tmem64 (tmem64,LOC107696193,LOC107584320)


Basic Information

Item Value
gene id tmem64
gene name tmem64,LOC107696193,LOC107584320
gene type misc
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047623.1
NCBI id CM018569.1
chromosome length 15305753
location 7869403 ~ 7917693 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU476884
GGGCAATATTAGCTATTTAGCTAGTTACCAATGTGGTGATTAGTTGTTTGCTTTACATAAGAACaatattagctagttagctagttaacaaCATGGAGATTTTGTATCCCTTTTTCGGATTTTTTtttttttttttttttttatataaaccttTTGCAGTCTTTCAATGTCACTAATTCTTAGCATCAACACTATTACATGGCAGTTCCTTTAGTTGGAATGCCTTTCTCTTTTTCCGTCTTCTGATGACCTTGAAAGCCATATGACCAGCGGCAAGCCActaatgaatgattttaaagttagaaagaaaaaaaaaaacgagtatGACTTAGCTtacctttaaaatgtttatgcaaCAGAGATGAGTAGGTTTAAgttctgtatatttgtatatacacagggatggacaaatcataaattcattagcagTCCACTGAGCAAGTTTTGGTTGTCTGGAAACCTGACTAGGCTAACGTAATGTATGCTAATAACATATTTCATGCTAGTTAATTAGTAAAGGGCATAAATAAAGACTAAGCGAGACAAACAAGTATATGATACTTTTCCTTATATAAGAACGTTTTAATGTAGCACACTGTGTTTGTGCTCTCGGAAAGTCATTGGCGAACGTTTGGTTCTGTCCTCACACCACAGGTAAAAATATTGTCCGAGTCTGACCAGcgtctttctttctctcgacATGTTCATATACAACAGCTTTGCACTGGGCTTCACTGTTTCCATATGCATGTTCTGAAAAGATTATTCTACTGACAACCACATCGCTCTCCTCAGgagatgtgtgtagtgctgCAGGCGGTGGGATTCGTAACGATTAGCTCGATTATAGTTACAGTAACGAGGTGCGTCACATCACAATAAGCCGCATTatgtttacataaacacacacatcatatgaAACGGCATGCAACTACGAATTAAAAGTAACATCGCGGCGGCAAAATCTGCTTGTCCAAGGCACCCAGgttactgatttgtccacccctgaaaAGCTTTTAACTATTATCTGCTATAACTGTTGTTCATTTGTTACaatacaagattttttttttaacttggcCTTTAGTTTTTGACTTTTTAGTGTTCACCTACTACGTATCTGGAATCATCCATAATTTTGTCGACTCTACTTCTAACCTGACAGTCGACAGGTGTGTGAAAGGTTAGTCATTTTGAAATCCATGCCACATTacttgtccatttttttttgacatccTAATTCCaatgttgttgctgctgcttaGACCCCAGGGTCTGAGTGAAATGCTGATAAGGGCTCGAATATTTACACATCAACTTCTACACTTATCTTTACAGGctcatattaatataaatggcTATAAATTAGCCTATGAACTTTTATAACAGTTTGGTACATCAGTTTTCACACTTGCATGTTGTATGAAATGGCACACAAAAATGGACATTCCttgctgatatttctgtccAGATCAGTTTGAAGTAGGAATGTCCCCTCCATAAATTTAGCAATAACTGGAAACAGAAATGTCCTTGAGTTAGGTAGAGAAATGCAACATTCCTGGTCTTGTGTTATGATGTCAGCCTGCCTTGTACCTCTTGCTGCCTATGACAGGACATGACACTAGCCTGTGGCATGATCATACACCAAGTTCAtggaaatgaatattaaaaaaaaaaagatataagaTGTCGaatgcaaaaaaaggaaaagaaattacAAACTATTTAATGGGTAAATGGGTTTTAcacatagtatttttttttgttgttgtttaatcgATATTTCTGACATAATTATGCAACAGAGGAACTCTATAAATCTGACATGGGGATGAAATGACATGGTTCTTGGCGAGGATTTATCTGAGATTGcacacacagctacagcacATCAGAAACCCAGTGCACATGTGATTTCAGATAAATACAAATCAGGGACCGTTACGAAACCTCTGCCCCATGAATCAAGTGCATTTATCAATTCCGCTGTATTTTGTAATACAGAT
>XM_026942388.2
TTGAGGTGCGTGGCATTCTGGGAAATAAACAGTGGTAcgttagcagcagcagcagtgtcgGAGTGCGTCTTGTGTGCGGTGGTGGGGTTCAGTCCTGACTActggaaatgtttgtttaacCAGCACATGCCACTGAGTGGGTTTATTTGTGTATTCACACAGTGACAGGGGGAAAGTGCTCTTACCCGCTCAGGCGGAATGATGGAGCACAGCAGCAGGACTTTGTACCCGAGCGCGAGCGCTGCAgcgcagtgattttttttttttgctgaaagtTGGACATTTGCTCTGATATTTTTCGTCTTTAATTAAACCGCAGCATGTTGGATTAAACTCTGGGCTCTGGTTCTAGCAGATATCGGAGTTTGCACGCCGATcctgtgtgttgtttttaatgtaaacatggTGGACGTGGTGGAGGCAGAAGGCGCGCGCGGCGGCGGGGTGTCGCGTTCACGTTAACGTTATGGCGTTTATTACCGACCCGCAGCCACAGTCCCTGACGTGGGAATGACTCTAAAGCGGCGGATGTGCTGGACACTGACGAGTCTCATTAGATTTTCTCACCACAAACTGCTGACCAGGAGCAGGTCGTGCTGTGGTTCACGACGCCTTGCACGACGACTGCGTTGATTAGTAGTAGTGTTAGTGTTATCGTTTATTTCTGAGTAGAAGCCGCGCTGAAGGTTGACTTTTCTGAGCACTGCGATCATGTGGAGTCTAGCCACGGCAGCGCTGCAGCTTCTGCTCAAATCGGTGAAGCACGCCGCGGGGAAAGGACACATGCAGCTGAACCGGTGGCTGCAGCGGCCGCCGGACTCCGTGGACTGCGAGAAGATGGAGCTGCTGATGTGCAGCGCGGGCAGGGCGGACATGGAGCCGGGGGGCACCGGAGAGCCCGTGCCGCCCTTCACTTCAGCAGACTTGAGGAATCCGTGCTGCATCGCGACCTGTTGCTTCAAGAGCGCGCTGCTGGCGTGCGTCCTGACCGCCGCGTGCTTCTTCTCGGTCACGCTCGTGCGCCGGTACCTGAAGGACGCGCTGCTCTGGGTGGAGAGCTTGGACGGCCTCATGGGCGCGATGCTGTTCATCGTGTGCCTCATCACAGTGTCGTTCCCCTGCGGCTGGGGCTACATGGTCCTGAACGTGGCCGCGGGTTACCTGTACGGCTTCGTGCCCGGAGTGGGCCTGGTGATGGTGGGAGTGCTGATCGGTACCTCGGTGGCGCATGTGGCGTGCAGGCGGCTGCTCTCCGGCTGGGTGATGAACCGCGTGGGGAACAACGAGCAGCTCAGCGCCGTCATCCGGGTGGTGGAGGGAGGCAGCGGACTCAAGGTGGTGGCGCTGGCCAGACTAACCCCCATCCCATTCGGCCTCCAGAATGCTGTGTTTTCGATCACAGACGTGTCCTTGCCAGACTACCTAGTGGCTTCATCAGTGGGCCTGCTACCCACTCAGCTCCTCAACTCCTACCTGGGCACCACACTGCGCACCATAGAGGACGTTATAGCCGAGCAGAGCATCAGCGGATACTTTGTGTTCAGTCTACAAATCTTTATCAGCATAGGGCTGATGTTTTACGTCGTGCACCGAGCGCAGGTGGAGCTGAACGCCGCCATCGCCGCATGCCAAATGGAGATGAAAACATCACATATGAACGGCAACATGTCAAACCACGGCAGCTCCACATACTGCAGCAAGCGGACCTCGGCGTGCGGGGGGATTAACATCGTCTGACACTTAACAGTGACATTTATGCTGGTTTGAAGTGTATTAACACGCCCTTTTTACAGTGGCGCGGTACTGACGGAAGACGATCAGGCTAAAGATGGCGTCTGAGGCCAGAGGTATGCCCGTTCAGGttcagtgctggtgtgtgatCTGAGAAGACAGCGCTGGTTTTGGAAATTCTCTCCGAAGTGCTACAGGAGGCCAGTATTTTGTACTGCAAGACAAAGTTTGAATAGAGCCTAATAGTTTCTTTTGggactttttgttttgaaacgattatttttttatagagtATGGATttaaattagaatttttatatATCTAGAGCAGGTGTCGAGCATGTGATTTAGAGAGAACACTACAGTATTGTGCAGTAAAGAGACAGCTGCTGATGTAAATGCTATATATTGTCATATGCTTTTagtaatacattttacatttgcttTTGGTACTTTTCCAGATCATaatgtttgttgttgttattattattattattattattattattagagaagACATACCACCTGGCTAGAAAACGGTTGCTTTATGCCAAACCGGGATCACATTTGCAGTTCTTCACTTCTGCTAGGAACAGATGGAAAGGAAGGCAAATTTCCCAGCAGGGTATTTAACAGTGTCCTGCCAAGATCCGCCAAGTGCAGCGTGATGAAACAGAACAGCAGGATCTTATCCGTGTTCAGTCTCTCATAATGTTGCTTGGACAGGATGGTGGGCCTTTCTTTATCTTATTTAACCAAATGTGTTATAGGGCTGCTGTAAACCCGTTTTTATCAAGTTTGCCTTTTAATTTGGAACTGATTTCCATTACATTATTTATCGTGTGCAATACGTGTGTTAGGCTGTCACTGTTAATATTTCAGGTAAATTATAAACATCAaaaaagtgaaggaaaattaGTATTCAcatattttgcttatttaagTTGGAtggttaattaatattattattaaaattactatAATCAATTCATGGgattaaatattagaaatgcAGAAATTATTTATTGGTGAGGTTAAGTGGCACTTTAAACCtaaccctgcgttcacactCGCAAGTGACAAAGCAGCAGGCATCCATTCATTTACTACGTACATTCGCAATACGAAGCCATGATTTCAGCGACAAGCGACATTTTATTAGGATTTTCACAATTCTTCTCAAATGATTTGGTACAGCAACAAATTCGAACAattggctcaaatgattcctcagaccaatcctatggtgtgtgtgtggtctgacgtttcttcagttcccccactcacaactttagctttagcagttagttcctgttaactGTTTGGCTCACAAAAATTAGAagtgtggtttcatcttatcctgtcacaTATggcctctcattaaatgtgtatagagacatgaCATGAAGGAACAGAGGTCAGTGATGATAATGAGATCAGTGATGTATAACTCGTATAGCAGGATGTCGGCTATACATTTTGGCTGCTCTCTTTCTCATCAGACATAAACACTGGACAGTACACACCtacaaacaacaacagtagtgtttgcttcacacacacaagagacaaactacaagcgatACAAGTGACTTGTCATTTGCTAATGTGAACATAGGGTTAATTATAATTTTGTTCATGAATATATCAGTGAAACGTTTGCACAAATCTTCCACAGTATCCGCTCTTCTCCCCAAGACCACCACGAACGAGTGGCTAACCTTATCAAAACTGTTGCCTATAAGTTGCCCGGCCATGGAAGAAGACTTGTAGATTTTTTTAGATATAAATGCCTCCAGAATGTTCCCTGACTTAATCTGAGCTGTTTAAACTAGCCCTCGGTTTTGTCTTAATGGGCTGAGTGCTCTGAGCACGGTGTTTCTCCTACCCCAGAGATCTCCTGGGTCGATTAGTCCTTGGAGTCTATATTCCCACAACACGAACAACCAAGAGGCTGTTATTTTCCTGTGGAAACACACAAATCAGTTTGAGATTAGACACAGTCTCGGTGTTCAGGGAAAAGATTTATGTACTAGTGCCCTGGTTTGACGaagactttgtttttttttttttttttttttttttttttatataaaccttTTGCAGTCTTTCAATGTCACTAATTCTTAGCATCAACACTATTACATGGCAGTTCCTTTAGTTGGAATGCCTTTCTCTTTTTCCGTCTTCTGATGACCTTGAAAGCCATATGACCAGCGGCAAGCCActaatgaatgattttaaagttagaaagaaaaaaaaaaacgagtatGACTTAGCTtacctttaaaatgtttatgcaaCAGAGATGAGTAGGTTTAAgttctgtatatttgtatatacacagggatggacaaatcataaattcattagcagTCCACTGAGCAAGTTTTGGTTGTCTGGAAACCTGACTAGGCTAACGTAATGTATGCTAATAACATATTTCATGCTAGTTAATTAGTAAAGGGCATAAATAAAGACTAAGCGAGACAAACAAGTATATGATACTTTTCCTTATATAAGAACGTTTTAATGTAGCACACTGTGTTTGTGCTCTCGGAAAGTCATTGGCGAACGTTTGGTTCTGTCCTCACACCACAGGTAAAAATATTGTCCGAGTCTGACCAGcgtctttctttctctcgacATGTTCATATACAACAGCTTTGCACTGGGCTTCACTGTTTCCATATGCATGTTCTGAAAAGATTATTCTACTGACAACCACATCGCTCTCCTCAGgagatgtgtgtagtgctgCAGGCGGTGGGATTCGTAACGATTAGCTCGATTATAGTTACAGTAACGAGGTGCGTCACATCACAATAAGCCGCATTatgtttacataaacacacacatcatatgaAACGGCATGCAACTACGAATTAAAAGTAACATCGCGGCGGCAAAATCTGCTTGTCCAAGGCACCCAGgttactgatttgtccacccctgaaaAGCTTTTAACTATTATCTGCTATAACTGTTGTTCATTTGTTACaatacaagattttttttttaac

Function

symbol description
tmem64 Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human TMEM64 (transmembrane protein 64).

NR:

description
PREDICTED: transmembrane protein 64

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU476884 False 2009 lncRNA 0.37 2 7869403 7917693
XM_026942388.2 True 4753 mRNA 0.45 3 7870336 7887855

Neighbor

gene id symbol gene type direction distance location
bag6l bag6,LOC107687076,LOC107745707 coding downstream 11204 7844463 ~ 7858199 (-)
abcf1 abcf1,LOC107745711,LOC107691519 coding downstream 49692 7804783 ~ 7819711 (-)
ppp1r10 ppp1r10,LOC107709274,LOC107745712,LOC107691520 coding downstream 70738 7788909 ~ 7798665 (-)
agr2 agr2,LOC108273355,LOC108433813,LOC107584355,LOC107745729,LOC107687097,LOC107562756 coding downstream 85342 7781915 ~ 7784061 (-)
khdrbs1b khdrbs1,LOC103045134,LOC103472039,LOC106924560,LOC106945640 coding downstream 113342 7744824 ~ 7756061 (-)
pip4p2 tmem55a,LOC107702130 coding upstream 9752 7927445 ~ 7938210 (-)
smap2 smap2 coding upstream 476830 8394523 ~ 8417397 (-)
col16a1 col16a1,LOC108272916 coding upstream 534393 8452086 ~ 8544860 (-)
adgrb2 adgrb2 coding upstream 697312 8615005 ~ 9005331 (-)
lratd2a LOC108272401 coding upstream 1663519 9581212 ~ 9582892 (-)
G401835 NA non-coding downstream 41740 7815999 ~ 7827663 (-)
G401813 NA non-coding downstream 127646 7739349 ~ 7741757 (-)
G401812 NA non-coding downstream 130159 7738610 ~ 7739244 (-)
G401811 NA non-coding downstream 130961 7735631 ~ 7738442 (-)
G401815 NA non-coding downstream 161212 7707862 ~ 7708191 (-)
G402090 NA non-coding upstream 404463 8322156 ~ 8324199 (-)
G402120 NA non-coding upstream 502694 8420387 ~ 8448303 (-)
G402122 NA non-coding upstream 516151 8433844 ~ 8436904 (-)
G402129 NA non-coding upstream 531802 8449495 ~ 8508126 (-)
G402142 NA non-coding upstream 603665 8521358 ~ 8522044 (-)
fndc5b fndc5b,LOC108272379,LOC108433842,LOC107584283,LOC107691512,LOC107687074,LOC107562878,LOC107709291 other downstream 592621 7254433 ~ 7276782 (-)
polr1h znrd1,LOC107677479,LOC107754832,LOC107584303,LOC107694346 other downstream 1494903 6371617 ~ 6374500 (-)
G401205 nelfe other downstream 1694143 6172988 ~ 6175260 (-)
G400815 NA other downstream 2279656 5587398 ~ 5589747 (-)
LOC113543870 LOC108272368,LOC108261349,LOC108261350 other downstream 2729023 5128235 ~ 5140380 (-)
G402673 NA other upstream 1226177 9143870 ~ 9161470 (-)
runx1t1 runx1t1,LOC107702085,LOC107653844 other upstream 1309702 9227395 ~ 9284493 (-)
triqk triqk,LOC107710222,LOC107724370,LOC107702072 other upstream 1469302 9386995 ~ 9416253 (-)
si:ch73-347e22.4 NA other upstream 3859676 11777369 ~ 11790179 (-)
grin2da LOC108272392,LOC108439895,LOC107693370,LOC107589385,LOC107739517,LOC107599531,LOC107724118,LOC107656604 other upstream 4227905 12145598 ~ 12256372 (-)

Expression


Co-expression Network