oxnad1 (oxnad1)


Basic Information

Item Value
gene id oxnad1
gene name oxnad1
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047623.1
NCBI id CM018569.1
chromosome length 15305753
location 13925835 ~ 14000665 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026928259.2
AGTTCTAGTTACCGATAACTACTTCCGGTTCACGGCTGTGTTTCCTAAGAGCACGACAGAGGTTAAATAGCCATGCTTTAACACAGTCACTGAAGACTACAAATATACTGAATGCGGATTACGTTGTGAATATATGTTTTCGGGTAACTTCCTAGTGCAAACTCCAGCTCCAGCGCAATGAGCCTGCGGTGTGTTTTAATTACTGCTCGGTGTTTTGCTGGTGCTTCGCGGTCACTACGAGCCACATCTAACCTATTATGTTCATCGAGaaaCATGTCATCACGACAAGCTGATCACCTTGAAAGGACAGCTAGTGTTCACAGACAGAAGgccaCGTTCTCAGCACGAGTTTGTGCCATTACAAATGAGTCAGACACAGTGAAGAGGCTGCAGCTGGAGGTGCCGCATCCTGAATTTAGTTTCCGTGCTGGCCAGTGGGTGGACTTTTTCATCCCAGGAATGGAGAAAGTGGGTGGCTTTTCCGTGTGCTCCAGCCCTGACCTTCTGCACAGAGAACAAGTTATAGAACTGGCAGTGAAATACACACAGCACCCACCTGCACACTGGATACACACCAAGTGTACGTTAGGCTCACAAGTGGAAGTGCGAGTCGGGGGGGATTTTTATTTCGACCCCATGCCATCTGATCATACTGTGGACCTGCTTTTGGTGGCTGGTGGCGTTGGTATCAACCCCCTTTACTCCATCCTAATGCATGCTGTAGATCTTCTCCGACTGCCACACGCATACacaccaggacacacacacctctgttacAGTGCCAAGAACACAAAGGAGTTGCTGTTcaaaaacagCATCACTGGTATTTGTCGGGAATTTCCAGATAAATTCTCTTGCGACTTCCTAGTGACGCGACAAGATTTTGAAATCGAGCCGGGCCTCCAGTCATACACAACCAGTGGAAAAATATCACAGGAGGTGCTGAGGCGTCATGTTAACCCTGGGCGCACATTATGTTATTTGTGTGGGCCGCCACCCATGATTGAGAGTGTGAGTAGAGACCTGCAAAGTCTTGGCCTGTCTATGGACAGAATCCTTTATGAGAAGTGGTGGTAGATCTCCAGCCCTTCAAGTGCCTCTGGGGCTTGAAAAAGGACCATCAgaactgatattttatttttaaattgcacAATTTCATAACTACACAACTGCACAACTTTACTTGTGCAATGCAGTTTCCTCCTCTATAAACAGCAGCTTACTTAATACCATCACAAATTATGCTAAGCTGTTACTCAGCTATGCATTTATGGTCATATGAGGTTATATGAGAAAAAACAGACCTGATTTTTATTCCCtattaaaacagtgtttttgtaCTGGATTTAAATATAGGCACTTCTTTTTGACCTGATAAAAAGAATGTTTGCCCAAATaacattttctgttatttaaacTTTAGCATGCAATTTATTTAGAACAGTAGCTGTATTGAGAGGTAACATGTTTATCGATGTAGTCTTTTATACAAATTGGTAACTGTAACGTGAATCATGATGATAATTGGTCAGTCGGTGGAGATCCtgtatgtgtaaaaaataattttattcttatattAATGAATACagtaatcattatcatgatccTGTTTTAACATGTGAAACCTAagatgttttttcctcttttatagTTTTTCCAAAATTGCTTAAAGATATTTCTGGAA
>XM_026928260.2
ACCGATAACTACTTCCGGTTCACGGCTGTGTTTCCTAAGAGCACGACAGAGGTTAAATAGCCATGCTTTAACACAGTCACTGAAGACTACAAATATACTGAATGCGGATTACGTTGTGAATATATGTTTTCGGGGTTGGTATTATTTTTAGATTACCAGGAGATATTTTTGGATAGTAAAACGTGAGAAATTTAGAAGGCAAAGTAGACTAAGCAGCGCAGCCAATACACATTATCAGGCTGTAGAGAACCTGCCGGTCTGATCCATTAGTTTCCATATGTTTTACTTGCACAGTAACTTCCTAGTGCAAACTCCAGCTCCAGCGCAATGAGCCTGCGGTGTGTTTTAATTACTGCTCGGTGTTTTGCTGGTGCTTCGCGGTCACTACGAGCCACATCTAACCTATTATGTTCATCGAGaaaCATGTCATCACGACAAGCTGATCACCTTGAAAGGACAGCTAGTGTTCACAGACAGAAGgccaCGTTCTCAGCACGAGTTTGTGCCATTACAAATGAGTCAGACACAGTGAAGAGGCTGCAGCTGGAGGTGCCGCATCCTGAATTTAGTTTCCGTGCTGGCCAGTGGGTGGACTTTTTCATCCCAGGAATGGAGAAAGTGGGTGGCTTTTCCGTGTGCTCCAGCCCTGACCTTCTGCACAGAGAACAAGTTATAGAACTGGCAGTGAAATACACACAGCACCCACCTGCACACTGGATACACACCAAGTGTACGTTAGGCTCACAAGTGGAAGTGCGAGTCGGGGGGGATTTTTATTTCGACCCCATGCCATCTGATCATACTGTGGACCTGCTTTTGGTGGCTGGTGGCGTTGGTATCAACCCCCTTTACTCCATCCTAATGCATGCTGTAGATCTTCTCCGACTGCCACACGCATACacaccaggacacacacacctctgttacAGTGCCAAGAACACAAAGGAGTTGCTGTTcaaaaacagCATCACTGGTATTTGTCGGGAATTTCCAGATAAATTCTCTTGCGACTTCCTAGTGACGCGACAAGATTTTGAAATCGAGCCGGGCCTCCAGTCATACACAACCAGTGGAAAAATATCACAGGAGGTGCTGAGGCGTCATGTTAACCCTGGGCGCACATTATGTTATTTGTGTGGGCCGCCACCCATGATTGAGAGTcctaatgatggcctcctccACTTGCATTGATACCTCTTTgcaccgcatattgagagttcccatgaatagctaccaaatgcaaattcaacacttggaatcaactccagaattttcatctccttaatttgtcatgaaataatgaggaaacaagTCACACCTGTCCATGAAACTGCTTAGCAGTCaattgtccagttacttttgagcctgttgaaatggctgtaattcctaaacggttaattcTATTGTTGTTAatccccttgaattaaagctgaaagtctata
>XM_026928261.2
ACCGATAACTACTTCCGGTTCACGGCTGTGTTTCCTAAGAGCACGACAGAGGTTAAATAGCCATGCTTTAACACAGTCACTGAAGACTACAAATATACTGAATGCGGATTACGTTGTGAATATATGTTTTCGGGGTTGGTATTATTTTTAGATTACCAGGAGATATTTTTGGATAGTAAAACGTGAGAAATTTAGAAGGCAAAGTAGACTAAGCAGCGCAGCCAATACACATTATCAGGCTGTAGAGAACCTGCCGGTCTGATCCATTAGTTTCCATATGTTTTACTTGCACAGTAACTTCCTAGTGCAAACTCCAGCTCCAGCGCAATGAGCCTGCGGTGTGTTTTAATTACTGCTCGGTGTTTTGCTGGTGCTTCGCGGTCACTACGAGCCACATCTAACCTATTATGTTCATCGAGaaaCATGTCATCACGACAAGCTGATCACCTTGAAAGGACAGCTAGTGTTCACAGACAGAAGgccaCGTTCTCAGCACGAGTTTGTGCCATTACAAATGAGTCAGACACAGTGAAGAGGCTGCAGCTGGAGGTGCCGCATCCTGAATTTAGTTTCCGTGCTGGCCAGTGGGTGGACTTTTTCATCCCAGGAATGGAGAAAGTGGGTGGCTTTTCCGTGTGCTCCAGCCCTGACCTTCTGCACAGAGAACAAGTTATAGAACTGGCAGTGAAATACACACAGCACCCACCTGCACACTGGATACACACCAAGTGTACGTTAGGCTCACAAGTGGAAGTGCGAGTCGGGGGGGATTTTTATTTCGACCCCATGCCATCTGATCATACTGTGGACCTGCTTTTGGTGGCTGGTGGCGTTGGTATCAACCCCCTTTACTCCATCCTAATGCATGCTGTAGATCTTCTCCGACTGCCACACGCATACacaccaggacacacacacctctgttacAGTGCCAAGAACACAAAGGAGTTGCTGTTcaaaaacagCATCACTGGTATTTGTCGGGAATTTCCAGATAAATTCTCTTGCGACTTCCTAGTGACGCGACAAGATTTTGAAATCGAGCCGGGCCTCCAGTCATACACAACCAGTGGAAAAATATCACAGGAGGTGCTGAGGCGTCATGTTAACCCTGGGCGCACATTATGTTATTTGTGTGGGCCGCCACCCATGATTGAGAGTTGATGGCATCTCAACGTTGCGTGCAAACACAGCTTCTGCACGAAATGGATGGCCGAGCAAAAGGTTCCGCTTGCCAAATCTCTGAGGAAGTGTGGCTGAAGGTGGACTCTCAGTTCGGCGGCACATTGTACACTGCAGACCAGAGATAGGCTTGGTGTTTCCTGAGCGACCAAACCTCTGCGGTAGGTTGATGGAAGTCTTGGGCATCCTTTGCATGTGTGCGGAGTCACGGCCAAAGCGGAGAGGCAGGTTGGCATGAGCATGCGCTGATTTTGCCAAGAGTGGGTGTAGGCGAAGGATGGTAGGCGAGTTTACTCTGCCACTGCTGCTTGGAGCCATGCTCAGTGTGGCGTCCTCCATTTCCAGACTTCGGGGAAGATCTTCATTGCTCTTTAAAGAAGTGAAAAGGGTTACATTTTGCTACAAAACAagcatgttttacatttataactgtaaaaattgtgttttaacAGTGGTATGCCTTAAATTACACTACATGAGACTGCTGTAAAGAACACCACAAATATCATTAAAACACTGTACATTTCA
>XM_026928262.2
tcttggtctcatttttttacatcaccagaaacctggcattttaacagggaaaCATGTCATCACGACAAGCTGATCACCTTGAAAGGACAGCTAGTGTTCACAGACAGAAGgccaCGTTCTCAGCACGAGTTTGTGCCATTACAAATGAGTCAGACACAGTGAAGAGGCTGCAGCTGGAGGTGCCGCATCCTGAATTTAGTTTCCGTGCTGGCCAGTGGGTGGACTTTTTCATCCCAGGAATGGAGAAAGTGGGTGGCTTTTCCGTGTGCTCCAGCCCTGACCTTCTGCACAGAGAACAAGTTATAGAACTGGCAGTGAAATACACACAGCACCCACCTGCACACTGGATACACACCAAGTGTACGTTAGGCTCACAAGTGGAAGTGCGAGTCGGGGGGGATTTTTATTTCGACCCCATGCCATCTGATCATACTGTGGACCTGCTTTTGGTGGCTGGTGGCGTTGGTATCAACCCCCTTTACTCCATCCTAATGCATGCTGTAGATCTTCTCCGACTGCCACACGCATACacaccaggacacacacacctctgttacAGTGCCAAGAACACAAAGGAGTTGCTGTTcaaaaacagCATCACTGGTATTTGTCGGGAATTTCCAGATAAATTCTCTTGCGACTTCCTAGTGACGCGACAAGATTTTGAAATCGAGCCGGGCCTCCAGTCATACACAACCAGTGGAAAAATATCACAGGAGGTGCTGAGGCGTCATGTTAACCCTGGGCGCACATTATGTTATTTGTGTGGGCCGCCACCCATGATTGAGAGTGTGAGTAGAGACCTGCAAAGTCTTGGCCTGTCTATGGACAGAATCCTTTATGAGAAGTGGTGGTAGATCTCCAGCCCTTCAAGTGCCTCTGGGGCTTGAAAAAGGACCATCAgaactgatattttatttttaaattgcacAATTTCATAACTACACAACTGCACAACTTTACTTGTGCAATGCAGTTTCCTCCTCTATAAACAGCAGCTTACTTAATACCATCACAAATTATGCTAAGCTGTTACTCAGCTATGCATTTATGGTCATATGAGGTTATATGAGAAAAAACAGACCTGATTTTTATTCCCtattaaaacagtgtttttgtaCTGGATTTAAATATAGGCACTTCTTTTTGACCTGATAAAAAGAATGTTTGCCCAAATaacattttctgttatttaaacTTTAGCATGCAATTTATTTAGAACAGTAGCTGTATTGAGAGGTAACATGTTTATCGATGTAGTCTTTTATACAAATTGGTAACTGTAACGTGAATCATGATGATAATTGGTCAGTCGGTGGAGATCCtgtatgtgtaaaaaataattttattcttatattAATGAATACagtaatcattatcatgatccTGTTTTAACATGTGAAACCTAagatgttttttcctcttttatagTTTTTCCAAAATTGCTTAAAGATATTTCTGGAA
>XM_034301580.1
atttatcttggtctcatttttttacatcaccagaaacctggcattttaacagggTAACTTCCTAGTGCAAACTCCAGCTCCAGCGCAATGAGCCTGCGGTGTGTTTTAATTACTGCTCGGTGTTTTGCTGGTGCTTCGCGGTCACTACGAGCCACATCTAACCTATTATGTTCATCGAGaaaCATGTCATCACGACAAGCTGATCACCTTGAAAGGACAGCTAGTGTTCACAGACAGAAGgccaCGTTCTCAGCACGAGTTTGTGCCATTACAAATGAGTCAGACACAGTGAAGAGGCTGCAGCTGGAGGTGCCGCATCCTGAATTTAGTTTCCGTGCTGGCCAGTGGGTGGACTTTTTCATCCCAGGAATGGAGAAAGTGGGTGGCTTTTCCGTGTGCTCCAGCCCTGACCTTCTGCACAGAGAACAAGTTATAGAACTGGCAGTGAAATACACACAGCACCCACCTGCACACTGGATACACACCAAGTGTACGTTAGGCTCACAAGTGGAAGTGCGAGTCGGGGGGGATTTTTATTTCGACCCCATGCCATCTGATCATACTGTGGACCTGCTTTTGGTGGCTGGTGGCGTTGGTATCAACCCCCTTTACTCCATCCTAATGCATGCTGTAGATCTTCTCCGACTGCCACACGCATACacaccaggacacacacacctctgttacAGTGCCAAGAACACAAAGGAGTTGCTGTTcaaaaacagCATCACTGGTATTTGTCGGGAATTTCCAGATAAATTCTCTTGCGACTTCCTAGTGACGCGACAAGATTTTGAAATCGAGCCGGGCCTCCAGTCATACACAACCAGTGGAAAAATATCACAGGAGGTGCTGAGGCGTCATGTTAACCCTGGGCGCACATTATGTTATTTGTGTGGGCCGCCACCCATGATTGAGAGTGTGAGTAGAGACCTGCAAAGTCTTGGCCTGTCTATGGACAGAATCCTTTATGAGAAGTGGTGGTAGATCTCCAGCCCTTCAAGTGCCTCTGGGGCTTGAAAAAGGACCATCAgaactgatattttatttttaaattgcacAATTTCATAACTACACAACTGCACAACTTTACTTGTGCAATGCAGTTTCCTCCTCTATAAACAGCAGCTTACTTAATACCATCACAAATTATGCTAAGCTGTTACTCAGCTATGCATTTATGGTCATATGAGGTTATATGAGAAAAAACAGACCTGATTTTTATTCCCtattaaaacagtgtttttgtaCTGGATTTAAATATAGGCACTTCTTTTTGACCTGATAAAAAGAATGTTTGCCCAAATaacattttctgttatttaaacTTTAGCATGCAATTTATTTAGAACAGTAGCTGTATTGAGAGGTAACATGTTTATCGATGTAGTCTTTTATACAAATTGGTAACTGTAACGTGAATCATGATGATAATTGGTCAGTCGGTGGAGATCCtgtatgtgtaaaaaataattttattcttatattAATGAATACagtaatcattatcatgatccTGTTTTAACATGTGAAACCTAagatgttttttcctcttttatagTTTTTCCAAAATTGCTTAAAGATATTTCTGGAA
>XM_034301581.1
ACCGATAACTACTTCCGGTTCACGGCTGTGTTTCCTAAGAGCACGACAGAGGTTAAATAGCCATGCTTTAACACAGTCACTGAAGACTACAAATATACTGAATGCGGATTACGTTGTGAATATATGTTTTCGGGGTTGGTATTATTTTTAGATTACCAGGAGATATTTTTGGATAGTAAAACGTGAGAAATTTAGAAGGCAAAGTAGACTAAGCAGCGCAGCCAATACACATTATCAGGCTGTAGAGAACCTGCCGGTCTGATCCATTAGTTTCCATATGTTTTACTTGCACAGTAACTTCCTAGTGCAAACTCCAGCTCCAGCGCAATGAGCCTGCGGTGTGTTTTAATTACTGCTCGGTGTTTTGCTGGTGCTTCGCGGTCACTACGAGCCACATCTAACCTATTATGTTCATCGAGaaaCATGTCATCACGACAAGCTGATCACCTTGAAAGGACAGCTAGTGTTCACAGACAGAAGgccaCGTTCTCAGCACGAGTTTGTGCCATTACAAATGAGTCAGACACAGTGAAGAGGCTGCAGCTGGAGGTGCCGCATCCTGAATTTAGTTTCCGTGCTGGCCAGTGGGTGGACTTTTTCATCCCAGGAATGGAGAAAGTGGGTGGCTTTTCCGTGTGCTCCAGCCCTGACCTTCTGCACAGAGAACAAGTTATAGAACTGGCAGTGAAATACACACAGCACCCACCTGCACACTGGATACACACCAAGTGTACGTTAGGCTCACAAGTGGAAGTGCGAGTCGGGGGGGATTTTTATTTCGACCCCATGCCATCTGATCATACTGTGGACCTGCTTTTGGTGGCTGGTGGCGTTGGTATCAACCCCCTTTACTCCATCCTAATGCATGCTGTAGATCTTCTCCGACTGCCACACGCATACacaccaggacacacacacctctgttacAGTGCCAAGAACACAAAGGAGTTGCTGTTcaaaaacagCATCACTGGTATTTGTCGGGAATTTCCAGATAAATTCTCTTGCGACTTCCTAGTGACGCGACAAGATTTTGAAATCGAGCCGGGCCTCCAGTCATACACAACCAGTGGAAAAATATCACAGGAGGTGCTGAGGCGTCATGTTAACCCTGGGCGCACATTATGTTATTTGTGTGGGCCGCCACCCATGATTGAGAGTATTCCCCAACACACCCTTACAAGCCTGGGTACAAGGTCCTGGTGAAAAGGCTGAACCCAA

Function

symbol description
oxnad1 Predicted to enable oxidoreductase activity. Orthologous to human OXNAD1 (oxidoreductase NAD binding domain containing 1).

NR:

description
LOW QUALITY PROTEIN: oxidoreductase NAD-binding domain-containing protein 1-like

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016491 oxidoreductase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026928259.2 False 1684 mRNA 0.42 8 13976922 13999677
XM_026928260.2 False 1442 mRNA 0.45 8 13974676 13999667
XM_026928261.2 True 1710 mRNA 0.47 8 13969596 13999667
XM_026928262.2 False 1464 mRNA 0.42 7 13976922 14000660
XM_034301580.1 False 1594 mRNA 0.42 8 13976922 14000665
XM_034301581.1 False 1221 mRNA 0.47 8 13925835 13999667

Neighbor

gene id symbol gene type direction distance location
LOC113535216 LOC108272677,LOC108433755,LOC107727734,LOC103040142,LOC107754022,LOC107549876,LOC107563022,LOC107666341,LOC107665170 coding downstream 121247 13782962 ~ 13804588 (-)
pbxip1a LOC108273227 coding downstream 154302 13761655 ~ 13771533 (-)
s100u LOC108272971,LOC108433761 coding downstream 167407 13752813 ~ 13758428 (-)
s100s s100s,LOC108272970,LOC108433762,LOC103039105,LOC107716593,LOC107670010,LOC107559723 coding downstream 175333 13746878 ~ 13750502 (-)
pygo2 LOC108273220,LOC108433763,LOC103036475,LOC107693316,LOC107729895 coding downstream 191074 13729127 ~ 13734761 (-)
igf2bp3 igf2bp3,LOC108273237,LOC107748676,LOC107592016 coding upstream 16023 14016688 ~ 14046043 (-)
ccdc126 ccdc126 coding upstream 66652 14067317 ~ 14074175 (-)
mpp6b mpp6,LOC108272353,LOC107592011 coding upstream 139279 14139944 ~ 14168596 (-)
dazl dazl coding upstream 172169 14172834 ~ 14195466 (-)
tbc1d5 tbc1d5,LOC107592018,LOC107739565,LOC107748680 coding upstream 195290 14195955 ~ 14218170 (-)
G405420 NA non-coding downstream 53407 13815898 ~ 13872428 (-)
G405419 NA non-coding downstream 110943 13808483 ~ 13814892 (-)
G405386 NA non-coding downstream 190087 13735536 ~ 13735748 (-)
G405368 NA non-coding downstream 219293 13655405 ~ 13706542 (-)
G405353 NA non-coding downstream 319943 13601027 ~ 13605892 (-)
G405575 NA non-coding upstream 75777 14076442 ~ 14077150 (-)
LOC117596429 NA non-coding upstream 182821 14183486 ~ 14191755 (-)
G405681 NA non-coding upstream 255859 14256524 ~ 14329200 (-)
G405701 NA non-coding upstream 313074 14313739 ~ 14314834 (-)
G405707 NA non-coding upstream 378227 14378892 ~ 14385650 (-)
s100a11 s10ab,LOC105901467,LOC102790362,LOC105028986,LOC106570111 other downstream 164278 13759761 ~ 13761557 (-)
cks1b cks1b,LOC108433716,LOC107753514,LOC106570108 other downstream 367204 13556156 ~ 13558631 (-)
rps27.1 rps27.2,LOC107589412,LOC106605923,LOC108429942,LOC107582081,LOC107699547 other downstream 381330 13542003 ~ 13544505 (-)
dpm3 dpm3,LOC107693280,LOC107678800 other downstream 533002 13389916 ~ 13392833 (-)
G404999 NA other downstream 784720 13140694 ~ 13141115 (-)
npy npy other upstream 80707 14081372 ~ 14083846 (-)
G405588 NA other upstream 113954 14114619 ~ 14119658 (-)
tpbga LOC108272337 other upstream 474811 14475476 ~ 14479077 (-)
G405961 NA other upstream 966811 14967476 ~ 15013988 (-)

Expression


Co-expression Network