f7i (fa7)


Basic Information

Item Value
gene id f7i
gene name fa7
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047620.1
NCBI id CM018566.1
chromosome length 19313417
location 6372375 ~ 6378994 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026932065.2
TAGTACAGTCAGTCAGTGCACTTTATCTTTTGACCCGCGGATCGAGCGCGAGGCGTGTTGTTGAGCTCTGGATGTCTGTCAGTGTGGAGCCTCTGAGGGAAGCTTGGAAACATGAAGAACGAGACTCTTCTTGCgttatttcttttttggcaCGCTGTATCCGGGGCAGTGTTCCTGAGGAGAAGCGATGCTAACTCTGTGCTGAGGCGCTTCAGGCGCGCGAACACGGGCTTCCTGGAGGAGGTGAAGCCCGGAAACCTGGAGCGCGAGTGCATCGAGGAGATCTGCGACTATGAGGAAGCGCGCGAGGTTTTCGAGGACGACGATCTAACGaaacaaTTTTGGTTGTCATACCACGCTCGTGAACCCTGCTTGACCAATCCATGCAAAAACAATGGGACTTGCATATATTTGGGAGACTCCTACATCTGCCGGTGCCTTGAAGGCTTCGAGGGCAAATATTGTCAAGAAGTGTTTGAGGATACTCTGAAGTGTCTGTATCTGAATGGTGGCTGTGAGCAGTTCTGTGATGGTTCAGGCCGCAGGAGAAAGTGCAAATGTGCCCCTGGTTATGCCCTTGGAGAGGACAGGAAGTCCTGCATTGCTCAAGTTCAGTATCCATGTGGTAAGGCCCCACTTCAGATTACGCACACTGTTTTACCACGGGCTGTGGGTGGAAATCAGTGCCCGAAAGGCCACTGCCCTTGGCAGGTCCTCTTGAAATACGATGGAGAGAGTCTCTGTGGAGGAGTTTTAGTGGATGCTCACTGGATTCTTACAGCTGGTCACTGTGTCGATAAGAAAGATGCTAAATATCTGAAGGTTATAGCAGGGGACCATAATATTGATGTGGTGGAAGGCACAGAGCAAACGTTTTCTGTATCGCATGTAATTATCCATGAGAGCTATGATCCAGCAACAGCAGACAGTGACTTGGCTCTTTTGCGGCTCAGTGAGCCAGCTACACTTTCAAATTACACCATTCCTATCTGTCTGCCAACTTCGGAGTTTGCCGAAATGGAACTGGACGCTGTTCGCTTCCACATCATTAGCGGATGGGGCCAGCGCACTGAAGGAGGCAACATTCCTAGCTCACAGTCCTCTAAAAGCATATCCCCTGTACTCCGTATGCTTGCTGTCCCATTCTTGCCTAAACCAGAATGCTCTGTTAAAAGTGGGGTTAATGTCACCAATAATATGCTCTGCGCCGGTTACTTTCACGGCAACCAGGAGTCTTGTCGAGGAGATGATGGCAGTCCCCTGACTACCCAGTACAAGGACACACATTTCCTGACTGGGATAGTGTCATGGGGCAAAGGATGTGCCCATCCAGGCTTCTATGCCATATATACCAAGGTTGCAAACTTCCTGGATTGGATTCAGCGTGGCATGGCTACTCCAATCGACCAACCAGATGCCCTCAACACTTCACATGCTTCAATCATGGCAACACCTCCTGCTGAGCAGTTCATTCAGAACTGAGTTTAGCTTGTTTAAGATAAGAGTATATCTAATCACTTGCTGATATCATTTTCTGAACTAAAGATAATAAATTCATCATCAATTTTGCAGGA

Function

NR:

description
PREDICTED: coagulation factor VII isoform X2

GO:

id name namespace
GO:0030195 negative regulation of blood coagulation biological_process
GO:0006508 proteolysis biological_process
GO:0005576 extracellular region cellular_component
GO:0005509 calcium ion binding molecular_function
GO:0004252 serine-type endopeptidase activity molecular_function

KEGG:

id description
K01320 F7; coagulation factor VII

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026932065.2 True 1574 mRNA 0.49 8 6372375 6378994

Neighbor

gene id symbol gene type direction distance location
LOC117596162 LOC108258591 coding downstream 42100 6326777 ~ 6330275 (-)
cul4a cul4a,LOC102780633 coding downstream 54916 6295380 ~ 6317459 (-)
lamp1a NA coding downstream 79628 6279824 ~ 6292747 (-)
tmco3 tmco3 coding downstream 133797 6226053 ~ 6238578 (-)
tfdp1b tfdp1 coding downstream 149820 6203697 ~ 6222555 (-)
f7 LOC108258589,LOC108429788 coding upstream 1335 6380329 ~ 6384799 (-)
f7l LOC108258590 coding upstream 5905 6384899 ~ 6392466 (-)
LOC113537540 LOC108258592,LOC108429813,LOC107739159,LOC107739162,LOC107751098,LOC107694465,LOC107570071 coding upstream 24268 6403262 ~ 6404088 (-)
LOC113537523 pou2f1 coding upstream 53015 6432009 ~ 6449919 (-)
dusp27 dusp27,LOC102309085 coding upstream 72581 6451575 ~ 6461551 (-)
G371134 mettl21c,LOC108429839 non-coding downstream 367585 6001838 ~ 6004790 (-)
G371135 NA non-coding downstream 370762 6001179 ~ 6001613 (-)
G371153 NA non-coding downstream 372901 5998848 ~ 5999474 (-)
G371152 NA non-coding downstream 374216 5998003 ~ 5998159 (-)
G371147 ercc5 non-coding downstream 377628 5993489 ~ 5994747 (-)
G371454 NA non-coding upstream 150403 6529397 ~ 6536004 (-)
G371487 NA non-coding upstream 184855 6563849 ~ 6566945 (-)
G371595 NA non-coding upstream 429499 6808493 ~ 6815071 (-)
G371632 NA non-coding upstream 488750 6867744 ~ 6867960 (-)
G371625 NA non-coding upstream 500876 6879870 ~ 6881780 (-)
LOC113537742 LOC108258591 other downstream 9172 6358639 ~ 6363203 (-)
tpp2 tpp2,si:ch73-244f7.4,LOC107665822 other downstream 338982 6015726 ~ 6033393 (-)
LOC113537623 NA other downstream 420062 5942039 ~ 5952313 (-)
LOC113537235 son,LOC107698912,LOC107709257,LOC107698212,LOC107571887,LOC107555269,LOC565999 other downstream 825343 5529992 ~ 5547032 (-)
LOC113537294 NA other downstream 977363 5388904 ~ 5395012 (-)
pspc1 pspc1,LOC108258933,LOC108434730 other upstream 491572 6870566 ~ 6910546 (-)
LOC113537271 LOC108258282 other upstream 679841 7058835 ~ 7068531 (-)
LOC113537388 arhgap6 other upstream 978277 7357271 ~ 7478509 (-)
G372086 LOC108258915 other upstream 1339269 7718263 ~ 7724795 (-)
fam155a LOC108258331 other upstream 1533216 7912210 ~ 7993096 (-)

Expression


Co-expression Network