morc3b (LOC108258289)


Basic Information

Item Value
gene id morc3b
gene name LOC108258289
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047620.1
NCBI id CM018566.1
chromosome length 19313417
location 10104532 ~ 10116972 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026932341.2
GCGCACTTCCGCGCGTAGTGTCGTGAACGCGCTCTCTGGAGGcgttaaaaacaaacatctaGCGTTAGTTTGTTATATTTCCGGAGAACATGGCTACTCGTAAACACAGAGGGATACCTCTGAGCTCGCTCAATCCTAAATTTCTTCATACAAACTCAACCAGCCATACCTGGCCCTTTAGTGCTATTGCTGAGCTGATTGATAATGCTTATGACCCAGATGTTCGTGCCAAGCAATTCTGGATAGATTGGACACGCATCAAAAACCTGGACTGCCTCTCATTCATGGATAATGGAGCAGGAATGACCAGAGCCAAACTGCATAAGATGCTCAGCTTTGGTTACAGTGACAAGAAAGCCATGAGAGACCATGTTCCAGTCGGTGTCTACGGCAACGGCTTCAAATCAGGTTCCATGCGCCTGGGGAAGGATGCCATCGTCTTCACTAAGACCAGAGACTCAATGAGTGTAGGCCTGCTGTCACAGTCTTACCTGCAGGCCATAAAAGCTCAGCAGATCATGGTGCCTATTATCACTTTCAGGCGGGATGGACAAAACCTACCAGAGGATGCAGCCAGTCTAGATGCGATCCTGAGACACTCACTGTTTAATACAGTGAAGGAGCTGTTCACTGAGCTGCGTGCCATCAGCACAGCCGGATGCACCGGCACACGCATCATTATCTGGAATCTGCGCATGACTACAAATGGGGAGACAGAATTCAACTTTGATGCAGATAAATATGATATTCAGATCCGAGCAAATGCTAGTGAGAGAACACGTGAGTGTCGAGCCATGACACCCGAGAGTGACTATTCATTAAGAGCATACTGTAGCATTTTGTATCTGAAGCCACGTATGCAAATCAACATTCGAGGTCAAAGAGTGAAAACCCAGCTCATCTCCAAGAGTCTTGCTTACATTGCCAATGACAACTACAGACCTTCATTCCTAACCAAACGTATTCGGATCACATTTGGGTTCAACACCAAAAGCAAGGAGCATTATGGTATCATGATGTACCACAAAAACAGACTCATCAAGGCTTATGAGAGAGTGAGCTGCCAACGCAAGGTAGAGAGAAAAGGTGTTGGGGTCATCGGTGTGATTGAATGTAATTTCCTTCAACCGACTCACAACAAACAGGACTTTGATGATACAGATAAATACAGGAAAACCATGCATAACCTCAGCATCAAGCTAGAAGAGTACTGGAACGAGATCCGCTACAAGCAGAAAAAAGAGGACCCAAAATGCACAGTTCCCATAGAGGATACAATGAAAGTTCCGGATCAAGTCTGGGTGCAGTGCGACAGCTGTCTCAAGTGGAGAAGGCTTCCAGATGGTTTTGACTGCAGTCGGCTGCCTGAGAAATGGTTCTGCAACATGAACCATGACCCACAATTCAGGAGCTGTCTGGTAGAGGAGGAACTGGAGGATCAAGAAGAGGAACAGAAGTCATACCCAAAACCCTTCAAACGCCAGAAGAGGAACAGTAAGAGTCTACAGGATGATCATGGGCCAGAGgTATTAGAGATTCCAGCCCTGGAAGGTCCTGTTAATGCCAGACAACTGAAGAATTCTGCATCCTGTAAGCCATCTCCTGCTGATCAGTTCAGTAATAGTGCGACCGGCCCCCTACTGTCGTCCACTTCTAATGCTCAAAGATCACCACTGCCTCTGATTAATCTCACTGCTCTCTCTGAGTCATTGAAAAGGATTAAAAGGAAACTTTCTACTGCTGAAGAAATGCCTCCGGCAGTGCATCCTATGCCTTATGCCTCTTTTCCTCCTAATGCCCCGCCACAAGGTAGTATCAcgttcattcacacacattccagTCTCGCACCAAACAAAGAAGAGAGCAAATGGGAGGGGATGGAATATGAGAAAAATGCAGATGCAGACAAACAATTAGACAACAAGGAGGGCAGTAAGACATATCAGGAGCCTGTTCAGGAGGAGGATGAGTGGCATGCTGGAGAGGAATCACCCACTGCAGAAACCCAGTACTATATAGCAGAGTCACACTCCATGGAGGAAGTGGGAGAGGAACTGCATGATGATAACGAGGAGGTGTGGAgtctgcagcagcagcaggatgagttgatggagatgatgaagCAGACGGCAGAGGAGAGGGATGCGTGCAGGGAGGAGCTGGAGCTGCTGCGGGATCACTGTACTGCCGTGGAGGATGAGAGGAGTCAGCTCCTCAGCAAGCTGGAAAggatggaggaagagaaagcCAGCTTGTCCGCCTTGTGTGACCAACTAAAGTGCAAAGTGGAAAGGCTGAAAATAGAGAAGGAAGGTAGATTGAGAGAAGATGCCCAAAGTGGAGAAGAGAGGCAGAAGCTGAGAAAGCTGCGTCTCAACCTGGGCCGCCTGCTGGTCTCCTTCGTTCCCGATCTCGACCTGAAGCAGGTGGATTTCAGCAGTGACGTCATTGACGAGCTTCTCGACCAGGTCTTAAAGGAAGTCACTTAAGGTCAAGTCACCACTGTCTTACGTGTTGGGTTTGCTATTTCTTCATGGTCAGTTAACCATGATATGCCTGACGGCTCATGGTTTCACTGCTGGCTAGTCAGGGTGAGATCATCACtatataaaaagtattaatGATTGTGGCCCAGCCTAGGCTTAGCAGACAGCAACACTGGTAATAGGATATGTTTCTAAGTCAGTTTTATTGCCTGTTACTGCCACCTATATCTAAGTCACTTGGTAAATAATATGCAAGGCATAATCATTGAATGTAGTACAATATtactataaaaaatattttttataatgttaattggttacaaatgtataaatttttttgaatgatattgtaataaataatatcataGTAATATTACTAAGAATTCTTGTTACTGTTTTCATTATATATACTTTCAACTGAGCCAtctaatgaaaagaaataaaatcaaagtgtTTACAAGTAA
>XM_026932342.2
AGGcgttaaaaacaaacatctaGCGTTAGTTTGTTATATTTCCGGAGAACATGGCTACTCGTAAACACAGAGGGATACCTCTGAGCTCGATAATGCTTATGACCCAGATGTTCGTGCCAAGCAATTCTGGATAGATTGGACACGCATCAAAAACCTGGACTGCCTCTCATTCATGGATAATGGAGCAGGAATGACCAGAGCCAAACTGCATAAGATGCTCAGCTTTGGTTACAGTGACAAGAAAGCCATGAGAGACCATGTTCCAGTCGGTGTCTACGGCAACGGCTTCAAATCAGGTTCCATGCGCCTGGGGAAGGATGCCATCGTCTTCACTAAGACCAGAGACTCAATGAGTGTAGGCCTGCTGTCACAGTCTTACCTGCAGGCCATAAAAGCTCAGCAGATCATGGTGCCTATTATCACTTTCAGGCGGGATGGACAAAACCTACCAGAGGATGCAGCCAGTCTAGATGCGATCCTGAGACACTCACTGTTTAATACAGTGAAGGAGCTGTTCACTGAGCTGCGTGCCATCAGCACAGCCGGATGCACCGGCACACGCATCATTATCTGGAATCTGCGCATGACTACAAATGGGGAGACAGAATTCAACTTTGATGCAGATAAATATGATATTCAGATCCGAGCAAATGCTAGTGAGAGAACACGTGAGTGTCGAGCCATGACACCCGAGAGTGACTATTCATTAAGAGCATACTGTAGCATTTTGTATCTGAAGCCACGTATGCAAATCAACATTCGAGGTCAAAGAGTGAAAACCCAGCTCATCTCCAAGAGTCTTGCTTACATTGCCAATGACAACTACAGACCTTCATTCCTAACCAAACGTATTCGGATCACATTTGGGTTCAACACCAAAAGCAAGGAGCATTATGGTATCATGATGTACCACAAAAACAGACTCATCAAGGCTTATGAGAGAGTGAGCTGCCAACGCAAGGTAGAGAGAAAAGGTGTTGGGGTCATCGGTGTGATTGAATGTAATTTCCTTCAACCGACTCACAACAAACAGGACTTTGATGATACAGATAAATACAGGAAAACCATGCATAACCTCAGCATCAAGCTAGAAGAGTACTGGAACGAGATCCGCTACAAGCAGAAAAAAGAGGACCCAAAATGCACAGTTCCCATAGAGGATACAATGAAAGTTCCGGATCAAGTCTGGGTGCAGTGCGACAGCTGTCTCAAGTGGAGAAGGCTTCCAGATGGTTTTGACTGCAGTCGGCTGCCTGAGAAATGGTTCTGCAACATGAACCATGACCCACAATTCAGGAGCTGTCTGGTAGAGGAGGAACTGGAGGATCAAGAAGAGGAACAGAAGTCATACCCAAAACCCTTCAAACGCCAGAAGAGGAACAGTAAGAGTCTACAGGATGATCATGGGCCAGAGgTATTAGAGATTCCAGCCCTGGAAGGTCCTGTTAATGCCAGACAACTGAAGAATTCTGCATCCTGTAAGCCATCTCCTGCTGATCAGTTCAGTAATAGTGCGACCGGCCCCCTACTGTCGTCCACTTCTAATGCTCAAAGATCACCACTGCCTCTGATTAATCTCACTGCTCTCTCTGAGTCATTGAAAAGGATTAAAAGGAAACTTTCTACTGCTGAAGAAATGCCTCCGGCAGTGCATCCTATGCCTTATGCCTCTTTTCCTCCTAATGCCCCGCCACAAGGTAGTATCAcgttcattcacacacattccagTCTCGCACCAAACAAAGAAGAGAGCAAATGGGAGGGGATGGAATATGAGAAAAATGCAGATGCAGACAAACAATTAGACAACAAGGAGGGCAGTAAGACATATCAGGAGCCTGTTCAGGAGGAGGATGAGTGGCATGCTGGAGAGGAATCACCCACTGCAGAAACCCAGTACTATATAGCAGAGTCACACTCCATGGAGGAAGTGGGAGAGGAACTGCATGATGATAACGAGGAGGTGTGGAgtctgcagcagcagcaggatgagttgatggagatgatgaagCAGACGGCAGAGGAGAGGGATGCGTGCAGGGAGGAGCTGGAGCTGCTGCGGGATCACTGTACTGCCGTGGAGGATGAGAGGAGTCAGCTCCTCAGCAAGCTGGAAAggatggaggaagagaaagcCAGCTTGTCCGCCTTGTGTGACCAACTAAAGTGCAAAGTGGAAAGGCTGAAAATAGAGAAGGAAGGTAGATTGAGAGAAGATGCCCAAAGTGGAGAAGAGAGGCAGAAGCTGAGAAAGCTGCGTCTCAACCTGGGCCGCCTGCTGGTCTCCTTCGTTCCCGATCTCGACCTGAAGCAGGTGGATTTCAGCAGTGACGTCATTGACGAGCTTCTCGACCAGGTCTTAAAGGAAGTCACTTAAGGTCAAGTCACCACTGTCTTACGTGTTGGGTTTGCTATTTCTTCATGGTCAGTTAACCATGATATGCCTGACGGCTCATGGTTTCACTGCTGGCTAGTCAGGGTGAGATCATCACtatataaaaagtattaatGATTGTGGCCCAGCCTAGGCTTAGCAGACAGCAACACTGGTAATAGGATATGTTTCTAAGTCAGTTTTATTGCCTGTTACTGCCACCTATATCTAAGTCACTTGGTAAATAATATGCAAGGCATAATCATTGAATGTAGTACAATATtactataaaaaatattttttataatgttaattggttacaaatgtataaatttttttgaatgatattgtaataaataatatcataGTAATATTACTAAGAATTCTTGTTACTGTTTTCATTATATATACTTTCAACTGAGCCAtctaatgaaaagaaataaaatcaaagtgtTTACAAGTAA

Function

NR:

description
PREDICTED: MORC family CW-type zinc finger protein 3-like

GO: NA

KEGG:

id description
K24135 MORC; MORC family CW-type zinc finger protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026932341.2 True 2950 mRNA 0.45 17 10104532 10116972
XM_026932342.2 False 2838 mRNA 0.45 16 10104532 10116933

Neighbor

gene id symbol gene type direction distance location
bcl9 bcl9,LOC107676875,LOC107746285 coding downstream 61277 9993701 ~ 10043255 (-)
gja8b gja8,cx44.1,LOC108258942,LOC107566539 coding downstream 134373 9968451 ~ 9970159 (-)
fstl1a LOC108258944,LOC108428196,LOC103028151,LOC106575075,LOC105019681 coding downstream 143162 9939296 ~ 9961370 (-)
lrrc58a LOC108258943,LOC108428195,LOC107566531 coding downstream 167359 9931449 ~ 9937173 (-)
stn1 obfc1 coding downstream 176555 9919822 ~ 9927977 (-)
cbr1 cbr1,LOC108428204,LOC107746284 coding upstream 3570 10120542 ~ 10123973 (-)
cryzl1 cryzl1 coding upstream 16240 10133212 ~ 10141577 (-)
LOC113537761 LOC108258610 coding upstream 100636 10217608 ~ 10236158 (-)
LOC113537273 kcnrg coding upstream 238254 10355226 ~ 10359434 (-)
arl11 arl11 coding upstream 280929 10397901 ~ 10399251 (-)
G373649 NA non-coding downstream 19795 10084439 ~ 10084737 (-)
G373629 NA non-coding downstream 79647 10022537 ~ 10024885 (-)
G373398 NA non-coding downstream 139989 9962422 ~ 9964543 (-)
G373327 NA non-coding downstream 272207 9831607 ~ 9832325 (-)
G373317 NA non-coding downstream 278839 9825461 ~ 9825693 (-)
G373656 setd4 non-coding upstream 9853 10126825 ~ 10127889 (-)
G373657 setd4 non-coding upstream 11837 10128809 ~ 10129630 (-)
G373658 NA non-coding upstream 12860 10129832 ~ 10130057 (-)
G373678 NA non-coding upstream 75024 10191996 ~ 10246820 (-)
G373714 NA non-coding upstream 138031 10255003 ~ 10268661 (-)
LOC117596103 LOC102201964,LOC102304430 other downstream 185753 9878843 ~ 9918779 (-)
tsga10 LOC108258346 other downstream 1493691 8591407 ~ 8610841 (-)
LOC113537606 nhlh2,LOC108258389,LOC103035065,LOC108434665,LOC107739819,LOC105019883 other downstream 1672094 8429562 ~ 8432438 (-)
timmdc1 timmdc1 other downstream 1775506 8320868 ~ 8329026 (-)
LOC113537489 NA other downstream 1837260 8261435 ~ 8267272 (-)
cab39l cab39l,LOC107676861,LOC107718429 other upstream 305180 10422152 ~ 10435367 (-)
lipt1 lipt1 other upstream 754252 10871224 ~ 10872556 (-)
mzt1 mzt1,si:dkey-15d12.2,LOC107556706 other upstream 1961919 12078891 ~ 12084049 (-)
LOC113537246 NA other upstream 2508079 12625051 ~ 12630403 (-)
gyg2 gyg2 other upstream 3190741 13307713 ~ 13320530 (-)

Expression


Co-expression Network