cdc37 (cdc37)


Basic Information

Item Value
gene id cdc37
gene name cdc37
gene type misc
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047620.1
NCBI id CM018566.1
chromosome length 19313417
location 18602567 ~ 18609984 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_034300236.1
CGCTCTGTTGTGACGTCGCTGCTAAACGGAAGCGCTGGAGTTTTCCAGAAAACGCTCCgagaaagaagaagagggaAGTTTTACTTCATAACGCGGATTAAATACGTTCTGGAGACACAGGGCGCAGTTTCAGTAGTGTTCTGGTGTTAGTGTATAGATAAAGCCTCTGACTGGACTTTATTATCTGATTTAAAACTGACATTAGGAGCAAAATAATGACCACCATCGACTACAGCGTGTGGGATCATATCGAGGTGTCTGACGATGAAGATGATACTCACCCCAATATCGACACACCCAGCCTGTTCCGGTGGAGACACCagGCTCGAGTGGAGCGAATGGAGGCTTTCCAGAAGAAAGGGGCAGAGCTAGAGAAGAGCCTATTAGAGGCCAAGAAGAAGCTGTTGGAGGCTCAGCGCAGGGTGCAGGAGCTGGAGCGGGCGAGTACGGACAAGGCCAAGAAGGAGCTAGAGGAGGCCAAGACCCAGGAGAAGCAGCTGCGCAAGGAGGAGAGGAGCTGTGAGAAGAAGTTGGAGGAGCACCgcagagaggagaagaagatgCCCTGGAATGTAGATACTCTCAGCAAGGAAGGATTTAGCAAAaGCGTGTTGAACGTAAAGCCGGAGGTGAAGGAGGAGACGGAGGACGAAAAGGAGCAGAAGCACAAGACCTTTGTGGAGAAGTATGAGAAACAGATAAAGCACTTTGgaatgCTGCGGCGTTGGGATGACAGTCAGAAGTACCTGTCTGATAACCCTCACCTGGTGTGTGAGGAGACGGCAAACTACCTGGTTATCATGTGCATCGAcctggaggtggaggagaaacaTGCTCTCATGGAGCAGGTGGCCCATCAGACCATCGTTATGCAGTTCATCCTGGAACTCGCTAAAAGCCTGAAGGTCGACCCCCGAGGCTGCTTCCGCCAGTTCTTCTCCAAGATCAAGacggCAGATCAGCAGTATCAGGATGCCTTTAATGATGAGCTGGAGTCGTTTAAGGAGCGCGTTCGTGGCCGGGCGAAGATCCGCATCGAGAAAGCCATGAAAGAgtatgaggaggaggagaagaaaaaacgCCTCGGACCTGGAGGTCTCGACCCTGTGGAGGTGTATGACGCCCTGCCTCcgGAAATGCAGAAGTGCTTTGATGAGAAAGACATCCAGATGTTACAGGATGCCATCAGCAAAATGGACCCAACGgaggcgAAGTACCACATGAAGCGCTGCATCGATTCGGGTCTGTGGGTGCCGAATTCACGGACAGGCGATgacggagagaaagaggaggagaaggaggaggagcctCAGTatgaggaactgaagacagGAGCTGCTCAGTGAGCCCCGCCCCCTTCAACACATCTCTCCCCTACTACcaattacccacaatcctctgGTCTGCCCTAAAAGCTTTAGAATTAATAAATGCAGAAGCTGTATGGAGTCGTATTTACTGGTGAGGACAcaattacactgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagtgatacAGCTGAAGATCCATGCTAGAAACAAACCACAAACATGAAGCc
>XR_004577335.1
CGCTCTGTTGTGACGTCGCTGCTAAACGGAAGCGCTGGAGTTTTCCAGAAAACGCTCCgagaaagaagaagagggaAGTTTTACTTCATAACGCGGATTAAATACGTTCTGGAGACACAGGGCGCAGTTTCAGTAGTGTTCTGGTGTTAGTGTATAGATAAAGCCTCTGACTGGACTTTATTATCTGATTTAAAACTGACATTAGGAGCAAAATAATGACCACCATCGACTACAGCGTGTGGGATCATATCGAGGTGTCTGACGATGAAGATGATACTCACCCCAATATCGACACACCCAGCCTGTTCCGGTGGAGACACCagGCTCGAGTGGAGCGAATGGAGGCTTTCCAGAAGAAAGGGGCAGAGCTAGAGAAGAGCCTATTAGAGGCCAAGAAGAAGCTGTTGGAGGCTCAGCGCAGGGTGCAGGAGCTGGAGCGGGCGAGTACGGACAAGGCCAAGAAGGAGCTAGAGGAGGCCAAGACCCAGGAGAAGCAGCTGCGCAAGGAGGAGAGGAGCTGTGAGAAGAAGTTGGAGGAGCACCgcagagaggagaagaagatgCCCTGGAATGTAGATACTCTCAGCAAGGAAGGATTTAGCAAAaGCGTGTTGAACGTAAAGCCGGAGGTGAAGGAGGAGACGGAGGACGAAAAGGAGCAGAAGCACAAGACCTTTGTGGAGAAGTATGAGAAACAGATAAAGCACTTTGgaatgCTGCGGCGTTGGGATGACAGTCAGAAGTACCTGTCTGATAACCCTCACCTGGTGTGTGAGGAGACGGCAAACTACCTGGTTATCATGTGCATCGAcctggaggtggaggagaaacaTGCTCTCATGGAGCAGGTGGCCCATCAGACCATCGTTATGCAGTTCATCCTGGAACTCGCTAAAAGCCTGAAGGTCGACCCCCGAGGCTGCTTCCGCCAGTTCTTCTCCAAGATCAAGacggCAGATCAGCAGTATCAGGATGCCTTTAATGATGAGCTGGAGTCGTTTAAGGAGCGCGTTCGTGGCCGGGCGAAGATCCGCATCGAGAAAGCCATGAAAGAgtatgaggaggaggagaagaaaaaacgCCTCGGACCTGGAGGTCTCGACCCTGTGGAGGTGTATGACGCCCTGCCTCcgGAAATGCAGAAGTGCTTTGATGAGAAAGACATCCAGATGTTACAGGATGCCATCAGCAAAATGGACCCAACGgaggcgAAGTACCACATGAAGCGCTGCATCGATTCGGGTCTGTGGGTGCCGAATTCACGGACAGGCGATgacggagagaaagaggaggagaaggaggaggagcctCAGTatgaggaactgaagacagGAGCTGCTCAGTGAGCCCCGCCCCCTTCAACACATCTCTCCCCTACTACcaattacccacaatcctctgGTCTGCCCTAAAAGCTTTAGAATTAATAAATGCAGAAGCTGTATGGAGTCGTATTTACTGGTGTTCTTGGCTATTTCTCCTCACCACATGGTTAATGCTCTCAGATGTCGTTGCTCGCGTGATGTCAGTAATGCagggctgtgattggctgatgattggctgatgaacgcatgattggctggtgtTCGTTAATGAACTCTGTAGCTCCTCCTAGTGGTTTATCACTGAAGTGTGTTGATGACTGGTATTATAAAATTACCATCAGcttgtacagttttatttttctcctcctgTAAGCCAGAGATAAAACACGGATGTCCCACTCGTTTAATTAGCACACAGTCGTGCTCACGCTAGTGCTCCGTTTGTGTTTCATCGATCTTCATGTTCAGGTTCAGACTCGTGTCCTCTTATTTGTACTAGAGCAGTGATGGCTAAATAAAGGTATGCTGTAAACGCA

Function

symbol description
cdc37 Predicted to enable protein kinase binding activity. Predicted to act upstream of or within cell division. Predicted to be located in cytoplasm. Orthologous to human CDC37 (cell division cycle 37, HSP90 cochaperone).

NR:

description
PREDICTED: hsp90 co-chaperone Cdc37-like isoform X2

GO:

id name namespace
GO:0007049 cell cycle biological_process
GO:0051301 cell division biological_process
GO:0019901 protein kinase binding molecular_function

KEGG:

id description
K09554 CDC37; cell division cycle protein 37

RNA

RNA id representative length rna type GC content exon number start site end site
XM_034300236.1 False 1563 mRNA 0.51 8 18602567 18608877
XR_004577335.1 True 1861 misc_RNA 0.50 9 18602567 18609984

Neighbor

gene id symbol gene type direction distance location
LOC117596189 NA coding upstream 74971 18523161 ~ 18527596 (+)
LOC113524839 NA coding upstream 97827 18498988 ~ 18504740 (+)
LOC117596190 gtf3c1 coding upstream 211917 18385927 ~ 18390650 (+)
LOC113524838 bfar coding upstream 227162 18369044 ~ 18375405 (+)
parn parn,LOC108258427 coding upstream 293515 18293758 ~ 18309052 (+)
sp6 LOC108258788,LOC108418435,LOC108418467 coding downstream 54103 18664087 ~ 18674601 (+)
LOC113524847 LOC108258823 coding downstream 424527 19034511 ~ 19105679 (+)
LOC113525760 zgc:76872,zbtb45,LOC108258745,LOC107573833,LOC107572598,LOC107758398 coding downstream 515850 19125834 ~ 19139249 (+)
LOC113525638 zgc:92827,LOC108258818,LOC107665919,LOC107758210,LOC107573835,LOC107668524,LOC107758399,LOC107573875 coding downstream 590043 19200027 ~ 19224919 (+)
LOC117596155 LOC108258581 coding downstream 657499 19267483 ~ 19283319 (+)
G378166 NA non-coding upstream 50695 18550863 ~ 18551872 (+)
G378163 eri2 non-coding upstream 66234 18535651 ~ 18536333 (+)
G378151 NA non-coding upstream 143101 18403834 ~ 18459466 (+)
G378150 NA non-coding upstream 201318 18400593 ~ 18401249 (+)
G378118 NA non-coding upstream 241660 18358478 ~ 18360907 (+)
G378203 NA non-coding downstream 18494 18628478 ~ 18631582 (+)
G378206 NA non-coding downstream 29217 18639201 ~ 18639825 (+)
G378296 NA non-coding downstream 99305 18709289 ~ 18709713 (+)
G378306 NA non-coding downstream 184111 18794095 ~ 18827675 (+)
G378308 NA non-coding downstream 189790 18799774 ~ 18834222 (+)
txndc11 txndc11 other upstream 52598 18382323 ~ 18549969 (+)
G378160 NA other upstream 106524 18494840 ~ 18496043 (+)
G378105 LOC108258757 other upstream 315257 18282994 ~ 18287310 (+)
rdh8b LOC108258824,LOC108258753 other upstream 436342 18158093 ~ 18166225 (+)
G377748 LOC108258742 other upstream 533621 18062418 ~ 18068946 (+)
LOC113525834 LOC108258740,LOC108412431 other downstream 171054 18781038 ~ 18822056 (+)
G378354 LOC108258755 other downstream 327516 18937500 ~ 18942328 (+)
LOC113529661 LOC108258823 other downstream 336098 18946082 ~ 19021923 (+)
G378376 NA other downstream 529821 19139805 ~ 19142137 (+)
LOC113525637 LOC108258744,LOC108413824 other downstream 532697 19142681 ~ 19168611 (+)

Expression


Co-expression Network