G404644


Basic Information

Item Value
gene id G404644
gene name NA
gene type unknown
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047623.1
NCBI id CM018569.1
chromosome length 15305753
location 12430995 ~ 12483898 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU480085
TACCTATGCAGCTTGCTGAGAATTTCTGCGATCTGCTTCAGGGACCCTGATGGCCGCGGTGGGTGCGCATTTTGCGGCTGAGCGTGCGCGCAATGCGGTCCACTGCATTGCCAATGTGGCCCATCTCCTTGCTTGAAGTCAGGCCTTCGATGTTGCCGCTGTACCACATCACCCAGCCACCAAGCGACATCAACACCAGAAGAGCTCCTGTGTACACTAACAAGTCACCAAAGTCTCTGCCTTTCACCTCCAGAGGAACGAAGACTCCCGCGAGCAACACCATCACGCCCACTAGGTCAAAAATGACCGCAAATGCCAGCGCCACTTTGCAGTGTGCCAGGCCCGTGCAGGACGTCATACTGACTGGGTCAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU480085 True 373 TUCP 0.56 2 12430995 12483898

Neighbor

gene id symbol gene type direction distance location
ccdc106b cc106,LOC108273335 coding downstream 3606 12420503 ~ 12427389 (-)
u2af2b u2af2,u2af2b,LOC103026862,LOC107656609,LOC108439900 coding downstream 16203 12399540 ~ 12414792 (-)
cnot3b LOC108272956,LOC108439899,LOC107656608,LOC107739521,LOC107599539,LOC102215018 coding downstream 39633 12355242 ~ 12391362 (-)
shisa7b LOC108272955,LOC108439898 coding downstream 82423 12329158 ~ 12348572 (-)
znf865 znf865,LOC108272906,LOC108439897,LOC107724093,LOC107589382,LOC107599536,LOC107656606,LOC105902018 coding downstream 113104 12308795 ~ 12317891 (-)
si:ch211-288g17.3 LOC108273223 coding upstream 152952 12636850 ~ 12649319 (-)
kmt2ba LOC108272954,LOC107701550 coding upstream 203864 12687762 ~ 12724515 (-)
ndufv1 ndufv1,LOC108437925,LOC103023083,LOC107693353,LOC107589403,LOC107101109 coding upstream 277814 12761712 ~ 12770681 (-)
hcn3 hcn3,LOC108437924,LOC107739502,LOC102783101,LOC103358769,LOC102202422 coding upstream 288023 12771921 ~ 12783866 (-)
si:ch211-81a5.8 NA coding upstream 306898 12790796 ~ 12793315 (-)
G404421 NA non-coding downstream 155493 12275268 ~ 12275502 (-)
G404282 NA non-coding downstream 305155 12125457 ~ 12125840 (-)
G404243 NA non-coding downstream 430485 12000266 ~ 12000510 (-)
G404241 NA non-coding downstream 433525 11997070 ~ 11997470 (-)
G404235 NA non-coding downstream 460031 11970742 ~ 11970964 (-)
G404667 NA non-coding upstream 30573 12514471 ~ 12515210 (-)
G404681 NA non-coding upstream 91182 12575080 ~ 12577284 (-)
G404682 NA non-coding upstream 92634 12576532 ~ 12578806 (-)
G404687 NA non-coding upstream 105374 12589272 ~ 12591533 (-)
G404692 NA non-coding upstream 117734 12601632 ~ 12635213 (-)
grin2da LOC108272392,LOC108439895,LOC107693370,LOC107589385,LOC107739517,LOC107599531,LOC107724118,LOC107656604 other downstream 174623 12145598 ~ 12256372 (-)
si:ch73-347e22.4 NA other downstream 640816 11777369 ~ 11790179 (-)
triqk triqk,LOC107710222,LOC107724370,LOC107702072 other downstream 3014742 9386995 ~ 9416253 (-)
runx1t1 runx1t1,LOC107702085,LOC107653844 other downstream 3146502 9227395 ~ 9284493 (-)
G402673 NA other downstream 3269525 9143870 ~ 9161470 (-)
fam131ba fam131ba,LOC108272563,LOC108439905 other upstream 31418 12515316 ~ 12553760 (-)
trnav-cac_22 NA other upstream 86566 12570464 ~ 12570536 (-)
trnav-cac_23 NA other upstream 87695 12571593 ~ 12571666 (-)
trnav-cac_24 NA other upstream 89701 12573599 ~ 12573671 (-)
trnav-aac_24 NA other upstream 90842 12574740 ~ 12574815 (-)

Expression


Co-expression Network