Gene
RNA
| Item | Value |
|---|---|
| gene id | G389441 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047622.1 |
| NCBI id | CM018568.1 |
| chromosome length | 15845479 |
| location | 444407 ~ 509731 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU461762 | True | 600 | lncRNA | 0.36 | 3 | 444407 | 509731 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC117596377 | LOC108260518 | coding | upstream | 35851 | 405110 ~ 408556 (+) |
| trnak-uuu_21 | NA | coding | upstream | 126753 | 317582 ~ 317654 (+) |
| rps6 | rps6 | coding | upstream | 154747 | 284647 ~ 289660 (+) |
| LOC113524531 | LOC108260598 | coding | upstream | 263665 | 125116 ~ 180742 (+) |
| LOC113545724 | NA | coding | downstream | 3079 | 512810 ~ 517919 (+) |
| LOC113545735 | NA | coding | downstream | 55106 | 564837 ~ 565963 (+) |
| LOC113545725 | NA | coding | downstream | 214396 | 724127 ~ 727917 (+) |
| LOC113545734 | NA | coding | downstream | 236976 | 746707 ~ 749895 (+) |
| si:dkey-22i16.9 | NA | coding | downstream | 241404 | 751135 ~ 755659 (+) |
| G389500 | NA | non-coding | upstream | 10296 | 418084 ~ 434111 (+) |
| LOC117596380 | NA | non-coding | upstream | 16197 | 427595 ~ 428210 (+) |
| G389498 | NA | non-coding | upstream | 39987 | 403704 ~ 404420 (+) |
| G389492 | NA | non-coding | upstream | 68459 | 339600 ~ 375948 (+) |
| G389442 | NA | non-coding | upstream | 69737 | 352807 ~ 374670 (+) |
| G389505 | NA | non-coding | downstream | 94688 | 604419 ~ 658738 (+) |
| G389506 | NA | non-coding | downstream | 102572 | 612303 ~ 731165 (+) |
| G389515 | NA | non-coding | downstream | 227128 | 736859 ~ 741306 (+) |
| LOC117596382 | NA | non-coding | downstream | 428935 | 938666 ~ 939174 (+) |
| G389542 | NA | non-coding | downstream | 470692 | 980423 ~ 998703 (+) |
| LOC117596315 | NA | other | upstream | 94402 | 348396 ~ 350005 (+) |
| LOC113524533 | NA | other | upstream | 96072 | 333139 ~ 348335 (+) |
| smu1b | LOC108260605,LOC108431794,LOC107720315,LOC107692159,LOC107746727,LOC107551820 | other | upstream | 115916 | 290979 ~ 328491 (+) |
| G389456 | LOC108260598 | other | upstream | 263394 | 99214 ~ 181013 (+) |
| G389524 | NA | other | downstream | 277645 | 787376 ~ 800566 (+) |
| G389525 | NA | other | downstream | 294629 | 804360 ~ 805216 (+) |
| adra1d | adra1d,LOC107689480,LOC107719776,LOC107711521 | other | downstream | 1109566 | 1619297 ~ 1632772 (+) |
| rnf24 | rnf24,LOC107689472,LOC107551705 | other | downstream | 1205534 | 1715265 ~ 1750762 (+) |
| LOC113545784 | clhc1 | other | downstream | 1854823 | 2364554 ~ 2386867 (+) |
