mief2 (mief2,LOC108258856,LOC107722977,LOC107725398)


Basic Information

Item Value
gene id mief2
gene name mief2,LOC108258856,LOC107722977,LOC107725398
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047620.1
NCBI id CM018566.1
chromosome length 19313417
location 970792 ~ 979232 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_034299979.1
AAAATGTTTCATCCAATCAGCGCTGCGTGCTGAAAGCTCTTTGGCTAGTTGACGTTAATGGACGGAACGAGTAACTGATATGACCTCGAGCTATGAAGTCGTGTTTAACGTCTAATTTTGTATTTAGGTTAGAAATGAGTTGGAGGATTTTCTGAAAAGACAGAGCCATGTATTATTCAAGTAAAAGACGGGATGGAATCAGCGCCATCATCGACTTCCTGCTGTCCAACGCCCGATTGGTGCTTGGAGTGGGCGGAGTCGCCGTCCTGGGCATCGCTACGTTAGCTGTGAAAAAGCTGATAGAGCGCGCCGGCCGGCCTCCCGATGACGAAAATCCTGATAAAAAGATGACGGAGAGCTGGGAGGAGCTTAGCCTGGTCGGTTCCTCCCCCAAACTGCTTCAAAAGGGCATTGAGGGTGTGGTCATGAAACAGATTGCTGCAGCCACCAAGAAAGAGGACCTGTCTCAGTCCGCGCCTCAGAGCCAATTCCAGACTCAGAGGAATGGATCAGACCCGGCTCACGCGCGCAAACGGCTAGATCTCTGCGTGTTAACATTCTCAGAAAGACTGGAGCAGTATTACCGGACACGTGTGTGCCTGTCCCCGAGCGAAGTGTCCCGAGCTCAGCAGAGAGCGCTCGACATTGCTACAGAGATTCAGGGCTTCCTGCACGCCAAACACCCCGACATGCCCCTGGGAGAGATGACCTTAGCGGGGTCGCTGCTCGACGACCTGCAGGTGGTCAAGGCTGATCACGCCTGCCTGCTCGTACCACTACAGatggagCCCAGTCTGTGGACCCCGATCGCTGGAGAGGACACGTTTCTCGGCCATCCTCAGTACTGCATGTTACGTCGCCAAAACCTCGAGTATTTCCCGCGTGGGCGGAGCTACTGGGACAGGCACCTCCTAGGCGGCTACCTGTCGTCTCAGCTCGTTGCCGAGCAACTACGCAAATCGATCACGGAGTCCATGAACTGGCCATCGCTGAGCGGAACCCTGGAGTGCGAGGTGCGCCCGGTGCTCGGGTCTCCCGCGCTGAAGCTGGAGATCCGAGCTCCGAGCGAAAGTAGAAATTTCGACGAAGAGCAGCTGTTTATTAGCATTCTGCCGACGGTGCGCTTGGGGGACATGACGCTAACAGCGCAGCCAGAAATCACCGGATCGTTTGACTACGTGTGGTACCAGAGTCTCTACACCAGCGAAACGGCTCGACTGGCCAGTCTCGACCAATCAGACGAGGAGTCGGGTGTTAGGAGAAAGTGCCTCAAAACGCTGAAGGCTGTGTGTCGGAACTGCCCCGCCCTCCACAAGCTGACCGGCGCACAGCTCAGCAACGTCATCCTGCACATGAGCGAGAAGGAGTTTGATTGGTCGGAGTCGGCGTTCGCTGATCGGTTCCAGCAGGCCATCGCGGAGCTGATTGGTTACCTGGAGACAGGTTTCCTTCCCAGTTACTTTAAACCCGCTGTGAATCTGCTGCAGGGCTTCACCGAGGACGACATCGATGAGATGGGCTTCATGCTCTACTGCGCCGTGAGCGAGCCCGAGATACTGCTCATATAACGAGTCGCGgttctaataaacacacacatacacatctatctatctatatatatatatatatatatatatatatatatatatatatacacacacacacacacacacacacacacacacacacacacacacacacacacacacacactctctttagGATGTACCTCTTTCTTATAGGTTAAACGTGcggtttgtaatttttatttattctttcagaGAAAAGCTAAAGTCAGCTTTACGCTCCAGTCGTAAAAGCTCGGTGGTGACGTGCTCACTTTATCGGCGGCTGATTTAAAGTCGCGTCAGCGTGAGAAATTACTGATTAAATTCTCAGAGTGTGAGCGACACCACGACACCGCGACGCTCATCTGAAATCGTCCAATAGGAGGCCGGCGTAGGATGACGCCAAACTTACAGGACAGCTACGATTACGATAGGAAACGTAAACGAAACGTGGGATTTAGAATTGTTGCAGAGGGAGAACGTCTCatcacaggcaaaaaaaaaagatagatgaAGTCCAACTTCTTGTATCGTTATTTCATAAAGAACGCTGTGAAGAACTGGCGTTCAtgttgtcatttattttttgcgTATAAAGTGCGGTTTCTTCTTCAGGCATGACATCACTGAGCGCTCTGATAGCGCTGACCGATCGCAGGTCTgacgttagaggatcttcatccgTCGTCGTTtgatctgacatggagaacgcGTGCGATCACACAGTCTGCAATAAAATTCAGCCATGAACGTATTAGAGAAGTTGTTTTCGTTGCACTTTATCTAATAAACAGCTGTAGagattacaaactgcacctttaaagcagaGCAGCAGTGCATTCTCGCTCAGACAGAACCTTATACATCAGACGTGTTCAGCGTGTTTCTGCCGCAGACTGATCCAGCACGAGCGCGTTCTGCCTCACACACCGAGTGTTTGACTGATACAGGGTCGAATAAAGCTGCGCGAATAAACTGAGCTCCAGTTAATTATGCAGGGAGTTTAGGCTTTAGTGCTTAATAATCTAATAACACTGATATTCCAGACGATGTGCTCTGGTTGGCACGCAGATCATAAAGATGGCACTTTAGTGAACGCCAAACCAGAACCGTGAGTTTTATCTTGTTTTCcacaaatgcaataaaacaaGTCTGCTGTAAACGACCTCAGACTGATGAGGCTCGTTCTGATCTGTGTTTCTCATGaggtttgaaaaatgtgtgtgttcgATAAAGTCTTCTCCCTGAACGAATAAAGCTCGTAATAAATCGGGCTGGAAAATCATTTAGAATCAAGTCTCTATTAAGTGaataaaaagttattttgaA
>XM_034299980.1
CTAAATCCACGCCAATCAAAATGTTTCATCCAATCAGCGCTGCGTGCTGAAAGCTCTTTGGCTAGTTGACGTTAATGGACGGAACGAGTAACTGATATGACCTCGAGCTATGAAGTCGTGTTTAACGTCTAATTTTGTATTTAGGTTAGAAATGAGTTGGAGGATTTTCTGAAAAGCCAGACAGTGAGAAGTCACAGGCCCTGATGCAGCACCAGGCTTTTCCCTGCTTCTGAGGATTAAAGACAGAGCCATGTATTATTCAAGTAAAAGACGGGATGGAATCAGCGCCATCATCGACTTCCTGCTGTCCAACGCCCGATTGGTGCTTGGAGTGGGCGGAGTCGCCGTCCTGGGCATCGCTACGTTAGCTGTGAAAAAGCTGATAGAGCGCGCCGGCCGGCCTCCCGATGACGAAAATCCTGATAAAAAGATGACGGAGAGCTGGGAGGAGCTTAGCCTGGTCGGTTCCTCCCCCAAACTGCTTCAAAAGGGCATTGAGGGTGTGGTCATGAAACAGATTGCTGCAGCCACCAAGAAAGAGGACCTGTCTCAGTCCGCGCCTCAGAGCCAATTCCAGACTCAGAGGAATGGATCAGACCCGGCTCACGCGCGCAAACGGCTAGATCTCTGCGTGTTAACATTCTCAGAAAGACTGGAGCAGTATTACCGGACACGTGTGTGCCTGTCCCCGAGCGAAGTGTCCCGAGCTCAGCAGAGAGCGCTCGACATTGCTACAGAGATTCAGGGCTTCCTGCACGCCAAACACCCCGACATGCCCCTGGGAGAGATGACCTTAGCGGGGTCGCTGCTCGACGACCTGCAGGTGGTCAAGGCTGATCACGCCTGCCTGCTCGTACCACTACAGatggagCCCAGTCTGTGGACCCCGATCGCTGGAGAGGACACGTTTCTCGGCCATCCTCAGTACTGCATGTTACGTCGCCAAAACCTCGAGTATTTCCCGCGTGGGCGGAGCTACTGGGACAGGCACCTCCTAGGCGGCTACCTGTCGTCTCAGCTCGTTGCCGAGCAACTACGCAAATCGATCACGGAGTCCATGAACTGGCCATCGCTGAGCGGAACCCTGGAGTGCGAGGTGCGCCCGGTGCTCGGGTCTCCCGCGCTGAAGCTGGAGATCCGAGCTCCGAGCGAAAGTAGAAATTTCGACGAAGAGCAGCTGTTTATTAGCATTCTGCCGACGGTGCGCTTGGGGGACATGACGCTAACAGCGCAGCCAGAAATCACCGGATCGTTTGACTACGTGTGGTACCAGAGTCTCTACACCAGCGAAACGGCTCGACTGGCCAGTCTCGACCAATCAGACGAGGAGTCGGGTGTTAGGAGAAAGTGCCTCAAAACGCTGAAGGCTGTGTGTCGGAACTGCCCCGCCCTCCACAAGCTGACCGGCGCACAGCTCAGCAACGTCATCCTGCACATGAGCGAGAAGGAGTTTGATTGGTCGGAGTCGGCGTTCGCTGATCGGTTCCAGCAGGCCATCGCGGAGCTGATTGGTTACCTGGAGACAGGTTTCCTTCCCAGTTACTTTAAACCCGCTGTGAATCTGCTGCAGGGCTTCACCGAGGACGACATCGATGAGATGGGCTTCATGCTCTACTGCGCCGTGAGCGAGCCCGAGATACTGCTCATATAACGAGTCGCGgttctaataaacacacacatacacatctatctatctatatatatatatatatatatatatatatatatatatatatacacacacacacacacacacacacacacacacacacacacacacacacacacacacacactctctttagGATGTACCTCTTTCTTATAGGTTAAACGTGcggtttgtaatttttatttattctttcagaGAAAAGCTAAAGTCAGCTTTACGCTCCAGTCGTAAAAGCTCGGTGGTGACGTGCTCACTTTATCGGCGGCTGATTTAAAGTCGCGTCAGCGTGAGAAATTACTGATTAAATTCTCAGAGTGTGAGCGACACCACGACACCGCGACGCTCATCTGAAATCGTCCAATAGGAGGCCGGCGTAGGATGACGCCAAACTTACAGGACAGCTACGATTACGATAGGAAACGTAAACGAAACGTGGGATTTAGAATTGTTGCAGAGGGAGAACGTCTCatcacaggcaaaaaaaaaagatagatgaAGTCCAACTTCTTGTATCGTTATTTCATAAAGAACGCTGTGAAGAACTGGCGTTCAtgttgtcatttattttttgcgTATAAAGTGCGGTTTCTTCTTCAGGCATGACATCACTGAGCGCTCTGATAGCGCTGACCGATCGCAGGTCTgacgttagaggatcttcatccgTCGTCGTTtgatctgacatggagaacgcGTGCGATCACACAGTCTGCAATAAAATTCAGCCATGAACGTATTAGAGAAGTTGTTTTCGTTGCACTTTATCTAATAAACAGCTGTAGagattacaaactgcacctttaaagcagaGCAGCAGTGCATTCTCGCTCAGACAGAACCTTATACATCAGACGTGTTCAGCGTGTTTCTGCCGCAGACTGATCCAGCACGAGCGCGTTCTGCCTCACACACCGAGTGTTTGACTGATACAGGGTCGAATAAAGCTGCGCGAATAAACTGAGCTCCAGTTAATTATGCAGGGAGTTTAGGCTTTAGTGCTTAATAATCTAATAACACTGATATTCCAGACGATGTGCTCTGGTTGGCACGCAGATCATAAAGATGGCACTTTAGTGAACGCCAAACCAGAACCGTGAGTTTTATCTTGTTTTCcacaaatgcaataaaacaaGTCTGCTGTAAACGACCTCAGACTGATGAGGCTCGTTCTGATCTGTGTTTCTCATGaggtttgaaaaatgtgtgtgttcgATAAAGTCTTCTCCCTGAACGAATAAAGCTCGTAATAAATCGGGCTGGAAAATCATTTAGAATCAAGTCTCTATTAAGTGaataaaaagttattttgaA
>XM_034299981.1
ATCAGCGCCATCATCGACTTCCTGCTGTCCAACGCCCGATTGGTGCTTGGAGTGGGCGGAGTCGCCGTCCTGGGCATCGCTACGTTAGCTGTGAAAAGCTGATAGAGCGCGCCGGCCGGCCTCCCGATGACGAAAATCCTGATAAAAAGATGACGGAGAGCTGGGAGGAGCTTAGCCTGGTCGGTTCCTCCCCCAAACTGCTTCAAAAGGGCATTGAGGGTGTGGTCATGAAACAGATTGCTGCAGCCACCAAGAAAGAGGACCTGTCTCAGTCCGCGCCTCAGAGCCAATTCCAGACTCAGAGGAATGGATCAGACCCGGCTCACGCGCGCAAACGGCTAGATCTCTGCGTGTTAACATTCTCAGAAAGACTGGAGCAGTATTACCGGACACGTGTGTGCCTGTCCCCGAGCGAAGTGTCCCGAGCTCAGCAGAGAGCGCTCGACATTGCTACAGAGATTCAGGGCTTCCTGCACGCCAAACACCCCGACATGCCCCTGGGAGAGATGACCTTAGCGGGGTCGCTGCTCGACGACCTGCAGGTGGTCAAGGCTGATCACGCCTGCCTGCTCGTACCACTACAGatggagCCCAGTCTGTGGACCCCGATCGCTGGAGAGGACACGTTTCTCGGCCATCCTCAGTACTGCATGTTACGTCGCCAAAACCTCGAGTATTTCCCGCGTGGGCGGAGCTACTGGGACAGGCACCTCCTAGGCGGCTACCTGTCGTCTCAGCTCGTTGCCGAGCAACTACGCAAATCGATCACGGAGTCCATGAACTGGCCATCGCTGAGCGGAACCCTGGAGTGCGAGGTGCGCCCGGTGCTCGGGTCTCCCGCGCTGAAGCTGGAGATCCGAGCTCCGAGCGAAAGTAGAAATTTCGACGAAGAGCAGCTGTTTATTAGCATTCTGCCGACGGTGCGCTTGGGGGACATGACGCTAACAGCGCAGCCAGAAATCACCGGATCGTTTGACTACGTGTGGTACCAGAGTCTCTACACCAGCGAAACGGCTCGACTGGCCAGTCTCGACCAATCAGACGAGGAGTCGGGTGTTAGGAGAAAGTGCCTCAAAACGCTGAAGGCTGTGTGTCGGAACTGCCCCGCCCTCCACAAGCTGACCGGCGCACAGCTCAGCAACGTCATCCTGCACATGAGCGAGAAGGAGTTTGATTGGTCGGAGTCGGCGTTCGCTGATCGGTTCCAGCAGGCCATCGCGGAGCTGATTGGTTACCTGGAGACAGGTTTCCTTCCCAGTTACTTTAAACCCGCTGTGAATCTGCTGCAGGGCTTCACCGAGGACGACATCGATGAGATGGGCTTCATGCTCTACTGCGCCGTGAGCGAGCCCGAGATACTGCTCATATAACGAGTCGCGgttctaataaacacacacatacacatctatctatctatatatatatatatatatatatatatatatatatatatatacacacacacacacacacacacacacacacacacacacacacacacacacacacacacactctctttagGATGTACCTCTTTCTTATAGGTTAAACGTGcggtttgtaatttttatttattctttcagaGAAAAGCTAAAGTCAGCTTTACGCTCCAGTCGTAAAAGCTCGGTGGTGACGTGCTCACTTTATCGGCGGCTGATTTAAAGTCGCGTCAGCGTGAGAAATTACTGATTAAATTCTCAGAGTGTGAGCGACACCACGACACCGCGACGCTCATCTGAAATCGTCCAATAGGAGGCCGGCGTAGGATGACGCCAAACTTACAGGACAGCTACGATTACGATAGGAAACGTAAACGAAACGTGGGATTTAGAATTGTTGCAGAGGGAGAACGTCTCatcacaggcaaaaaaaaaagatagatgaAGTCCAACTTCTTGTATCGTTATTTCATAAAGAACGCTGTGAAGAACTGGCGTTCAtgttgtcatttattttttgcgTATAAAGTGCGGTTTCTTCTTCAGGCATGACATCACTGAGCGCTCTGATAGCGCTGACCGATCGCAGGTCTgacgttagaggatcttcatccgTCGTCGTTtgatctgacatggagaacgcGTGCGATCACACAGTCTGCAATAAAATTCAGCCATGAACGTATTAGAGAAGTTGTTTTCGTTGCACTTTATCTAATAAACAGCTGTAGagattacaaactgcacctttaaagcagaGCAGCAGTGCATTCTCGCTCAGACAGAACCTTATACATCAGACGTGTTCAGCGTGTTTCTGCCGCAGACTGATCCAGCACGAGCGCGTTCTGCCTCACACACCGAGTGTTTGACTGATACAGGGTCGAATAAAGCTGCGCGAATAAACTGAGCTCCAGTTAATTATGCAGGGAGTTTAGGCTTTAGTGCTTAATAATCTAATAACACTGATATTCCAGACGATGTGCTCTGGTTGGCACGCAGATCATAAAGATGGCACTTTAGTGAACGCCAAACCAGAACCGTGAGTTTTATCTTGTTTTCcacaaatgcaataaaacaaGTCTGCTGTAAACGACCTCAGACTGATGAGGCTCGTTCTGATCTGTGTTTCTCATGaggtttgaaaaatgtgtgtgttcgATAAAGTCTTCTCCCTGAACGAATAAAGCTCGTAATAAATCGGGCTGGAAAATCATTTAGAATCAAGTCTCTATTAAGTGaataaaaagttattttgaA

Function

symbol description
mief2 Predicted to be involved in positive regulation of mitochondrial fission. Predicted to be active in mitochondrial outer membrane. Human ortholog(s) of this gene implicated in combined oxidative phosphorylation deficiency 49. Orthologous to human MIEF2 (mitochondrial elongation factor 2).

NR:

description
mitochondrial dynamics protein MID51

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_034299979.1 False 2897 mRNA 0.49 5 970792 979215
XM_034299980.1 True 2980 mRNA 0.49 6 970792 979232
XM_034299981.1 False 2699 mRNA 0.50 4 970792 974624

Neighbor

gene id symbol gene type direction distance location
smcr8b LOC108258855 coding downstream 1175 963855 ~ 969617 (-)
fscn1b LOC108258690 coding downstream 68303 897224 ~ 902489 (-)
tlr2 tlr2 coding downstream 259477 703199 ~ 711315 (-)
LOC113535779 cacng3,LOC108258515,LOC108439097 coding downstream 319364 645476 ~ 651428 (-)
plk1 plk1,LOC107722962,LOC107702528 coding downstream 381396 582498 ~ 589396 (-)
alkbh5 alkbh5 coding upstream 1638 980870 ~ 986570 (-)
myo15ab LOC108258396,LOC107725350,LOC107692700,LOC108441473,LOC108439093 coding upstream 8523 987755 ~ 1026021 (-)
cacna1hb LOC108258317 coding upstream 73158 1052390 ~ 1113599 (-)
LOC113535776 LOC108258401 coding upstream 188396 1167628 ~ 1190548 (-)
slc5a10 slc5a10 coding upstream 225532 1204764 ~ 1246041 (-)
G369130 NA non-coding downstream 95589 871589 ~ 875203 (-)
G368944 NA non-coding downstream 269504 701084 ~ 701288 (-)
G368912 NA non-coding downstream 297762 671640 ~ 673030 (-)
G368903 NA non-coding downstream 388932 578593 ~ 581860 (-)
G368725 NA non-coding downstream 688889 281439 ~ 281903 (-)
LOC117596193 NA non-coding upstream 287474 1266706 ~ 1270425 (-)
G369243 LOC108258881,LOC108261507 non-coding upstream 297841 1277073 ~ 1277650 (-)
G369298 NA non-coding upstream 386131 1365363 ~ 1375213 (-)
G369297 NA non-coding upstream 390902 1370134 ~ 1396598 (-)
G369302 NA non-coding upstream 405689 1384921 ~ 1385662 (-)
zgc:77849 zgc:77849,LOC108258689,LOC103038624,LOC108439082,LOC107722949,LOC107692663,LOC107590708 other downstream 21989 869759 ~ 948803 (-)
G369125 actb other downstream 55109 911553 ~ 915683 (-)
prkcba prkcb other downstream 268447 653453 ~ 702345 (-)
rasd3 LOC108258668 other downstream 378197 591136 ~ 592595 (-)
pmm2 pmm2,LOC107692644,LOC101469678,LOC102299325,LOC100707130,LOC102200931,LOC107082664 other downstream 680884 284863 ~ 289908 (-)
G369242 LOC108258881 other upstream 296789 1276021 ~ 1276813 (-)
nrp2a nrp2,LOC107556288,LOC107749808,LOC107750056 other upstream 559221 1538453 ~ 1611666 (-)
G369586 NA other upstream 797087 1776319 ~ 1795224 (-)
mdh1b mdh1b other upstream 844972 1824204 ~ 1832729 (-)
LOC113535702 mx1 other upstream 1587525 2566757 ~ 2574471 (-)

Expression


Co-expression Network