LOC113544399 (sult6b1)


Basic Information

Item Value
gene id LOC113544399
gene name sult6b1
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047622.1
NCBI id CM018568.1
chromosome length 15845479
location 8400794 ~ 8410541 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026943208.2
CTGAGGCTCGTACACCTACTTCCAGAGCAATGCCATTCATCTAAGCTCAGTTGCATAAACAAAGAGGGAACTACCTAAGCAGGGATGCAGAGAGTGGAGACAGTGGAAGACCACAACACAAGCATGAACTCTTTCCCAACCAAGTTCCAGTCCAAAGTAGAGATGGCCAAGAGcatgagagaggaggagaaactCTACAGGTATAATGGTGTACTCTATCCTGTGATCATAAGCCCAGAGGAGAACCTCAGAGCTTTGGAGACTGTAGAGGCACGGAGTGATGATATAATGCTGGTGGCTTATCCAAAATGTGGGTTTAACTGGATGGTCGCAATTCTGCGCAAAATCATAACAGCTAGCACGGGAGAGAAAGTAGAATCCAAGATGCCACCTCTCCTGGAATTCTTTGGACCAGAAACTCTGCAGTTACTTCACCAGGCCCCATCTCCAAGATTACTGGGGACCCATATGCATCCCGATAACATTCCGGCTTCTTTTTACCAAAAGAAAACTAAGATGCTGGTCGTTTTCCGCAACCCAAAGGACACACTGGTCTCATTTTATCACTTTTCAAATAAGAATCCGGTTTTGCCAACTGCTGAGCCCTGGGATCAGTTCTTCATGGATTTTATAAGCGGTGAAGTTCCATGGGGCTCCTACTTTGACCATGCTCTTGCCTGGGAAAAACGCATGAATGACCCAAACATCATGATCATCACATTTGAGGAACTCAAGATGGACCTCAGTGGAAGTGTTCAGAAGGTGGCAGAGTTTTTTGGCTTTAAATTAACTGATGCTCAGATCCAGAGTATTGCAGAGGAGAGTACCTTTGATGCCATGAAAAAAGGCTCCAGAGATTCCCATGGCCAGATGGGAAATGTATTTTTCAGGAAAGGTGAAGTTGGAGACTGGAGAAACCACTTCAGTCAGGCCCAGAGTGAGCAAATGAATGCTGCATTTGAGAAGCATCTTGGAGGGACAAAACTTGGAGCCAGACTAAATTATGATGTGTATTGCAAGTGAAGAAGGGAAACCAGGCACTGTAGTGCAGCAGGGAATGATACCTCAGGGAATGGGAGTACTTCACCTACAGGACagaaccagattttttttctttcacagatTGAGTACATTAAGATTGAAACCAGTTTGGCAAAGATAAGACAGGCTAAAATCACATgattacatacactatatagtcaaatgtatgtggacacttgatcctcacacccatatgtgggccttccccaaactggtgccacaaagttggaagcacacaattgtctagaatgtctctgtatgctgtagcattaagatttcctttcactggcaCTAAGGGGccgaaacctgttccagtatgacaatccCCCGTGGACAAAGTGACAAAACTCTGCACATACAGCAACCTGAGTTCAGGATCAGActagagaccctggagctgtgaggcagcaatgctacccactgtgccactgtgccaccatcagtttgttgttttaataattacatgTAGTTAATTACATTGTCTGAATAAATTTATACACATGATAGTTTTAACAGTT
>XM_026943209.2
CTGAGGCTCGTACACCTACTTCCAGAGCAATGCCATTCATCTAAGCTCAGTTGCATAAACAAAGAGGGAACTACCTAAGCAGGGATGCAGAGAGTGGAGACAGTGGAAGACCACAACACAAGCATGAACTCTTTCCCAACCAAGTTCCAGTCCAAAGTAGAGATGGCCAAGAGcatgagagaggaggagaaactCTACAGGTATAATGGTGTACTCTATCCTGTGATCATAAGCCCAGAGGAGAACCTCAGAGCTTTGGAGACTGTAGAGGCACGGAGTGATGATATAATGCTGGTGGCTTATCCAAAATGTGCTAGCACGGGAGAGAAAGTAGAATCCAAGATGCCACCTCTCCTGGAATTCTTTGGACCAGAAACTCTGCAGTTACTTCACCAGGCCCCATCTCCAAGATTACTGGGGACCCATATGCATCCCGATAACATTCCGGCTTCTTTTTACCAAAAGAAAACTAAGATGCTGGTCGTTTTCCGCAACCCAAAGGACACACTGGTCTCATTTTATCACTTTTCAAATAAGAATCCGGTTTTGCCAACTGCTGAGCCCTGGGATCAGTTCTTCATGGATTTTATAAGCGGTGAAGTTCCATGGGGCTCCTACTTTGACCATGCTCTTGCCTGGGAAAAACGCATGAATGACCCAAACATCATGATCATCACATTTGAGGAACTCAAGATGGACCTCAGTGGAAGTGTTCAGAAGGTGGCAGAGTTTTTTGGCTTTAAATTAACTGATGCTCAGATCCAGAGTATTGCAGAGGAGAGTACCTTTGATGCCATGAAAAAAGGCTCCAGAGATTCCCATGGCCAGATGGGAAATGTATTTTTCAGGAAAGGTGAAGTTGGAGACTGGAGAAACCACTTCAGTCAGGCCCAGAGTGAGCAAATGAATGCTGCATTTGAGAAGCATCTTGGAGGGACAAAACTTGGAGCCAGACTAAATTATGATGTGTATTGCAAGTGAAGAAGGGAAACCAGGCACTGTAGTGCAGCAGGGAATGATACCTCAGGGAATGGGAGTACTTCACCTACAGGACagaaccagattttttttctttcacagatTGAGTACATTAAGATTGAAACCAGTTTGGCAAAGATAAGACAGGCTAAAATCACATgattacatacactatatagtcaaatgtatgtggacacttgatcctcacacccatatgtgggccttccccaaactggtgccacaaagttggaagcacacaattgtctagaatgtctctgtatgctgtagcattaagatttcctttcactggcaCTAAGGGGccgaaacctgttccagtatgacaatccCCCGTGGACAAAGTGACAAAACTCTGCACATACAGCAACCTGAGTTCAGGATCAGActagagaccctggagctgtgaggcagcaatgctacccactgtgccactgtgccaccatcagtttgttgttttaataattacatgTAGTTAATTACATTGTCTGAATAAATTTATACACATGATAGTTTTAACAGTT

Function

symbol description
sult6b1 Enables sulfotransferase activity. Acts upstream of or within cellular response to xenobiotic stimulus. Predicted to be active in cytoplasm. Is expressed in several structures, including EVL; digestive system; ectoderm; forerunner cell group; and tail bud. Orthologous to human SULT6B1 (sulfotransferase family 6B member 1).

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0042221 response to chemical biological_process
GO:0008146 sulfotransferase activity molecular_function

KEGG:

id description
K22523 SULT6B1; sulfotransferase 6B1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026943208.2 True 1559 mRNA 0.44 7 8400794 8410541
XM_026943209.2 False 1517 mRNA 0.44 7 8400794 8410541

Neighbor

gene id symbol gene type direction distance location
chs1 chs2 coding upstream 11347 8378414 ~ 8389447 (+)
LOC113544353 LOC108260790,LOC108260789 coding upstream 50668 8329665 ~ 8350126 (+)
LOC113544354 LOC108260789,LOC108260790 coding upstream 99783 8289291 ~ 8301011 (+)
ddx21 ddx21,LOC108414772,LOC106612469,LOC107725010,LOC107693788,LOC100194728 coding upstream 121334 8263979 ~ 8279460 (+)
si:ch1073-291c23.2 LOC108260910 coding upstream 148127 8240639 ~ 8252667 (+)
slc30a6 slc30a6 coding downstream 3932 8414473 ~ 8437196 (+)
LOC113544248 LOC108260666 coding downstream 64343 8474884 ~ 8486535 (+)
LOC113544387 sptbn1,LOC108260989,LOC108414519,LOC105890945 coding downstream 85535 8496076 ~ 8583090 (+)
slc12a10.1 NA coding downstream 198926 8609467 ~ 8623393 (+)
nvl nvl,LOC107558213 coding downstream 251703 8662244 ~ 8685925 (+)
G394262 NA non-coding upstream 115455 8285006 ~ 8285339 (+)
G394260 NA non-coding upstream 120590 8279534 ~ 8280204 (+)
G394229 NA non-coding upstream 165634 8234679 ~ 8235160 (+)
G394156 NA non-coding upstream 247016 8152460 ~ 8153778 (+)
G394155 LOC108413271 non-coding upstream 248406 8151403 ~ 8152388 (+)
G394291 NA non-coding downstream 10141 8420682 ~ 8440437 (+)
G394306 NA non-coding downstream 55728 8466269 ~ 8466602 (+)
G394373 NA non-coding downstream 250155 8660696 ~ 8661230 (+)
G394520 NA non-coding downstream 442003 8852544 ~ 8852767 (+)
G394527 NA non-coding downstream 502339 8912880 ~ 8913084 (+)
G394251 NA other upstream 141492 8258928 ~ 8259302 (+)
G393467 slit1 other upstream 969884 7427618 ~ 7430910 (+)
LOC117596330 NA other upstream 1499854 6896993 ~ 6900940 (+)
LOC113544406 LOC108260665,LOC108260638 other upstream 1782112 6614859 ~ 6618682 (+)
lrba lrba other upstream 2161716 6039414 ~ 6239078 (+)
LOC113544250 NA other downstream 725416 9135957 ~ 9140298 (+)
fam135a fam135a other downstream 1537200 9947741 ~ 10050101 (+)
agpat4 agpat4,LOC107739871,LOC107553196 other downstream 1690396 10100937 ~ 10116924 (+)
LOC113544300 NA other downstream 1788782 10199323 ~ 10239199 (+)
G395242 NA other downstream 2096049 10506590 ~ 10516369 (+)

Expression


Co-expression Network