poglut1 (poglut1)


Basic Information

Item Value
gene id poglut1
gene name poglut1
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047620.1
NCBI id CM018566.1
chromosome length 19313417
location 8329650 ~ 8336868 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026932245.2
GATCACCGAGCGCGCGATAAAATTTCTCAGTCACAACTAATCTatacaaaaaaacatggagCTCCTCTGTTTGTACATAccgctttttcttttcctcctgaGTGAACTCGAGTTTAGCCTGGCTGATAAAGGAGCACGATGGCAGAAATATCTCACTCATATTTCTGAAGCCACCAAAAACTATCAGCCATGCAGCCAGGAGAACTGCAGCTGCCACATCAGCGTCCTGAAGCAGGACCTGAAGCCGTTCAGCAACGGAATCACGAAGGAGCTCATGATGGACACAGTGCGGCGTGGTGTGGGCACACATTACCAAATCATCAACCACAAACTATACAGAGAACCGGAGTGTATGTTTCCAGCAAGGTGCAGTGGAGTCGAGCATTTTATCCTAAAAGTGATTGACAGGTTGCCTAATATGGAGATGATAATCAACGTGCGTGACTATCCTCAGGTGCCATCGTGGGTTCAGCCTGTCCTCCCTGTTCTCTCCTTTAGCAAGACGCCAGATTATCGGGACATCATGTATCCTGCTTGGACGTTTTGGGAAGGAGGACCTGCAGTTTGGCCCATTTACCCCACTGGACTGGGTCGCTGGGACCTGATGAGAGAAGACCTGAAAAAATCAGCAGCTCGATGGCCGTGGAAAAAGAAAAGCCCCAAAGGTTTCTTCAGAGGCTCCAGGACCAGTCCAGAGAGAGACCCATTAATTCTGCTCTCCAGAGAGGATCCGAGTCTGGTGGATGCTGAGTACACTAAGAATCAGGCGTGGAAATCTGAAAAGGACACTCTGGGTAGACCCCCAGCCAAGGAAGTTCCCCTAGTTGACCACTGTGAATACAAGTACCTCTTTAATTTCCGAGGCGTAGCAGCCAGCTTTCGCTTCAAGCACCTGTTTCTTTGTGGCTCGCTGGTCTTCCATGTAGGAGAGGAGTGGCTGGAGTTTTTCTATCCTCAGCTCAAGCCCTGGGTTCATTACATCCCAGTGAAACAGGATCTCTCTGACCTCAGGGACCTGCTGCATTTCGTCAAGGAAAACGACAAAGTGGCAGAGGCCATTGCACTAAGGGGCCAGAAGTTTATCGAAGATCACCTCCGTATGGAGGACGTGTCCTGCTACTGGGAGACACTCCTCACTGACTACAGCAAGCTGCTCGATTACAAACCCAAACGCAAATCCAGCTACAACCAGATCACCCGCAAACCTGACAGGTCTGAACTTTGACCTGCAGACGCACATGATTGTCCAGTGTCCAGAAAACGAGTTAACTGTAGTTTCTCCTCAACTTTGGCACTTGTTTCAAAACAGATCAGGCATGTAGAATGGGGTAAATAATAACTAGAAATCTGGCTTAATTGTACAACATTAGTTGAGAAGTGAGGCTGTAGATTAGATAATCAGTTCAGTCGATTCAGGGTTGAACATTCAAACATCTCTCAGTGCTTTAGGTGGTGCTAGTATGTAGTAAAGGCAGCTCTAATTATTCTGTGCACCTGCATCTTTAACATGCTGTGTAGTGCTCTTTTCTCTACGATGTCTCATCCTGCACTGGCAATACAATTCATTTTATCAGTGGAGCTTAAAATAGTTTCCAGCACTAACACATGCTGAACTATCAAATGAAATTAGTACAGGATGGAAAAGACTTTTATGCATCATAAACAGCACATTcagaatgtgaaataatgtgaaataatcgATGGTATAGTTTAGAAAATTCTAGTTTTACTGCAGACATCTGAAAATGTCAGCAGCAGTGTGAGACCAAATTTCAACAAAGTTAATTTAGTTAAGTAGTCGAAACAAATTAGAGAAGAGTGTGTTTTCTTAAATCTTGTCGtaataatgattaatttttaaGTAGAGTGACTTCACAAATGGCATGTCAATCATTCTGACTTGTCCTGTAATATTcagtaattatttttcatacattttggACATGAAGTATATTCACATATAGTGTCTCATTACTTGCCTAGTGACCTAAAATAGCTGTCATAGAAATGCTCTTATTCAGAATATTATCACTTCAATCACATTCTTCTTTTTCCACCCCCAGTGAAGACAGATTTGGGAGGCAGTACATACTGCCCCCTTCTGGGTGATAACTAaaaaaggcagacacacacacacacacacacacacacacacatatgcatccAGTGTTAAATATATTTCCCTGCTCAAACACTCAGTTCATGAGCAGGTTTAGATGTGTTAGCACAGGAATATTATAAGCTGGTCTTAAAACCTTAATCATCCCATCTTAGCCAAAATCGCTCCTTGTTGTATGTATCAGTATAAACACCAACACATCGAGCTCACATGGGTAGTAAGGCTGCCATAAGTAATTAGTGACTCACTTAGGACctataagtaaataaagtatCTGCAATCAACATGAAAGTGCCACTGTTATCTGAATGTGAACATTATTTTGCCATTCATGACATCCTGAAAatcatatgtatgtttttttttttttcatttagatgGTATGATATAGAGCCACATTGGCACTACAGTGTTGAATATGTTCTAGTATTCTCCAAGTACATCAGCAATATGtgttcaagtcaagtgggtttacATTGTGCTCCATGTTGTTCATTATCCAACTGACTGTAAATGATGAAAAGAAACAGGATATGCAGTTACCTCGTAATGTGTGGGTTTTTTACAGTCTACTGTTTTACATTGTACGTTCATCCATTTGCTTTTGAGAccaaataaatgatatttttcaaga

Function

symbol description
poglut1 Predicted to enable UDP-glucosyltransferase activity and UDP-xylosyltransferase activity. Predicted to be involved in positive regulation of Notch signaling pathway and protein O-linked glycosylation. Predicted to be active in endomembrane system. Human ortholog(s) of this gene implicated in Dowling-Degos disease and autosomal recessive limb-girdle muscular dystrophy type 2Z. Orthologous to human POGLUT1 (protein O-glucosyltransferase 1).

NR:

description
protein O-glucosyltransferase 1

GO: NA

KEGG:

id description
K13667 POGLUT1, RUMI, KTELC1; EGF-domain serine glucosyl/xylosyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026932245.2 True 2753 mRNA 0.42 11 8329650 8336868

Neighbor

gene id symbol gene type direction distance location
gk gk,LOC108259045,LOC107700103,LOC107667651,LOC107742635 coding downstream 9807 8294879 ~ 8319843 (-)
zgc:64002 LOC108258972 coding downstream 38299 8289161 ~ 8291351 (-)
LOC113537479 tceanc coding downstream 107107 8218639 ~ 8222543 (-)
rab9a rab9a,LOC108434684,LOC105902834,LOC107654259,LOC107667663 coding downstream 111455 8212903 ~ 8218195 (-)
u2af1 u2af1,LOC102219527,LOC105917412,LOC103389252,LOC101158751 coding downstream 172090 8150140 ~ 8157560 (-)
LOC113537751 vangl1,LOC107588836,LOC107552384,LOC107739810 coding upstream 18779 8355647 ~ 8415941 (-)
LOC113537664 zc3h12c,LOC108259022 coding upstream 192614 8529482 ~ 8554308 (-)
LOC113537579 NA coding upstream 219143 8556011 ~ 8569035 (-)
cracdlb LOC108259003 coding upstream 235403 8572271 ~ 8590418 (-)
col17a1a col17a1 coding upstream 303644 8640512 ~ 8669319 (-)
G372471 NA non-coding downstream 125426 8202768 ~ 8204224 (-)
G372307 NA non-coding downstream 313262 8016105 ~ 8016388 (-)
G372300 NA non-coding downstream 340452 7988950 ~ 7989198 (-)
G372288 NA non-coding downstream 352659 7976777 ~ 7976991 (-)
G372168 NA non-coding downstream 420098 7909124 ~ 7909552 (-)
G372522 NA non-coding upstream 91736 8428604 ~ 8444065 (-)
G372742 NA non-coding upstream 438164 8775032 ~ 8788141 (-)
LOC113537261 NA non-coding upstream 626717 8963585 ~ 8965621 (-)
G373288 NA non-coding upstream 1422873 9759741 ~ 9759949 (-)
G373292 neurl1,LOC107676877,LOC107746052 non-coding upstream 1426751 9763619 ~ 9764526 (-)
timmdc1 timmdc1 other downstream 624 8320868 ~ 8329026 (-)
LOC113537489 NA other downstream 62378 8261435 ~ 8267272 (-)
cars2 cars2 other downstream 245111 8069402 ~ 8084539 (-)
fam155a LOC108258331 other downstream 336554 7912210 ~ 7993096 (-)
G372086 LOC108258915 other downstream 604855 7718263 ~ 7724795 (-)
LOC113537606 nhlh2,LOC108258389,LOC103035065,LOC108434665,LOC107739819,LOC105019883 other upstream 92694 8429562 ~ 8432438 (-)
tsga10 LOC108258346 other upstream 254539 8591407 ~ 8610841 (-)
LOC117596103 LOC102201964,LOC102304430 other upstream 1541975 9878843 ~ 9918779 (-)
cab39l cab39l,LOC107676861,LOC107718429 other upstream 2085284 10422152 ~ 10435367 (-)
lipt1 lipt1 other upstream 2534356 10871224 ~ 10872556 (-)

Expression


Co-expression Network