slc5a10 (slc5a10)


Basic Information

Item Value
gene id slc5a10
gene name slc5a10
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047620.1
NCBI id CM018566.1
chromosome length 19313417
location 1204764 ~ 1246041 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_034300143.1
CAGCCGTATCCCTCCCTCTCGCCTTCCGTTTTTTCCCTCTCCTTCCATTTCACGTGTGTGTCGtcgagtgtgtggatgggtcaTGGAGTCAAACGCCACCACGAAGTTCTTCGCTCTCTCGCAGTCCTTCAGTTTTTCTGATATCATCGTGATCGGCGCATATTTTCTGCTCAATGTTGCTGTTGGAATATGGtcatcTTGCAGAGTAAGCAGAAACACTCTTAATGGCTACTTCCTGGCTGGCAGAGACATGGCCTGGTGGCCGatCGGAGCGTCTCTGTTTGCCAGTAGTGAAGGATCAGGACTGTTTATCGGTTTGGCCGGCACCGGGGCAGCAGGAGGCATCGCTGTGGCAGGGTTCGAATGGAACGCAACCTATGTACTGTTGGCCCTGGCCTGGATCTTTGTCCCAGTGTATGTGTCCTCTGGGATTGTCACGATGCCCGAGTATCTGGGTCGGCGGTTTGGTGGAGAGAGAATTCGCATGTACCTGTCAGCTCTCAGTCTGATGTTATCTGTGTTTACCAAAATCTCAacaGACCTGTATTCTGGGGCCCTGTTTATTCAGGTGTGTTTGGGTTGGAATCTTTACCTCTCCACCGTCCTCATGCTGGTGGTCACAGCATTCTACACTATTGCAGGTGGTTTAGCTGCTGTGATATACACCGATACACTCCAGACCTTCATCATGATCATTGGCGCAGTCATCCTCACCATAACAGcGTTCAACAAGATTGGTGGTTATGGCAATTTGGAGAGTGTGTACCTCCAGGCCGTGCCGTCGAAGATAATCCCGAACACGACATGCCACCTGCCGCGGCCCGACGCCATGCACCTCTTCCGAGATCCGGTGCATGGAGACCTGCCATGGCCGGGAATGACGCTCGGATTAACCATCCTTGCTACCTGGTACTGGTGTACTGATCAGGTGATCGTGCAGAGATCTCTTTCGGCAAAAAATCTGAGCCATGCTAAAGGGGCATCGATCTTCGCCAGCTACCTGAAAATACTGCCGATGATCTTCATCATCCTTCCTGGCATGATCAGCAGGGCGCTCTACCCAGATTCAGTGGGCTGTGTGGATCCTGAGGAATGTATGAAGGTGTGTGGAGCGGAGGTCGGCTGTTCCAACATCGCTTTTCCCAAACTGGTCATCGAGCTCATGCCTAGTGgactGCGAGGCTTAATGATCGCAGTGATGATGGCCGCCCTGATGTCCTCGCTGACCTCCATCTTTAACAGCAGCAGCACTCTATTCACCATGGACATCTGGAAGAAATATCGCAGAGGAGCCAGCGAGAAGGAGCTGCTGCTAGTCGGCAGGATCGTGACGGTGATCCTCGTCGTCGTCAGCGTGGTTTGGATCCCGATTCTTCAGAGCGCCAACAGCGGGCAGCTCTACGTTTACATCCAATCAGTGACCAGCTACCTGGCCCCTCCTGTTACTGCCATTTTTGTCATGGCAGTATTCTGGAAAAGAACCAACGAGGCAGGAGCGTTCTGGGGTTTGATGGTGGGTCTGGCTGTCGGGGTCACGCGGATGGTTCTGGAATTTGCCTTCCCGCCCCCTCGCTGTGGCATCTTCGACCCTGCGCCGCCCATCCTGCGGCGCGTGCACTATCTGCACTTCGCCATCATCCTCTGCGCCATCACCGTCAtcgtcaccatcatcatcagccTTCTCACACCCGAACCCTCCGAGGAACAGATTCATAACCTCACCTGGTGGACCCTTAGACGCAGTGCTGACAGAGATATACCTCTACAGAAAGTATCAACACTCACTCGGAGAGGAgaggGTTGCGAGTCCGTGTGCAGAGGAAAGTGTGTGCGCACCGCCGGCTTTTGTAGTCCTCGGCCTGGCCGTGGAGCTCCCGGGACTCCGCCTCCCATGAGTCGTAGCATGAGAGAAGACCCATTTTGGTCACGCTTCTGCTGCATCAATGCTGTTATTCTCATGTGTGTTAATATATTCCTTTATGCTTACtatgcataacacacacacacacacacacacacacacacatacacatctaaagtttcaaatgaaatgaaaaaggttTCTAAGATTGGATGGTCAGCTTTGCATAATTTTAAGTACATGGTTTTATATGACATTGCTCAACTGGATTCAGTTAATAGGCTGATAATTAGCTGATCAGGCAGGTTAGAGCAGGAAACACACCGTGACATGCTCATGCTCCTACACACTCGTTCATATACAGAGACGTCCAGATACAAGtccactatatactgtatatatacatatatatatatatatatatgtatatagtatatctgtatatatacaccacTGATTTCAATTGATCAGTTATCAAAATCAAATACAAGTCAGAtaaggtaaggaataaaacacttgggggtgtgcggttataggataataatcaaGCATGGGGCGGCGTGATTGAGTACGAAGTGGAGATACTGATACAGCAACgatttttaatatgttataaaaaaacagcatgtcgtactttttattcgtttatagttacatttgttgttgtggaacgtccgcaAAACGAGTCCTTACTTACGTTGTAGCAAAAATTTTGTCACCAGTTTcggatttttttctctcatgaagataataagacaaaaaaaaaacacctttcatTCATAACAAAGCTctaaaactggagactccttccataaacgtaaAAAAATCACCGTATGACCAattatgcacttttttttaatacgttGATGTGGAGCgcccgccatacaagtccctgtgaatgagctgttgctatagaaacgataacatattagaactgTGTTtagccttctgaccaatcaaatccGAGAATTTAACAGCGATGTTTTATAACTACAGTTAACAAAGGTGTTAATAATAAAGCTAACGATAAGAAAAAGGTCAGCGTGTCGCACAGCTCTCTGTTCTGTAGATTCTGTCTCAAAGCACtggtactggagactccttccatgcatgttaaataaacatctccttacagaaagcctcATCAAAGCAAactctatattttttttctttaaaaatttgtttattattaatcttagattacGTGGCGCGTCCACCTTtttgaattagctgttactatggaaacgagtTAGCTATACTATAACTAGCCTTTTGTTCCGCAACTTTTCGACCAATCAGactccagaattcaacagcgctacGGTTTATTGAACGTTATTTAAGTTTGGTTTAACGCTGTGTGCTAAGAATGTGGACAAAATGTACAATGCAGCAAAGAAACGATCATCCGAGCCCAGTGTTGTGTTGGTTTTAGCTCGTACCTTTCTTGGCTGTGAAGTCAAACGTATGAACCCTGCTGCACTTTATGCAAGCAGAATATCATGATTATTGTTAATGAATAGGGAGATTAGACATCTcaggatggaaaaaaatatgatggaCGGCTTAATCCGTGGAATACATTACGTAATTATTGGAACTGGAAATGCAGATTTACTTAGCTTTTCATCAAATCCTTTTTATTTCAGCGCCTAAATCACTTCCATTTAGTCCTTTAATGCTCCATCGCTTTCACTAAACTACAGGTTAACTACAGGTTATGACACAATGATggtgaattctcgattctgattggtagTAATAGATAGTAACAACTAGAACGACAGCTAGTAACAACTAGTAGCAGCCAGTAAC

Function

symbol description
slc5a10 Predicted to enable glucose:sodium symporter activity. Predicted to be involved in sodium ion transport. Located in extracellular exosome.

NR:

description
PREDICTED: sodium/glucose cotransporter 5

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0005215 transporter activity molecular_function

KEGG:

id description
K14390 SLC5A10, SGLT5; solute carrier family 5 (sodium/glucose cotransporter), member 10

RNA

RNA id representative length rna type GC content exon number start site end site
XM_034300143.1 True 3676 mRNA 0.45 15 1204764 1246041

Neighbor

gene id symbol gene type direction distance location
LOC113535776 LOC108258401 coding downstream 14216 1167628 ~ 1190548 (-)
cacna1hb LOC108258317 coding downstream 91165 1052390 ~ 1113599 (-)
myo15ab LOC108258396,LOC107725350,LOC107692700,LOC108441473,LOC108439093 coding downstream 178743 987755 ~ 1026021 (-)
alkbh5 alkbh5 coding downstream 218194 980870 ~ 986570 (-)
mief2 mief2,LOC108258856,LOC107722977,LOC107725398 coding downstream 225532 970792 ~ 979232 (-)
LOC113535431 LOC108258373 coding upstream 109682 1355723 ~ 1365906 (-)
en1b en1,eng1b,LOC108258368,LOC108437127,LOC102785987,LOC103355596 coding upstream 266280 1512321 ~ 1518371 (-)
pard3ba pard3b coding upstream 372779 1618820 ~ 1738935 (-)
LOC113535707 LOC108258365,LOC108437114 coding upstream 649007 1895048 ~ 1909374 (-)
klf7a LOC108258322 coding upstream 669622 1915663 ~ 1937075 (-)
G369130 NA non-coding downstream 329561 871589 ~ 875203 (-)
G368944 NA non-coding downstream 503476 701084 ~ 701288 (-)
G368912 NA non-coding downstream 531734 671640 ~ 673030 (-)
G368903 NA non-coding downstream 622904 578593 ~ 581860 (-)
G368725 NA non-coding downstream 922861 281439 ~ 281903 (-)
LOC117596193 NA non-coding upstream 20665 1266706 ~ 1270425 (-)
G369243 LOC108258881,LOC108261507 non-coding upstream 31032 1277073 ~ 1277650 (-)
G369298 NA non-coding upstream 119322 1365363 ~ 1375213 (-)
G369297 NA non-coding upstream 124093 1370134 ~ 1396598 (-)
G369302 NA non-coding upstream 138880 1384921 ~ 1385662 (-)
zgc:77849 zgc:77849,LOC108258689,LOC103038624,LOC108439082,LOC107722949,LOC107692663,LOC107590708 other downstream 255961 869759 ~ 948803 (-)
G369125 actb other downstream 289081 911553 ~ 915683 (-)
prkcba prkcb other downstream 502419 653453 ~ 702345 (-)
rasd3 LOC108258668 other downstream 612169 591136 ~ 592595 (-)
pmm2 pmm2,LOC107692644,LOC101469678,LOC102299325,LOC100707130,LOC102200931,LOC107082664 other downstream 914856 284863 ~ 289908 (-)
G369242 LOC108258881 other upstream 29980 1276021 ~ 1276813 (-)
nrp2a nrp2,LOC107556288,LOC107749808,LOC107750056 other upstream 292412 1538453 ~ 1611666 (-)
G369586 NA other upstream 530278 1776319 ~ 1795224 (-)
mdh1b mdh1b other upstream 578163 1824204 ~ 1832729 (-)
LOC113535702 mx1 other upstream 1320716 2566757 ~ 2574471 (-)

Expression


Co-expression Network