G405961


Basic Information

Item Value
gene id G405961
gene name NA
gene type unknown
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047623.1
NCBI id CM018569.1
chromosome length 15305753
location 14967476 ~ 15013988 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU481617
AATCCCCCGCAGTCTTCATGCTCTTCTTTAACCAGCCTTCAGCTCCGAGCAAACAAACTCCTCGCTAACTTTTCCCTTTCAgctcactctctcctctcctcctctcctcctctccgtctctccgtctctcctctACTCCACTCCTCCGCTGTGCCTCATGGATGTGGATGTGTGACTCCAGCAGAGCCGCACTCGTGTCCGGGCGGCGGCAGCAGGCGGGCCGGGGCCGGGGCCGGGGCCGGGGCGAGGCGGGGAGGCAGAGCGCTTCCGCGGGGTTACTGTGTGCCTGTGCGGGCGCCGGGGCCTCAGCGCTGCTCGCTCAACTACTGATAGTTTGGTCGCGTTACGGAGCCGCACCGCGTCATTCTGACGGTCAGAACACACCGTGTCCGGAGagtaaagtatataaatatataaatctctctctgtgtgtagtgtctgagtttctctctctctctctctctctctctctc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU481617 True 473 TUCP 0.59 2 14967476 15013988

Neighbor

gene id symbol gene type direction distance location
cica LOC108272903,LOC108433746 coding downstream 2665 14931143 ~ 14964811 (-)
si:ch211-264f5.6 NA coding downstream 49559 14897610 ~ 14917917 (-)
gnb3b gnb3b,LOC108433753,LOC107666347,LOC107665150,LOC107753988,LOC107727720,LOC107563025 coding downstream 99878 14860254 ~ 14867598 (-)
daxx daxx coding downstream 297436 14652344 ~ 14670040 (-)
ctdp1 ctdp1,LOC107552301,LOC107550068 coding downstream 330143 14622681 ~ 14637333 (-)
LOC113534955 LOC108272455,LOC108433744,LOC107753802 coding upstream 59681 15073669 ~ 15136790 (-)
atp1a3a LOC108433742,LOC108272709,LOC102313318,LOC102779181,LOC103362864,LOC100707930 coding upstream 151200 15165188 ~ 15206951 (-)
G405906 NA non-coding downstream 1365 14644853 ~ 14966111 (-)
G405924 LOC108272765 non-coding downstream 160617 14805181 ~ 14806859 (-)
G405930 LOC108272765,LOC107694750,LOC107751686,LOC107577321,LOC107694162 non-coding downstream 214184 14749754 ~ 14753292 (-)
G405929 NA non-coding downstream 219029 14746848 ~ 14748447 (-)
G405909 NA non-coding downstream 246570 14688023 ~ 14720906 (-)
G405967 NA non-coding upstream 4698 15018686 ~ 15019240 (-)
G405976 NA non-coding upstream 34733 15048721 ~ 15049178 (-)
G405981 NA non-coding upstream 37701 15051689 ~ 15051897 (-)
G405982 NA non-coding upstream 37967 15051955 ~ 15052188 (-)
G405983 NA non-coding upstream 38599 15052587 ~ 15052844 (-)
tpbga LOC108272337 other downstream 488399 14475476 ~ 14479077 (-)
G405588 NA other downstream 847818 14114619 ~ 14119658 (-)
npy npy other downstream 883630 14081372 ~ 14083846 (-)
s100a11 s10ab,LOC105901467,LOC102790362,LOC105028986,LOC106570111 other downstream 1205919 13759761 ~ 13761557 (-)
cks1b cks1b,LOC108433716,LOC107753514,LOC106570108 other downstream 1408845 13556156 ~ 13558631 (-)

Expression


Co-expression Network