npy (npy)


Basic Information

Item Value
gene id npy
gene name npy
gene type misc
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047623.1
NCBI id CM018569.1
chromosome length 15305753
location 14081372 ~ 14083846 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026928309.2
GCGCGTACCGATGGAGCGCGTCCTCGTCCTTGCACGCGCCACTCTACTATATAAACCCAGCACAAACACCATCAGCCCCACGAGACACGACTCCCAGCATCACAGCCTCCCAGCATCACAGACTCCCAGCATCACAGACTCCCAGCCTCCCAGCATCACAGCGCTGAGCTCTACGGGAGAAGACAACAGAACATCAACTAACTATGCGTCCTCGTGCAAACGTGTGTGTCGGCTGGGCCGCGTGCATCCTGCTTGTTGTGTGTTTGAGCGCGATGGCGGAAGGATATCCAACAAAGCCGCAGAACCCAGGAGAGGACGCACCTGTGGAGGAACTAGCCAAGTATTACTCCGCGTTGAGACACTACATCAACCTCATCACAAGGCAGAGGTATGGGAAAAGGTCAAACTCTGACGCATTAACCCCAGACCTGCTGTTTGGAGAGGCAGAGATGCGACTGCAGTCCAGATATGGTGACCCTTTGATGTGGTGATGTCAGTGTAGACAAATATGTCAACATTTCCATGACTGTTAGCGGCAGTAACCTCTTACATCATTAAAAATGGCTACTTCCATGATTCCATCGCACTGAAATTTAGTGATATGTAGTCCATTTTTAGCAAGCATCAGGGTACACCAAACTTGTTAGTTTGGTCTGTTTAGGACATTGCTGTAATTGCATTGTTTCATTGTTTCTACATCTTGCTTATGAGATCATAAATCATCACTGATTTGCATGTAATCCCCAGCATCCCCTATGTGTATATAGATGTCCtgtatttatgtttgttatatGCACTGTAGCTGCaccaataaagaaaaaacattactgaCT
>XR_004577571.1
GCGCGTACCGATGGAGCGCGTCCTCGTCCTTGCACGCGCCACTCTACTATATAAACCCAGCACAAACACCATCAGCCCCACGAGACACGACTCCCAGCATCACAGCCTCCCAGCATCACAGACTCCCAGCATCACAGACTCCCAGCCTCCCAGCATCACAGCGCTGAGCTCTACGGGAGAAGACAACAGAACATCAACTAACTATGCGTCCTCGTGCAAACGTGTGTGTCGGCTGGGCCGCGTGCATCCTGCTTGTTGTGTGTTTGAGCGCGATGGCGGAAGGATATCCAACAAAGCCGCAGAACCCAGGAGAGGACGCACCTGTGGAGGAACTAGCCAAGTATTACTCCGCGTTGAGACACTACATCAACCTCATCACAAGGCAGAGGTATGGGAAAAGGTCAAACTCTGACGCATTAACCCCAGACCTGCTGTTTGGAGAGGCAGAGATGCGACTGCAGTCCAGGTAAAATGTCGAAACCTACTCCTGACCTGGTGACATACTTCTTATGGATTTGcaaataatATATGGTGACCCTTTGATGTGGTGATGTCAGTGTAGACAAATATGTCAACATTTCCATGACTGTTAGCGGCAGTAACCTCTTACATCATTAAAAATGGCTACTTCCATGATTCCATCGCACTGAAATTTAGTGATATGTAGTCCATTTTTAGCAAGCATCAGGGTACACCAAACTTGTTAGTTTGGTCTGTTTAGGACATTGCTGTAATTGCATTGTTTCATTGTTTCTACATCTTGCTTATGAGATCATAAATCATCACTGATTTGCATGTAATCCCCAGCATCCCCTATGTGTATATAGATGTCCtgtatttatgtttgttatatGCACTGTAGCTGCaccaataaagaaaaaacattactgaCT

Function

symbol description
npy Enables type 2 neuropeptide Y receptor binding activity. Acts upstream of or within negative regulation of adenylate cyclase-activating adrenergic receptor signaling pathway; positive regulation of circadian sleep/wake cycle, sleep; and positive regulation of feeding behavior. Predicted to be located in extracellular region. Predicted to be active in extracellular space. Is expressed in several structures, including brain; digestive system; eye; immune system; and male organism. Human ortholog(s) of this gene implicated in several diseases, including Huntington's disease; alcohol use disorder; artery disease (multiple); epilepsy (multiple); and type 2 diabetes mellitus. Orthologous to human NPY (neuropeptide Y).

NR:

description
PREDICTED: pro-neuropeptide Y

GO:

id name namespace
GO:0007218 neuropeptide signaling pathway biological_process
GO:0005576 extracellular region cellular_component
GO:0031843 type 2 neuropeptide Y receptor binding molecular_function
GO:0005179 hormone activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026928309.2 False 833 mRNA 0.47 4 14081372 14083846
XR_004577571.1 True 893 misc_RNA 0.47 4 14081372 14083846

Neighbor

gene id symbol gene type direction distance location
ccdc126 ccdc126 coding downstream 7197 14067317 ~ 14074175 (-)
igf2bp3 igf2bp3,LOC108273237,LOC107748676,LOC107592016 coding downstream 35329 14016688 ~ 14046043 (-)
oxnad1 oxnad1 coding downstream 80707 13925835 ~ 14000665 (-)
LOC113535216 LOC108272677,LOC108433755,LOC107727734,LOC103040142,LOC107754022,LOC107549876,LOC107563022,LOC107666341,LOC107665170 coding downstream 276784 13782962 ~ 13804588 (-)
pbxip1a LOC108273227 coding downstream 309839 13761655 ~ 13771533 (-)
mpp6b mpp6,LOC108272353,LOC107592011 coding upstream 56098 14139944 ~ 14168596 (-)
dazl dazl coding upstream 88988 14172834 ~ 14195466 (-)
tbc1d5 tbc1d5,LOC107592018,LOC107739565,LOC107748680 coding upstream 112109 14195955 ~ 14218170 (-)
arid1ab LOC108272722,LOC108415569 coding upstream 237019 14320865 ~ 14388466 (-)
nudc nudc,LOC107689540,LOC107700719 coding upstream 356954 14440800 ~ 14452371 (-)
G405575 NA non-coding downstream 4222 14076442 ~ 14077150 (-)
G405420 NA non-coding downstream 208944 13815898 ~ 13872428 (-)
G405419 NA non-coding downstream 266480 13808483 ~ 13814892 (-)
G405386 NA non-coding downstream 345624 13735536 ~ 13735748 (-)
G405368 NA non-coding downstream 374830 13655405 ~ 13706542 (-)
LOC117596429 NA non-coding upstream 99640 14183486 ~ 14191755 (-)
G405681 NA non-coding upstream 172678 14256524 ~ 14329200 (-)
G405701 NA non-coding upstream 229893 14313739 ~ 14314834 (-)
G405707 NA non-coding upstream 295046 14378892 ~ 14385650 (-)
G405900 NA non-coding upstream 534803 14618649 ~ 14686310 (-)
s100a11 s10ab,LOC105901467,LOC102790362,LOC105028986,LOC106570111 other downstream 319815 13759761 ~ 13761557 (-)
cks1b cks1b,LOC108433716,LOC107753514,LOC106570108 other downstream 522741 13556156 ~ 13558631 (-)
rps27.1 rps27.2,LOC107589412,LOC106605923,LOC108429942,LOC107582081,LOC107699547 other downstream 536867 13542003 ~ 13544505 (-)
dpm3 dpm3,LOC107693280,LOC107678800 other downstream 688539 13389916 ~ 13392833 (-)
G404999 NA other downstream 940257 13140694 ~ 13141115 (-)
G405588 NA other upstream 30773 14114619 ~ 14119658 (-)
tpbga LOC108272337 other upstream 391630 14475476 ~ 14479077 (-)
G405961 NA other upstream 883630 14967476 ~ 15013988 (-)

Expression


Co-expression Network