGTTCACTCCTGCAGACAGAAGAATCCCACGGATCCGCATCGAGACACGTCAGGCCTCCACTTTGATAGGCCAGAGGATCATCGTGGCCATTGACGGCTGGCCGAAGAATTCCAGATATCCCAATGGTCACTTTGTGAGGAACCTGGGAGGGGCAGGTGAtaaggagacagagacagaggttCTGCTTTTAGAGCACGACGTTCCGCACCAGGCTTTCTCACAGGCCGTGCTCAGCTTCTTACCCAAAATGCCCTGGAGTGTCACAGAAGAGGATCTGAAAGTGAGAGCGGATCTGaggcacctgtgtgtgtgcagtgtcgACCCTCCTGGATGCACAGACATTGATGATGCCTTACACTGTCGTGAACTGGACAACGGAAACCTGgagGTCGGTGTCCATATTGCAGACGTGAGCCACTTTATTCGCCCAGGAAACGCGTTAGATCAGGAGGCAGCCAACAGAGGCACCACAGTCTATCTGTGTGGAAAGAGGATTGATATGGTTCCTGAGCTTCTGAGCTCTAATCTCTGCTCTCTGCGCTCCAATGTGGAAAGGTTAGCATTTTCCTGTATTTGGGAAATGAACCACAATGCTGAAATCATAAATACCCGCTTCACCAAGAGTGTCATTAATTCCAAGGCCTCTCTGACATACGCTGAAGCTCAGATGCGAATTGATGACTCCAGCATGAACGACGACGTCACCAAGAGCCTCCGGGGTCTGAACAAGCTGGCCAAGATCTTAAAGGGCCGGCGAATTGAAAAAGGGGCCCTGACGCTGTCCTCTCCTGAAGTGCGGTTCCACATGGACAGTGAGACTCATGACCCTATAGACCTCCAGACTAAAGAGCTAAAAGACACTAACTCCATGGTGGAGGAGTTCATGTTGCTGGCGAACATCTCTGTGGCCCAGAAGATCTATGAGGAGTTCTCTGAGTGTGCTCTTCTCAGGAAACACCCTGCGCCTCCTCCATCCAACTACGACATCCTTATCAAGGCCGCCAAGTCAAAGAATCTAGTGATCCGGACGGATTCTGCCAAGGCTCTGGCTGATTCTCTGAACGAGGCCACTCTGGAGAATTTTCTCTACTTCAACACACTGCTGCGTATCCTAGCCACACGCTGCATGATGCAGGCCGTTTACTTCTGCTCGGGGATGgacagcgacttccaccattaCGGCCTGGCCTCACccatctacacacacttcacctcgCCCATCAGGAGGTACTCTGACATCATAGTGCACCGGCTGCTGGCTGTGGCCATCCACGCTGACAGCACCTACCCCGAGCTCATGGACAAACACAAGCAGTCAGCTCTGTGCAACAACCTCAACTACAGACACAAGATGGCGCAGTATGCCCAGAGAGCCTCAGTGGCCTTCCACACACAGCTCTTCTTCAAGAACAAAGGTATTCTGAACGAAGAAggcttcattttgtttgtaagGAAGAAcgccatcatcatcctcatcccaAAGTTCGGCCTGGAGGGCACGGTGTTCTTCGAGAACAAGGACAAACCGGGACCACGGCTCAGCTTCGACTCTGAGGGCCCCACTCTGACCGTGGCGGATCAGCACACTTTCCACATGTTCGACAAGGTGAAAGTGACCATCAGTCTGGATGCCTCCAACATCCAGCACCAGAAGATCAGGATGGCTCTGTTAGAGCCAGTGATCCCGGGTGTCAGTGTGCCGTTACCAGAACTAGAACCCGAGGCAAAGAAACCCAAACTGGATCGCTGAGACCTCTGACTGCCTTCACCATCTGTGTCTAGTTTCTTATTTTAATGCTCATTTTTAAATCTCTGTAAATATTCTTTTGCTCAGTCGGGTCTAGGAGTTATAATATAGAGACATGGAGCTCTGTATGAATTGTAGGTCAgtttcaggagtgtgtgattggattTCTGGGTGATACATTATTCTGTTTCACTGAACGTCACAAAACTGGCCTTTGGTTCAGGAACAAATGGATTATAAATTTACCGACATTAACAGCAGAACAactgttattaattaaaatgagttttttaaacaaa

Function

symbol description
dis3 Predicted to enable 3'-5'-exoribonuclease activity and endonuclease activity. Predicted to be involved in rRNA catabolic process. Predicted to be located in nucleus. Predicted to be part of cytoplasmic exosome (RNase complex) and nuclear exosome (RNase complex). Orthologous to human DIS3 (DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease).

NR:

description
PREDICTED: exosome complex exonuclease RRP44

GO: NA

KEGG:

id description
K12585 DIS3, RRP44; exosome complex exonuclease DIS3/RRP44

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026931982.2 True 3262 mRNA 0.50 21 12093322 12107492
XM_034300378.1 False 2996 mRNA 0.51 21 12093322 12106546
XM_034300379.1 False 2996 mRNA 0.51 21 12093322 12105794

Neighbor

gene id symbol gene type direction distance location
dachc LOC108259061,LOC108435962,LOC107732708,LOC107602747 coding downstream 31937 11997011 ~ 12061385 (-)
ubac2 ubac2 coding downstream 108427 11956736 ~ 11984895 (-)
LOC113537469 LOC108258698,LOC108435966 coding downstream 140109 11945834 ~ 11953213 (-)
LOC117596169 igf2bp2,igf2bp2a,LOC108435967,LOC107752879,LOC107668393,LOC107749880 coding downstream 150227 11941152 ~ 11943095 (-)
igf2bp2b igf2bp2,LOC108435967,LOC107699092,LOC107704342,LOC107596519 coding downstream 156195 11891674 ~ 11937127 (-)
dlx2b LOC108258656 coding upstream 25983 12133475 ~ 12164139 (-)
ppp1r9alb LOC108258654,LOC105911690 coding upstream 84729 12192221 ~ 12215715 (-)
kcnq5b LOC108258980 coding upstream 124228 12231720 ~ 12336307 (-)
rims1b LOC108259070,LOC108441990 coding upstream 235702 12343194 ~ 12399766 (-)
cenpk cenpk coding upstream 299538 12407030 ~ 12413031 (-)
G374727 NA non-coding downstream 586 12092512 ~ 12092736 (-)
G374680 NA non-coding downstream 128541 11963804 ~ 11964781 (-)
G374657 igf2bp2,igf2bp2a,LOC108435967,LOC107752879,LOC107668393 non-coding downstream 150247 11934534 ~ 11943075 (-)
G374495 c26h3orf70 non-coding downstream 338207 11752574 ~ 11755115 (-)
G374442 NA non-coding downstream 424066 11668993 ~ 11669256 (-)
G374885 NA non-coding upstream 51216 12158708 ~ 12158915 (-)
G374935 NA non-coding upstream 215472 12322964 ~ 12323575 (-)
G374961 LOC108258298,LOC108258985,LOC108258304 non-coding upstream 329280 12436772 ~ 12437220 (-)
G374962 NA non-coding upstream 329864 12437356 ~ 12437686 (-)
G374963 NA non-coding upstream 333829 12441321 ~ 12441539 (-)
mzt1 mzt1,si:dkey-15d12.2,LOC107556706 other downstream 9273 12078891 ~ 12084049 (-)
lipt1 lipt1 other downstream 1220766 10871224 ~ 10872556 (-)
cab39l cab39l,LOC107676861,LOC107718429 other downstream 1657955 10422152 ~ 10435367 (-)
LOC117596103 LOC102201964,LOC102304430 other downstream 2174543 9878843 ~ 9918779 (-)
tsga10 LOC108258346 other downstream 3482481 8591407 ~ 8610841 (-)
LOC113537246 NA other upstream 517559 12625051 ~ 12630403 (-)
gyg2 gyg2 other upstream 1200221 13307713 ~ 13320530 (-)
G375428 NA other upstream 1331727 13439219 ~ 13439535 (-)
klf5a LOC108259069 other upstream 1864844 13972336 ~ 13980251 (-)
pibf1 pibf1 other upstream 1875253 13982745 ~ 14016151 (-)

Expression


Co-expression Network