ccdc126 (ccdc126)


Basic Information

Item Value
gene id ccdc126
gene name ccdc126
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047623.1
NCBI id CM018569.1
chromosome length 15305753
location 14067317 ~ 14074175 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026928422.2
TGTGAAACTTTTTGCCACATAGCCGCTGAAGGCACCTCTGTTCCTGTGTGGCTTCCCAGCGAGCATAAAGTCCTGGAGACAGCGCTGCTGCTCCTGTGCGCTGAGCTGGGCGGCTGGATCACGgtgcagTATTGGATATGGTGACTGTGGaggccactgaagtacactgaactcaccACTGTGTTCATGGAACCAGATTGAGACGACTTGCGCTTTGTAACgtggggcattatcatgctggaagtagccattataatgtggtaaattgtggccatgaagagaTGTActtggtcagcaacaataccgATTGGATAATTGTGTGAatgaacaggtgttcctaataaagtgtctgGCAATTTGTCAAATGGATCAGGCTGAGTATGAGATCCCAGGGCTGATCGACATACCGGAGGTTGGGAGTGGTTCAAACTCTTCCAGCTGCCATTCAGTCTAGTCCCCATCCAGATGCCCTGATATTTCCCTGCTGGATTCAGCAGTGGTCACATTTAGATCTATTTTGGATATCTTTATTACCATCTGTAGTCATGCCCTGATCTACAGCCATTTCCCTCATCTTTATGTCCTgcttttctgattctgatttttgcCGATCATCCCACTAATCCTGAACTCCAACTTGGAGCTCCAGTCCAGACAACACATTTACAGGCTTATCTTTAATTCTGTCATCTCAGTCCATTCCACTGGCCTTGGTGGTGGTAGCCAACGTAGCTGCTGGGCTACAGCAATGCTCGGCTGTCTGCTGCGAGGTAGGAGCATGTCTCAGAGGCTCAGCGTTTTGCTCCTGCTCTTTGGCCTGGCCTGGTGCCTGCTGCTGTTGCATTACACCTTTACACAGCCACGGCACCAAAGCAGCACCGAACTCCGCCAACAGATCCTGGAGCTGAGCCAGCGCTATGTCAAAGCTCTCAGCGCAGAGAACCATGAACTTGCAAGGCCATACAACCCCTCAATGGCTGGATATGCTGATCTGAAAAGGACCATTGCCGTGCTATTGGATGACATCTTGGACCGTTTGGTGAAGCTGGAGAATAGGCTGGATGCTACAGTGAACACATCAGTTCACAGCCCTTCTCACATGACAGGGACTGTCATGCACAGATCCACTAAACAGAACGAATCAGGCACAAACGCTCACAGCAATCAGCTGCCGCCCCAACCACTGACGTAATCTGGGAGCTAGTGGCTGATGGGTGGCACCATTGACACTGTGGTTGCACCATGACTCCAAGACtgatatattttgtgtgtgcgtgtgcgtgtgtgtgtgtgtgtgtgtatatacatataaatatttctattagggatgtaaccaagtATCAATACTTTATTCGGATTGAACTGAAAATGTGTCCTAAATGAAATACAGATCCAAATAGTAGGcagagtattttttttgtttgtttgtttgtttttgttttgtttttaagaaagctGGCCAAATTGCTTTAGACTAGGTGTATGCATTTGGACGGTGACTGGCCCAGAATGTTCAGGCATCGGAAAAGTTAGacacttttcatttctttttctcagtcttttcacAGGAAGCAAGTTAACAGTGCATTTCTGATTTGAAATACACAGCCATTATACAAGGGACCTGACAACCCTAGAACCCTAGAAATGACCTAGAAGTTCATTTACGTGACACTGAATAGTGGAGCTTCTATTATATTTTACCCAACTCCAAACTGGAAAtaaatttgataaaatattattagatggctattattgttaaatgtaaataacagtttcaTGATTTGGGAAAGAGGTCACTGCTTTGAAACAGCTTGCTTACTCAGCCACATTAGATAAAAGATAGAAACTCATTAGAAAGCTTCTACAGGGTGCGTAATgcaggagttgaataaagttatgttctgcaaattgctatttgttagaatttgtgaatgaaaaatgaattctttttccagcagccctgtattttcagtgtttccagggCTTTGTGATAGggttaacataaaaaaaaccttttattttaatgctctTATGCATTGCAATGCTGACGCATGATTGGTTTATTGGATAATTGCACGAATGAGTAGGGGCACAgttattcctattaaagtggtcggtgagtgtgtatatgatgtTGGAATAAGCAAATGTTGTTGCATAGAAGAGGAAAAATCTTTCCAGGATAGTCCAGATCAGTCAATCAGCAGAACTGTGTAAAAGGATTGCTTTACAATAGCTGCATCATtgcatgttattgttaataGAATTTGTGCacttatattcttatattcacTTATATTCAGCAAGAAAAGCACATGCGCAAATCAAGCAAATTTTATATGTTGGATTAATGAAGTCCTGATGCACATGTGAGACAACAGTGTTCACTGGGAACTAGTTcacttttataatataaaactgaGTCCATTTTGGCAGAAAAATATGTAGCAGGGTATAGACATAGTTTGTGGTTAGACTTACTAAATCTTTAATTAATCCTATTCATGAATTGCCAAAACTAGGCCACAAATGCCTCCCCTCTGTAATTGTGGGACCAAATATTGACAGGTCCTGCTTGGAGCTTTAGGGTTTCTCAGTGCTGAAGCACTCCTCATGCCATGTTGGCTGTCGGTGTAATAAAACAAGTGCCAATATCAGTCATA
>XM_034301712.1
TGTGAAACTTTTTGCCACATAGCCGCTGAAGGCACCTCTGTTCCTGTGTGGCTTCCCAGCGAGCATAAAGTCCTGGAGACAGCGCTGCTGCTCCTGTGCGCTGAGCTGGGCGGCTGGATCACGgtgcagTATTGGATATGGTGACTGTGGaggccactgaagtacactgaactcaccACTGTGTTCATGGAACCAGATTGAGACGACTTGCGCTTTGTAACgtggggcattatcatgctggaagtagccattataatgtggtaaattgtggccatgaagagaTGTActtggtcagcaacaataccgATTGGATAATTGTGTGAatgaacaggtgttcctaataaagtgtctgttaaaggggtccctggctgcaaaaattTTGAGAACTCCTGTTACAGATGATGCAGCAAGCCTCAGTAGTCACTAATAAGACATCAACTCCTAAGTGGCAATTTGTCAAATGGATCAGGCTGAGTATGAGATCCCAGGGCTGATCGACATACCGGAGGTTGGGAGTGGTTCAAACTCTTCCAGCTGCCATTCAGTCTAGTCCCCATCCAGATGCCCTGATATTTCCCTGCTGGATTCAGCAGTGGTCACATTTAGATCTATTTTGGATATCTTTATTACCATCTGTAGTCATGCCCTGATCTACAGCCATTTCCCTCATCTTTATGTCCTgcttttctgattctgatttttgcCGATCATCCCACTAATCCTGAACTCCAACTTGGAGCTCCAGTCCAGACAACACATTTACAGGCTTATCTTTAATTCTGTCATCTCAGTCCATTCCACTGGCCTTGGTGGTGGTAGCCAACGTAGCTGCTGGGCTACAGCAATGCTCGGCTGTCTGCTGCGAGGTAGGAGCATGTCTCAGAGGCTCAGCGTTTTGCTCCTGCTCTTTGGCCTGGCCTGGTGCCTGCTGCTGTTGCATTACACCTTTACACAGCCACGGCACCAAAGCAGCACCGAACTCCGCCAACAGATCCTGGAGCTGAGCCAGCGCTATGTCAAAGCTCTCAGCGCAGAGAACCATGAACTTGCAAGGCCATACAACCCCTCAATGGCTGGATATGCTGATCTGAAAAGGACCATTGCCGTGCTATTGGATGACATCTTGGACCGTTTGGTGAAGCTGGAGAATAGGCTGGATGCTACAGTGAACACATCAGTTCACAGCCCTTCTCACATGACAGGGACTGTCATGCACAGATCCACTAAACAGAACGAATCAGGCACAAACGCTCACAGCAATCAGCTGCCGCCCCAACCACTGACGTAATCTGGGAGCTAGTGGCTGATGGGTGGCACCATTGACACTGTGGTTGCACCATGACTCCAAGACtgatatattttgtgtgtgcgtgtgcgtgtgtgtgtgtgtgtgtgtatatacatataaatatttctattagggatgtaaccaagtATCAATACTTTATTCGGATTGAACTGAAAATGTGTCCTAAATGAAATACAGATCCAAATAGTAGGcagagtattttttttgtttgtttgtttgtttttgttttgtttttaagaaagctGGCCAAATTGCTTTAGACTAGGTGTATGCATTTGGACGGTGACTGGCCCAGAATGTTCAGGCATCGGAAAAGTTAGacacttttcatttctttttctcagtcttttcacAGGAAGCAAGTTAACAGTGCATTTCTGATTTGAAATACACAGCCATTATACAAGGGACCTGACAACCCTAGAACCCTAGAAATGACCTAGAAGTTCATTTACGTGACACTGAATAGTGGAGCTTCTATTATATTTTACCCAACTCCAAACTGGAAAtaaatttgataaaatattattagatggctattattgttaaatgtaaataacagtttcaTGATTTGGGAAAGAGGTCACTGCTTTGAAACAGCTTGCTTACTCAGCCACATTAGATAAAAGATAGAAACTCATTAGAAAGCTTCTACAGGGTGCGTAATgcaggagttgaataaagttatgttctgcaaattgctatttgttagaatttgtgaatgaaaaatgaattctttttccagcagccctgtattttcagtgtttccagggCTTTGTGATAGggttaacataaaaaaaaccttttattttaatgctctTATGCATTGCAATGCTGACGCATGATTGGTTTATTGGATAATTGCACGAATGAGTAGGGGCACAgttattcctattaaagtggtcggtgagtgtgtatatgatgtTGGAATAAGCAAATGTTGTTGCATAGAAGAGGAAAAATCTTTCCAGGATAGTCCAGATCAGTCAATCAGCAGAACTGTGTAAAAGGATTGCTTTACAATAGCTGCATCATtgcatgttattgttaataGAATTTGTGCacttatattcttatattcacTTATATTCAGCAAGAAAAGCACATGCGCAAATCAAGCAAATTTTATATGTTGGATTAATGAAGTCCTGATGCACATGTGAGACAACAGTGTTCACTGGGAACTAGTTcacttttataatataaaactgaGTCCATTTTGGCAGAAAAATATGTAGCAGGGTATAGACATAGTTTGTGGTTAGACTTACTAAATCTTTAATTAATCCTATTCATGAATTGCCAAAACTAGGCCACAAATGCCTCCCCTCTGTAATTGTGGGACCAAATATTGACAGGTCCTGCTTGGAGCTTTAGGGTTTCTCAGTGCTGAAGCACTCCTCATGCCATGTTGGCTGTCGGTGTAATAAAACAAGTGCCAATATCAGTCATA
>XM_034301713.1
CACCTCTGTTCCTGTGTGGCTTCCCAGCGAGCATAAAGTCCTGGAGACAGCGCTGCTGCTCCTGTGCGCTGAGCTGGGCGGCTGGATCACGaggtggaaatcacaacccagcAATACCAGTAATCATGAGTACACTCATGCCATATTAATTAggaactatactatactaatactgggtagggccccCTTAGCTCTCAGAACAGCAacaattcttcgtggcatggattctacaaggtgcagTATTGGATATGGTGACTGTGGaggccactgaagtacactgaactcaccACTGTGTTCATGGAACCAGATTGAGACGACTTGCGCTTTGTAACgtggggcattatcatgctggaagtagccattataatgtggtaaattgtggccatgaagagaTGTActtggtcagcaacaataccgATTGGATAATTGTGTGAatgaacaggtgttcctaataaagtgtctgGCAATTTGTCAAATGGATCAGGCTGAGTATGAGATCCCAGGGCTGATCGACATACCGGAGGTTGGGAGTGGTTCAAACTCTTCCAGCTGCCATTCAGTCTAGTCCCCATCCAGATGCCCTGATATTTCCCTGCTGGATTCAGCAGTGGTCACATTTAGATCTATTTTGGATATCTTTATTACCATCTGTAGTCATGCCCTGATCTACAGCCATTTCCCTCATCTTTATGTCCTgcttttctgattctgatttttgcCGATCATCCCACTAATCCTGAACTCCAACTTGGAGCTCCAGTCCAGACAACACATTTACAGGCTTATCTTTAATTCTGTCATCTCAGTCCATTCCACTGGCCTTGGTGGTGGTAGCCAACGTAGCTGCTGGGCTACAGCAATGCTCGGCTGTCTGCTGCGAGGTAGGAGCATGTCTCAGAGGCTCAGCGTTTTGCTCCTGCTCTTTGGCCTGGCCTGGTGCCTGCTGCTGTTGCATTACACCTTTACACAGCCACGGCACCAAAGCAGCACCGAACTCCGCCAACAGATCCTGGAGCTGAGCCAGCGCTATGTCAAAGCTCTCAGCGCAGAGAACCATGAACTTGCAAGGCCATACAACCCCTCAATGGCTGGATATGCTGATCTGAAAAGGACCATTGCCGTGCTATTGGATGACATCTTGGACCGTTTGGTGAAGCTGGAGAATAGGCTGGATGCTACAGTGAACACATCAGTTCACAGCCCTTCTCACATGACAGGGACTGTCATGCACAGATCCACTAAACAGAACGAATCAGGCACAAACGCTCACAGCAATCAGCTGCCGCCCCAACCACTGACGTAATCTGGGAGCTAGTGGCTGATGGGTGGCACCATTGACACTGTGGTTGCACCATGACTCCAAGACtgatatattttgtgtgtgcgtgtgcgtgtgtgtgtgtgtgtgtgtatatacatataaatatttctattagggatgtaaccaagtATCAATACTTTATTCGGATTGAACTGAAAATGTGTCCTAAATGAAATACAGATCCAAATAGTAGGcagagtattttttttgtttgtttgtttgtttttgttttgtttttaagaaagctGGCCAAATTGCTTTAGACTAGGTGTATGCATTTGGACGGTGACTGGCCCAGAATGTTCAGGCATCGGAAAAGTTAGacacttttcatttctttttctcagtcttttcacAGGAAGCAAGTTAACAGTGCATTTCTGATTTGAAATACACAGCCATTATACAAGGGACCTGACAACCCTAGAACCCTAGAAATGACCTAGAAGTTCATTTACGTGACACTGAATAGTGGAGCTTCTATTATATTTTACCCAACTCCAAACTGGAAAtaaatttgataaaatattattagatggctattattgttaaatgtaaataacagtttcaTGATTTGGGAAAGAGGTCACTGCTTTGAAACAGCTTGCTTACTCAGCCACATTAGATAAAAGATAGAAACTCATTAGAAAGCTTCTACAGGGTGCGTAATgcaggagttgaataaagttatgttctgcaaattgctatttgttagaatttgtgaatgaaaaatgaattctttttccagcagccctgtattttcagtgtttccagggCTTTGTGATAGggttaacataaaaaaaaccttttattttaatgctctTATGCATTGCAATGCTGACGCATGATTGGTTTATTGGATAATTGCACGAATGAGTAGGGGCACAgttattcctattaaagtggtcggtgagtgtgtatatgatgtTGGAATAAGCAAATGTTGTTGCATAGAAGAGGAAAAATCTTTCCAGGATAGTCCAGATCAGTCAATCAGCAGAACTGTGTAAAAGGATTGCTTTACAATAGCTGCATCATtgcatgttattgttaataGAATTTGTGCacttatattcttatattcacTTATATTCAGCAAGAAAAGCACATGCGCAAATCAAGCAAATTTTATATGTTGGATTAATGAAGTCCTGATGCACATGTGAGACAACAGTGTTCACTGGGAACTAGTTcacttttataatataaaactgaGTCCATTTTGGCAGAAAAATATGTAGCAGGGTATAGACATAGTTTGTGGTTAGACTTACTAAATCTTTAATTAATCCTATTCATGAATTGCCAAAACTAGGCCACAAATGCCTCCCCTCTGTAATTGTGGGACCAAATATTGACAGGTCCTGCTTGGAGCTTTAGGGTTTCTCAGTGCTGAAGCACTCCTCATGCCATGTTGGCTGTCGGTGTAATAAAACAAGTGCCAATATCAGTCATA

Function

symbol description
ccdc126 Acts upstream of or within camera-type eye development. Predicted to be located in extracellular region. Orthologous to human CCDC126 (coiled-coil domain containing 126).

NR:

description
PREDICTED: coiled-coil domain-containing protein 126

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026928422.2 False 2666 mRNA 0.42 4 14067317 14074175
XM_034301712.1 False 2762 mRNA 0.42 5 14067317 14074175
XM_034301713.1 True 2777 mRNA 0.42 5 14067317 14074143

Neighbor

gene id symbol gene type direction distance location
igf2bp3 igf2bp3,LOC108273237,LOC107748676,LOC107592016 coding downstream 21274 14016688 ~ 14046043 (-)
oxnad1 oxnad1 coding downstream 66652 13925835 ~ 14000665 (-)
LOC113535216 LOC108272677,LOC108433755,LOC107727734,LOC103040142,LOC107754022,LOC107549876,LOC107563022,LOC107666341,LOC107665170 coding downstream 262729 13782962 ~ 13804588 (-)
pbxip1a LOC108273227 coding downstream 295784 13761655 ~ 13771533 (-)
s100u LOC108272971,LOC108433761 coding downstream 308889 13752813 ~ 13758428 (-)
mpp6b mpp6,LOC108272353,LOC107592011 coding upstream 65769 14139944 ~ 14168596 (-)
dazl dazl coding upstream 98659 14172834 ~ 14195466 (-)
tbc1d5 tbc1d5,LOC107592018,LOC107739565,LOC107748680 coding upstream 121780 14195955 ~ 14218170 (-)
arid1ab LOC108272722,LOC108415569 coding upstream 246690 14320865 ~ 14388466 (-)
nudc nudc,LOC107689540,LOC107700719 coding upstream 366625 14440800 ~ 14452371 (-)
G405420 NA non-coding downstream 194889 13815898 ~ 13872428 (-)
G405419 NA non-coding downstream 252425 13808483 ~ 13814892 (-)
G405386 NA non-coding downstream 331569 13735536 ~ 13735748 (-)
G405368 NA non-coding downstream 360775 13655405 ~ 13706542 (-)
G405353 NA non-coding downstream 461425 13601027 ~ 13605892 (-)
G405575 NA non-coding upstream 2267 14076442 ~ 14077150 (-)
LOC117596429 NA non-coding upstream 109311 14183486 ~ 14191755 (-)
G405681 NA non-coding upstream 182349 14256524 ~ 14329200 (-)
G405701 NA non-coding upstream 239564 14313739 ~ 14314834 (-)
G405707 NA non-coding upstream 304717 14378892 ~ 14385650 (-)
s100a11 s10ab,LOC105901467,LOC102790362,LOC105028986,LOC106570111 other downstream 305760 13759761 ~ 13761557 (-)
cks1b cks1b,LOC108433716,LOC107753514,LOC106570108 other downstream 508686 13556156 ~ 13558631 (-)
rps27.1 rps27.2,LOC107589412,LOC106605923,LOC108429942,LOC107582081,LOC107699547 other downstream 522812 13542003 ~ 13544505 (-)
dpm3 dpm3,LOC107693280,LOC107678800 other downstream 674484 13389916 ~ 13392833 (-)
G404999 NA other downstream 926202 13140694 ~ 13141115 (-)
npy npy other upstream 7197 14081372 ~ 14083846 (-)
G405588 NA other upstream 40444 14114619 ~ 14119658 (-)
tpbga LOC108272337 other upstream 401301 14475476 ~ 14479077 (-)
G405961 NA other upstream 893301 14967476 ~ 15013988 (-)

Expression


Co-expression Network