G406083


Basic Information

Item Value
gene id G406083
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047623.1
NCBI id CM018569.1
chromosome length 15305753
location 15271673 ~ 15272249 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU481745
ttcagttatgctgtcatagctagtcttgccggagtccctgcttgcactctgcatgcaaagtacatcgtgcttaaccattagaggacaaaagctcacctaacaatctcttcctttctctccatctctctctctccctcactctctgtcgagctacacatgctacttctgagatgccagtgatgccagtgatcctgaccccttctgctcctcctcgctgcctgacccatcctgatgccctacttctggttggagttctcatcggttgagttcgctcgctgctgctgggggtggccccatatggacggcctgaagaactgtttggattgctggggatggtgccacctgggggctgtggagatggcttggggatcacatatggggagctgtactgtaatggcttgggactgtgattgctgtagtggctttggggctgcagttgccacgagcagcttcgtactcaggactccatcagtggacagtggatagattttaaccagccggacctcttgcaaatactgcgatgaatttattggttgcacaattgcactatttgtccatatagtacacaatagaaggg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU481745 True 577 lncRNA 0.51 1 15271673 15272249

Neighbor

gene id symbol gene type direction distance location
atp1a3a LOC108433742,LOC108272709,LOC102313318,LOC102779181,LOC103362864,LOC100707930 coding downstream 64722 15165188 ~ 15206951 (-)
LOC113534955 LOC108272455,LOC108433744,LOC107753802 coding downstream 134883 15073669 ~ 15136790 (-)
cica LOC108272903,LOC108433746 coding downstream 306862 14931143 ~ 14964811 (-)
si:ch211-264f5.6 NA coding downstream 353756 14897610 ~ 14917917 (-)
gnb3b gnb3b,LOC108433753,LOC107666347,LOC107665150,LOC107753988,LOC107727720,LOC107563025 coding downstream 404075 14860254 ~ 14867598 (-)
G406079 NA non-coding downstream 13728 15257725 ~ 15257945 (-)
G406078 NA non-coding downstream 14619 15256802 ~ 15257054 (-)
G406054 NA non-coding downstream 64142 15207201 ~ 15207531 (-)
G405983 NA non-coding downstream 218829 15052587 ~ 15052844 (-)
G405982 NA non-coding downstream 219485 15051955 ~ 15052188 (-)
G406086 NA non-coding upstream 759 15273008 ~ 15273429 (-)
G405961 NA other downstream 257685 14967476 ~ 15013988 (-)
tpbga LOC108272337 other downstream 792596 14475476 ~ 14479077 (-)
G405588 NA other downstream 1152015 14114619 ~ 14119658 (-)
npy npy other downstream 1187827 14081372 ~ 14083846 (-)
s100a11 s10ab,LOC105901467,LOC102790362,LOC105028986,LOC106570111 other downstream 1510116 13759761 ~ 13761557 (-)

Expression


Co-expression Network