skiv2l (skiv2l,LOC107754802,LOC107677455,LOC107711323,LOC107694354)


Basic Information

Item Value
gene id skiv2l
gene name skiv2l,LOC107754802,LOC107677455,LOC107711323,LOC107694354
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047623.1
NCBI id CM018569.1
chromosome length 15305753
location 6150852 ~ 6171006 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026942254.2
ggGGAACCAAAAAGTTCTGTGTTTGCTTTGGTGCATGAAATGATGAACTCTCTTTCATGTTTTAACTCTTAATTcaaaactttgtaaaaaaaaaaaaaaagtcctatcTTCGAAGTCCACGAACTTCCGGGgcgtcacttcctgttcacGCGTCGCTTGTTTTCTGCAACTTCAGTGACTGAAATAAGAGAGCAGCAGTTTGGGATGGAGAAGATAAatttgcCAGCCCCTGGCCCTGATGATCTGCCTCTGTCCCTGCTGGAGATGGGCTGTTCAGGGAAGTTTGAGCTCCTCACACACCCACAGCCTGGTCACACACCCTTCCCACCACAGAGCACGcttCCTCATGGGCTTCCTCCATTCAGTCTGGACCTGAAGATGGAGGTAGAGAAACGTTTCCTGCAGGATCCCGCATGGATGCCCATACACGATACCACAGACGCCTTCCAGAAGTTTCTTAAACTGACTAAAAGGGACAGACAAGTGGATTCGTTGTTGCACTGTTCGCTGTCTCCTCTGCACTCGGGTCTGTCTGTAGTGAGAGATCCCACCACCGGCATGCTGCTGGATTTTACagagGTGTTGCTGGAGCACACTGGCTTGTCAGCAAAGAACTCTTTATCAATGCAGCGGCAGCCTGGACCTCCATCTGAGAGCCTGAGAGGCAGCAACACCAACTACCCCTTCCTACCAGGTGGTATGGAGGAGCTGACGTTAGAGCAGATAAAGAAAAAGTCCGAGTTGGAGGAGGACATTGACTTTGAGAATGATTTACTGACGGTGCCTCCGGGGCTAAAAGCTGGCATGAACTTCAGTAACAAAGAAGCTAACACTACAAAAGGAGACGTGAACCTGCTGTCCCTGCTGTCTACGTTTGATGATATAATTGAACCTGTGcctgaggagaaagagagaagctcAGGAAGTGGAGAGGAGTCCAAACTCCACAGAACTAACAGCCTTGAGGATCTGGGCATTAAGGACACACTGCCATCTCCTGCTCCCGCTGGAGCTTCATCACCGAGCAAGACAGATGGAGGAATACAGAAAatcagagaagaaaagaaggaaaggaagtgGGCTATGCCTGTGGACATCACCTCTCCGTGTGAGGATTTCTACAAACGAATCCCCAATCCTGCTTTTAAGtaCCCGTTTGAGCTGGACGTGTTTCAGAAGCAGGCTATCCTCAGGCTTGAGGCTCACGACTCGGTCTTTGTGGCTGCTCACACCTCGGCGGGCAAGACTGTGGTGGCTGAGTACGCCATAGCGCTCTCGCAAAAACACatgaccagAACCATCTACACGTCCCCCATTAAAgctctgtccaatcagaaatTCCGCGACTTTAAGAACACATTTGGTGATGTTGGGCTTTTGACTGGAGATGTTCAGCTAAACCCTGAGGCCTCCTGTCTCATCATGACCACTGAAATATTGAGgtctaTGCTGTATAACGGCTCAGAGGTCATTCGGGACCTGGAGTGGGTTATATTCGACGAGGTTCATTACATCAACGATGCCGAGcGGGGTGTTGTGTGGGAGGAAGTGCTCATCATGCTGCCTGAACATGTTAGCATTATTTTGCTCAGTGCTACAGTGCCCAATGCAGTGGAGTTTAGCGAATGGATCGGgCGTATAAAGAAGAGGCCGATCTACGTGATCAGTACAGTGAAGAGACCGGTGCCACTGGAGCACTACCTCTACACAGGAAACAGCACCAAGACTCAGAAAGAGCTCTTCCTCCTGCTGGATGCTACCGGAGGTTTCCTCACCAAAGGGTACTACGCCGCTGTGGAGGCCAAAAAGGAGCGCACCAGTAAACATGCCCAGTCTTTTGGTACGAAGAAGGTGTCACAGAGCACCACACCAAGTCAGgaccGGGCTGTGTGGCAGACGCTGCTCAACTTCCTGTCAGAGAGGCAGCAGACTCCGGTGGTGGCGTTCACCTTCTCACGCACACGCTGTGATGAAAACGCTCGCTCGCTCACCTCTCTGGACCTGACCACCTCAGTGGAGAAGAACGAGATCCACTCCTTCTTCCAAAAGAGTCTGAGCAGGCTGAGAGGAGGAGACCGTCAACTCCCTCAGATCCTGCTGATGAGGGACTTGCTGAAGAGAGGCATTGCCGTGCACCACAGCGGCATCCTGCCGATCCTGAAGGAGGTCATCGAAATGCTTTTCTCTAGAGGCCTTGTAAAAGTTCTTTTCGCCACCGAGACTTTTGCGATGGGTGTAAACATGCCTGCCAGGACCGTAGTGTTCGACAGCATCCGCAAACACGATGGAACTGGATTCAGAAACCTTCAtcctgGTGAGTACATACAGATGGCAGGGCGAGCAGGCAGAAGAGGGCTGGATGCTACAGGCACTGTCATCATCCTCTGCAAGACTGGAGTTCATGAAATGGCGGATCTGCACACGATGATGCTGGGAAAGCCAACGTTGCTGCAGTCCCAGTTCAGGCTGACTTACACCATGATCCTCAACCTGCTGCGAGTCGAGGCTCTCAGAGTCACCGACATGATGCGCAGGAGCTTCTCTGAGAGCCACAGGGACACACAGGCCAATGAGAGGAGGATATCGGAGTTGAAAAGTGAGCTTTCCTCTCTCCCACCTCTTGACACAGAGGGTCAGTTATCTGATCTGCTCTCCTATTACCACACATTGACAGAGCTACGCATAACAACAGAAGCCCTGCAGCAAGCAGTGATGGAGTCAGTGAATGGAATGAAGGCCTTGTCAGTGGGGCGGGTTGTTGTGGTCAACAACGCTCAGCACTTCAACGCCCTGGCTGTCCTCTTACAGGTGTCCACTGACTCTGTGAATCGGACGTTCACTGCCCTCATCATTTGTGATAAAGGGAACGAAGAAGCAGCAGGACCCATACAGAACAACCGGGAGTTCACACACCTTCACAACAGCAGCCTTTTCATCCCAGAGGGTCCCTGCAGTCACACAGTGCAGAAGCTGAAGCCGCAGGACATCTCAGCCATCACAGTTAAGACCCTGAAGGTCATTCCAGAGAGGATTATCGATAACTATAACAAGAGACAGCAACCCCGCTTCAGACTGGATCCACCCGGTCAAGCCATTTCCACTGCGACTCAGGAGCTCCTGCGATTGGCCGAGGCCAGCCCAGATGGCATCGCGACCCTCGACCCTGTGAATGACCTCCACCTGAAGGGTGTGGATGTGGTGGAGGGTGTGATGAGGCAGCGAGTCCTTCGGGACAGCCTCAAAGACTTCCACTGCACCCACTCACCCACCTTCACTGAGCAGTTTGCACGTGTGCAGGAGCGGATGAAACTGCAGGAAGAGTTGGATAAACTGCTGTTCTTGATCTCAGATCAGTCACTGACTCTGCTGCCAGAGTACCACCAGAGGATTAAGGTCCTGGAGGCTCTGAATTACATTGATGGTAGCGGAGCGGTGCAGCTGAAGGGTCGAGTGGCGTGTCAGATCAGCAGTCATGAGCTCCTGctcacagagctgctgtttgagAACACACTGAGTCCTCTGGCCCCGGAGGAGAGCGCCGCCCTGCTGTCCTGCCTCGTCTTCACACAGAACACTCAGATAGAACCGCACATCCCCAACACGATCCAAGAGGCAATCGATCGGGTGCTGTGCGTGGCTCAACGTATCGGGGAGCTACAGCGCGACTGTGGCCTCTCTCAGACCGTCGAAGACTTTGTGTCCCAGTTTAAGTTTGGCCTGACTGAGGTGGTGTACTGCTGGGCCAGAGGAATGCCCTTTGCAGAGATCGCCCAGCTGACGGACGTGCAGGAGGGAACGGTGGTGCGCTGCATTCAGAGACTGGATGAAGTTCTGAAGGAGGTTAGACAAGCAGCCCGAATTGTAGGAGATTCGGTTTTGGGCAGCAAGATGGAGAGAGCATCGCTGGCCATTCGCAGAGACATCGTGTTCACGGCATCTCTTTATACGCACTGAGAGAGTGTGCGCCTCAGgatggctgagtgtgtgtgctaatGTGTAAAAATGGGCAAGTAAACATAAAGTGCCAGTTaatgattgcatgaatgtgctAACATCCTAATTAATTGATGTGTAACAGCGAAAACACTGAGGATCAGCGTGCATTGTTGAAGGAGAAATGGCCATTTTACATCTGTAATGATTAAAGATGGCGCCTCTGAGCACTGAAGACAGCTGAAGATACTAAATCCATGTGATTGCAGCTTTGAAGTGGGTCCAAATgtttacattgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagggagagagagagtgagtttgCTTGCATTGTTAAGAAAGCAGTAATGTCTGATGAATTGGAAATCAAAGACAAAACCAATCATGGGCTGTAATTTATTGTACAGTAATAAAATCCACTGTATCTGAAATGAGCGATAGTCCACTCCACAGCACTACATGTCAACTCTAGTAAAACAAATACAACTAGGAGCTGGGGCTCCTAGTAAACATTACATTGACTGTCttgtaaaatgaatttaaaagaaTCTCAAAAAAAGAGACGTAGTGATTAAGGATGGAACTATATGATAAATTCAAGCATGATAATCATGCAAACGATATTCTCTGCCATATAACAGTGTGGTAGAAATTGCTCTTAGCCTTCATTGTAGAATCTAAAATAGCACTTTCCCTGATCATGTAGCAGATTTTCACAGAACGTCCTGCAACACAAATTCATCAGTGTAGCATAACGTTACACTTAGAGTTATTTCAGAATTCCTCAACACACTTTACTTTCATACCTGGTACACTGTCACACTCCtaataatgatattatttataatcatttccGTCATACAGCAATATTCTTGGTCATAAGTACAATGAAAAAGTCCGTGTTTAAGGGATGTGTGTAAGTTAGCTCCTCTTTGTCAACATGACTGTGCTTTCAGATCAGTTGTATTATAATTGTCAGATCACAGATGCATAAAGTGTACATGTTTGCTGACTTTTTCCCTTGCTTTTGGTAGAGATTTAtcaaaaaatgccattttttttttattctaaaactTTAAATGCTGCTAAATGTCTGCCTTGGTTGCTATATTAAGCTAGCAAGCAAGTGTTACTAGCTAATGTTCATTGACTATATCGGCTAGCTAACATGGCTAAACATCCTTCACTCAATACTAGACAAGCTAATTCAATAAACcttttacaaaaata
>XM_034301529.1
ATGGAGAAGATAAatttgcCAGCCCCTGGCCCTGATGATCTGCCTCTGTCCCTGCTGGAGATGGGCTGTTCAGGGAAGTTTGAGCTCCTCACACACCCACAGCCTGGTCACACACCCTTCCCACCACAGAGCACGcttCCTCATGGGCTTCCTCCATTCAGTCTGGACCTGAAGATGGAGGTAGAGAAACGTTTCCTGCAGGATCCCGCATGGATGCCCATACACGATACCACAGACGCCTTCCAGAAGTTTCTTAAACTGACTAAAAGGGACAGACAAGTGGATTCGTTGTTGCACTGTTCGCTGTCTCCTCTGCACTCGGGTCTGTCTGTAGTGAGAGATCCCACCACCGGCATGCTGCTGGATTTTACagagGTGTTGCTGGAGCACACTGGCTTGTCAGCAAAGAACTCTTTATCAATGCAGCGGCAGCCTGGACCTCCATCTGAGAGCCTGAGAGGCAGCAACACCAACTACCCCTTCCTACCAGGTGGTATGGAGGAGCTGACGTTAGAGCAGATAAAGAAAAAGTCCGAGTTGGAGGAGGACATTGACTTTGAGAATGATTTACTGACGGTGCCTCCGGGGCTAAAAGCTGGCATGAACTTCAGTAACAAAGAAGCTAACACTACAAAAGGAGACGTGAACCTGCTGTCCCTGCTGTCTACGTTTGATGATATAATTGAACCTGTGcctgaggagaaagagagaagctcAGGAAGTGGAGAGGAGTCCAAACTCCACAGAACTAACAGCCTTGAGGATCTGGGCATTAAGGACACACTGCCATCTCCTGCTCCCGCTGGAGCTTCATCACCGAGCAAGACAGATGGAGGAATACAGAAAatcagagaagaaaagaaggaaaggaagtgGGCTATGCCTGTGGACATCACCTCTCCGTGTGAGGATTTCTACAAACGAATCCCCAATCCTGCTTTTAAGtaCCCGTTTGAGCTGGACGTGTTTCAGAAGCAGGCTATCCTCAGGCTTGAGGCTCACGACTCGGTCTTTGTGGCTGCTCACACCTCGGCGGGCAAGACTGTGGTGGCTGAGTACGCCATAGCGCTCTCGCAAAAACACatgaccagAACCATCTACACGTCCCCCATTAAAgctctgtccaatcagaaatTCCGCGACTTTAAGAACACATTTGGTGATGTTGGGCTTTTGACTGGAGATGTTCAGCTAAACCCTGAGGCCTCCTGTCTCATCATGACCACTGAAATATTGAGgtctaTGCTGTATAACGGCTCAGAGGTCATTCGGGACCTGGAGTGGGTTATATTCGACGAGGTTCATTACATCAACGATGCCGAGcGGGGTGTTGTGTGGGAGGAAGTGCTCATCATGCTGCCTGAACATGTTAGCATTATTTTGCTCAGTGCTACAGTGCCCAATGCAGTGGAGTTTAGCGAATGGATCGGgCGTATAAAGAAGAGGCCGATCTACGTGATCAGTACAGTGAAGAGACCGGTGCCACTGGAGCACTACCTCTACACAGGAAACAGCACCAAGACTCAGAAAGAGCTCTTCCTCCTGCTGGATGCTACCGGAGGTTTCCTCACCAAAGGGTACTACGCCGCTGTGGAGGCCAAAAAGGAGCGCACCAGTAAACATGCCCAGTCTTTTGGTACGAAGAAGGTGTCACAGAGCACCACACCAAGTCAGgaccGGGCTGTGTGGCAGACGCTGCTCAACTTCCTGTCAGAGAGGCAGCAGACTCCGGTGGTGGCGTTCACCTTCTCACGCACACGCTGTGATGAAAACGCTCGCTCGCTCACCTCTCTGGACCTGACCACCTCAGTGGAGAAGAACGAGATCCACTCCTTCTTCCAAAAGAGTCTGAGCAGGCTGAGAGGAGGAGACCGTCAACTCCCTCAGATCCTGCTGATGAGGGACTTGCTGAAGAGAGGCATTGCCGTGCACCACAGCGGCATCCTGCCGATCCTGAAGGAGGTCATCGAAATGCTTTTCTCTAGAGGCCTTGTAAAAGTTCTTTTCGCCACCGAGACTTTTGCGATGGGTGTAAACATGCCTGCCAGGACCGTAGTGTTCGACAGCATCCGCAAACACGATGGAACTGGATTCAGAAACCTTCAtcctgGTGAGTACATACAGATGGCAGGGCGAGCAGGCAGAAGAGGGCTGGATGCTACAGGCACTGTCATCATCCTCTGCAAGACTGGAGTTCATGAAATGGCGGATCTGCACACGATGATGCTGGGAAAGCCAACGTTGCTGCAGTCCCAGTTCAGGCTGACTTACACCATGATCCTCAACCTGCTGCGAGTCGAGGCTCTCAGAGTCACCGACATGATGCGCAGGAGCTTCTCTGAGAGCCACAGGGACACACAGGCCAATGAGAGGAGGATATCGGAGTTGAAAAGTGAGCTTTCCTCTCTCCCACCTCTTGACACAGAGGGTCAGTTATCTGATCTGCTCTCCTATTACCACACATTGACAGAGCTACGCATAACAACAGAAGCCCTGCAGCAAGCAGTGATGGAGTCAGTGAATGGAATGAAGGCCTTGTCAGTGGGGCGGGTTGTTGTGGTCAACAACGCTCAGCACTTCAACGCCCTGGCTGTCCTCTTACAGGTGTCCACTGACTCTGTGAATCGGACGTTCACTGCCCTCATCATTTGTGATAAAGGGAACGAAGAAGCAGCAGGACCCATACAGAACAACCGGGAGTTCACACACCTTCACAACAGCAGCCTTTTCATCCCAGAGGGTCCCTGCAGTCACACAGTGCAGAAGCTGAAGCCGCAGGACATCTCAGCCATCACAGTTAAGACCCTGAAGGTCATTCCAGAGAGGATTATCGATAACTATAACAAGAGACAGCAACCCCGCTTCAGACTGGATCCACCCGGTCAAGCCATTTCCACTGCGACTCAGGAGCTCCTGCGATTGGCCGAGGCCAGCCCAGATGGCATCGCGACCCTCGACCCTGTGAATGACCTCCACCTGAAGGGTGTGGATGTGGTGGAGGGTGTGATGAGGCAGCGAGTCCTTCGGGACAGCCTCAAAGACTTCCACTGCACCCACTCACCCACCTTCACTGAGCAGTTTGCACGTGTGCAGGAGCGGATGAAACTGCAGGAAGAGTTGGATAAACTGCTGTTCTTGATCTCAGATCAGTCACTGACTCTGCTGCCAGAGTACCACCAGAGGATTAAGGTCCTGGAGGCTCTGAATTACATTGATGGTAGCGGAGCGGTGCAGCTGAAGGGTCGAGTGGCGTGTCAGATCAGCAGTCATGAGCTCCTGctcacagagctgctgtttgagAACACACTGAGTCCTCTGGCCCCGGAGGAGAGCGCCGCCCTGCTGTCCTGCCTCGTCTTCACACAGAACACTCAGATAGAACCGCACATCCCCAACACGATCCAAGAGGCAATCGATCGGGTGCTGTGCGTGGCTCAACGTATCGGGGAGCTACAGCGCGACTGTGGCCTCTCTCAGACCGTCGAAGACTTTGTGTCCCAGTTTAAGTTTGGCCTGACTGAGGTGGTGTACTGCTGGGCCAGAGGAATGCCCTTTGCAGAGATCGCCCAGCTGACGGACGTGCAGGAGGGAACGGTGGTGCGCTGCATTCAGAGACTGGATGAAGTTCTGAAGGAGGTTAGACAAGCAGCCCGAATTGTAGGAGATTCGGTTTTGGGCAGCAAGATGGAGAGAGCATCGCTGGCCATTCGCAGAGACATCGTGTTCACGGCATCTCTTTATACGCACTGAGAGAGTGTGCGCCTCAGgatggctgaCGAAAACACTGAGGATCAGCGTGCATTGTTGAAGGAGAAATGGCCATTTTACATCTGTAATGATTAAAGATGGCGCCTCTGAGCACTGAAGACAGCTGAAGATACTAAATCCATGTGATTGCAGCTTTGAAGTGGGTCCAAATgtttacattgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagggagagagagagtgagtttgCTTGCATTGTTAAGAAAGCAGTAATGTCTGATGAATTGGAAATCAAAGACAAAACCAATCATGGGCTGTAATTTATTGTACAGTAATAAAATCCACTGTATCTGAAATGAGCGATAGTCCACTCCACAGCACTACATGTCAACTCTAGTAAAACAAATACAACTAGGAGCTGGGGCTCCTAGTAAACATTACATTGACTGTCttgtaaaatgaatttaaaagaaTCTCAAAAAAAGAGACGTAGTGATTAAGGATGGAACTATATGATAAATTCAAGCATGATAATCATGCAAACGATATTCTCTGCCATATAACAGTGTGGTAGAAATTGCTCTTAGCCTTCATTGTAGAATCTAAAATAGCACTTTCCCTGATCATGTAGCAGATTTTCACAGAACGTCCTGCAACACAAATTCATCAGTGTAGCATAACGTTACACTTAGAGTTATTTCAGAATTCCTCAACACACTTTACTTTCATACCTGGTACACTGTCACACTCCtaataatgatattatttataatcatttccGTCATACAGCAATATTCTTGGTCATAAGTACAATGAAAAAGTCCGTGTTTAAGGGATGTGTGTAAGTTAGCTCCTCTTTGTCAACATGACTGTGCTTTCAGATCAGTTGTATTATAATTGTCAGATCACAGATGCATAAAGTGTACATGTTTGCTGACTTTTTCCCTTGCTTTTGGTAGAGATTTAtcaaaaaatgccattttttttttattctaaaactTTAAATGCTGCTAAATGTCTGCCTTGGTTGCTATATTAAGCTAGCAAGCAAGTGTTACTAGCTAATGTTCATTGACTATATCGGCTAGCTAACATGGCTAAACATCCTTCACTCAATACTAGACAAGCTAATTCAATAAACcttttacaaaaata
>XM_034301530.1
ttattttgtttttaataccGGCGGTGTTCATTTAAAATGGCTAAATTGACAGCCAGCTGGTTGAATCCCAAATGGATTCCGGTTCCTTATGTATgtgcactctgtagggtgtgagtgagtgggaTAACgcgccctatgtagtgcactataagTGTGAGTGGAAGTAATTTGGAATTCGGTACCTTGTTAGCTAACTTGGCTAGCGTGAATAATTCATTatttgcCAGCCCCTGGCCCTGATGATCTGCCTCTGTCCCTGCTGGAGATGGGCTGTTCAGGGAAGTTTGAGCTCCTCACACACCCACAGCCTGGTCACACACCCTTCCCACCACAGAGCACGcttCCTCATGGGCTTCCTCCATTCAGTCTGGACCTGAAGATGGAGGTAGAGAAACGTTTCCTGCAGGATCCCGCATGGATGCCCATACACGATACCACAGACGCCTTCCAGAAGTTTCTTAAACTGACTAAAAGGGACAGACAAGTGGATTCGTTGTTGCACTGTTCGCTGTCTCCTCTGCACTCGGGTCTGTCTGTAGTGAGAGATCCCACCACCGGCATGCTGCTGGATTTTACagagGTGTTGCTGGAGCACACTGGCTTGTCAGCAAAGAACTCTTTATCAATGCAGCGGCAGCCTGGACCTCCATCTGAGAGCCTGAGAGGCAGCAACACCAACTACCCCTTCCTACCAGGTGGTATGGAGGAGCTGACGTTAGAGCAGATAAAGAAAAAGTCCGAGTTGGAGGAGGACATTGACTTTGAGAATGATTTACTGACGGTGCCTCCGGGGCTAAAAGCTGGCATGAACTTCAGTAACAAAGAAGCTAACACTACAAAAGGAGACGTGAACCTGCTGTCCCTGCTGTCTACGTTTGATGATATAATTGAACCTGTGcctgaggagaaagagagaagctcAGGAAGTGGAGAGGAGTCCAAACTCCACAGAACTAACAGCCTTGAGGATCTGGGCATTAAGGACACACTGCCATCTCCTGCTCCCGCTGGAGCTTCATCACCGAGCAAGACAGATGGAGGAATACAGAAAatcagagaagaaaagaaggaaaggaagtgGGCTATGCCTGTGGACATCACCTCTCCGTGTGAGGATTTCTACAAACGAATCCCCAATCCTGCTTTTAAGtaCCCGTTTGAGCTGGACGTGTTTCAGAAGCAGGCTATCCTCAGGCTTGAGGCTCACGACTCGGTCTTTGTGGCTGCTCACACCTCGGCGGGCAAGACTGTGGTGGCTGAGTACGCCATAGCGCTCTCGCAAAAACACatgaccagAACCATCTACACGTCCCCCATTAAAgctctgtccaatcagaaatTCCGCGACTTTAAGAACACATTTGGTGATGTTGGGCTTTTGACTGGAGATGTTCAGCTAAACCCTGAGGCCTCCTGTCTCATCATGACCACTGAAATATTGAGgtctaTGCTGTATAACGGCTCAGAGGTCATTCGGGACCTGGAGTGGGTTATATTCGACGAGGTTCATTACATCAACGATGCCGAGcGGGGTGTTGTGTGGGAGGAAGTGCTCATCATGCTGCCTGAACATGTTAGCATTATTTTGCTCAGTGCTACAGTGCCCAATGCAGTGGAGTTTAGCGAATGGATCGGgCGTATAAAGAAGAGGCCGATCTACGTGATCAGTACAGTGAAGAGACCGGTGCCACTGGAGCACTACCTCTACACAGGAAACAGCACCAAGACTCAGAAAGAGCTCTTCCTCCTGCTGGATGCTACCGGAGGTTTCCTCACCAAAGGGTACTACGCCGCTGTGGAGGCCAAAAAGGAGCGCACCAGTAAACATGCCCAGTCTTTTGGTACGAAGAAGGTGTCACAGAGCACCACACCAAGTCAGgaccGGGCTGTGTGGCAGACGCTGCTCAACTTCCTGTCAGAGAGGCAGCAGACTCCGGTGGTGGCGTTCACCTTCTCACGCACACGCTGTGATGAAAACGCTCGCTCGCTCACCTCTCTGGACCTGACCACCTCAGTGGAGAAGAACGAGATCCACTCCTTCTTCCAAAAGAGTCTGAGCAGGCTGAGAGGAGGAGACCGTCAACTCCCTCAGATCCTGCTGATGAGGGACTTGCTGAAGAGAGGCATTGCCGTGCACCACAGCGGCATCCTGCCGATCCTGAAGGAGGTCATCGAAATGCTTTTCTCTAGAGGCCTTGTAAAAGTTCTTTTCGCCACCGAGACTTTTGCGATGGGTGTAAACATGCCTGCCAGGACCGTAGTGTTCGACAGCATCCGCAAACACGATGGAACTGGATTCAGAAACCTTCAtcctgGTGAGTACATACAGATGGCAGGGCGAGCAGGCAGAAGAGGGCTGGATGCTACAGGCACTGTCATCATCCTCTGCAAGACTGGAGTTCATGAAATGGCGGATCTGCACACGATGATGCTGGGAAAGCCAACGTTGCTGCAGTCCCAGTTCAGGCTGACTTACACCATGATCCTCAACCTGCTGCGAGTCGAGGCTCTCAGAGTCACCGACATGATGCGCAGGAGCTTCTCTGAGAGCCACAGGGACACACAGGCCAATGAGAGGAGGATATCGGAGTTGAAAAGTGAGCTTTCCTCTCTCCCACCTCTTGACACAGAGGGTCAGTTATCTGATCTGCTCTCCTATTACCACACATTGACAGAGCTACGCATAACAACAGAAGCCCTGCAGCAAGCAGTGATGGAGTCAGTGAATGGAATGAAGGCCTTGTCAGTGGGGCGGGTTGTTGTGGTCAACAACGCTCAGCACTTCAACGCCCTGGCTGTCCTCTTACAGGTGTCCACTGACTCTGTGAATCGGACGTTCACTGCCCTCATCATTTGTGATAAAGGGAACGAAGAAGCAGCAGGACCCATACAGAACAACCGGGAGTTCACACACCTTCACAACAGCAGCCTTTTCATCCCAGAGGGTCCCTGCAGTCACACAGTGCAGAAGCTGAAGCCGCAGGACATCTCAGCCATCACAGTTAAGACCCTGAAGGTCATTCCAGAGAGGATTATCGATAACTATAACAAGAGACAGCAACCCCGCTTCAGACTGGATCCACCCGGTCAAGCCATTTCCACTGCGACTCAGGAGCTCCTGCGATTGGCCGAGGCCAGCCCAGATGGCATCGCGACCCTCGACCCTGTGAATGACCTCCACCTGAAGGGTGTGGATGTGGTGGAGGGTGTGATGAGGCAGCGAGTCCTTCGGGACAGCCTCAAAGACTTCCACTGCACCCACTCACCCACCTTCACTGAGCAGTTTGCACGTGTGCAGGAGCGGATGAAACTGCAGGAAGAGTTGGATAAACTGCTGTTCTTGATCTCAGATCAGTCACTGACTCTGCTGCCAGAGTACCACCAGAGGATTAAGGTCCTGGAGGCTCTGAATTACATTGATGGTAGCGGAGCGGTGCAGCTGAAGGGTCGAGTGGCGTGTCAGATCAGCAGTCATGAGCTCCTGctcacagagctgctgtttgagAACACACTGAGTCCTCTGGCCCCGGAGGAGAGCGCCGCCCTGCTGTCCTGCCTCGTCTTCACACAGAACACTCAGATAGAACCGCACATCCCCAACACGATCCAAGAGGCAATCGATCGGGTGCTGTGCGTGGCTCAACGTATCGGGGAGCTACAGCGCGACTGTGGCCTCTCTCAGACCGTCGAAGACTTTGTGTCCCAGTTTAAGTTTGGCCTGACTGAGGTGGTGTACTGCTGGGCCAGAGGAATGCCCTTTGCAGAGATCGCCCAGCTGACGGACGTGCAGGAGGGAACGGTGGTGCGCTGCATTCAGAGACTGGATGAAGTTCTGAAGGAGGTTAGACAAGCAGCCCGAATTGTAGGAGATTCGGTTTTGGGCAGCAAGATGGAGAGAGCATCGCTGGCCATTCGCAGAGACATCGTGTTCACGGCATCTCTTTATACGCACTGAGAGAGTGTGCGCCTCAGgatggctgagtgtgtgtgctaatGTGTAAAAATGGGCAAGTAAACATAAAGTGCCAGTTaatgattgcatgaatgtgctAACATCCTAATTAATTGATGTGTAACAGCGAAAACACTGAGGATCAGCGTGCATTGTTGAAGGAGAAATGGCCATTTTACATCTGTAATGATTAAAGATGGCGCCTCTGAGCACTGAAGACAGCTGAAGATACTAAATCCATGTGATTGCAGCTTTGAAGTGGGTCCAAATgtttacattgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagggagagagagagtgagtttgCTTGCATTGTTAAGAAAGCAGTAATGTCTGATGAATTGGAAATCAAAGACAAAACCAATCATGGGCTGTAATTTATTGTACAGTAATAAAATCCACTGTATCTGAAATGAGCGATAGTCCACTCCACAGCACTACATGTCAACTCTAGTAAAACAAATACAACTAGGAGCTGGGGCTCCTAGTAAACATTACATTGACTGTCttgtaaaatgaatttaaaagaaTCTCAAAAAAAGAGACGTAGTGATTAAGGATGGAACTATATGATAAATTCAAGCATGATAATCATGCAAACGATATTCTCTGCCATATAACAGTGTGGTAGAAATTGCTCTTAGCCTTCATTGTAGAATCTAAAATAGCACTTTCCCTGATCATGTAGCAGATTTTCACAGAACGTCCTGCAACACAAATTCATCAGTGTAGCATAACGTTACACTTAGAGTTATTTCAGAATTCCTCAACACACTTTACTTTCATACCTGGTACACTGTCACACTCCtaataatgatattatttataatcatttccGTCATACAGCAATATTCTTGGTCATAAGTACAATGAAAAAGTCCGTGTTTAAGGGATGTGTGTAAGTTAGCTCCTCTTTGTCAACATGACTGTGCTTTCAGATCAGTTGTATTATAATTGTCAGATCACAGATGCATAAAGTGTACATGTTTGCTGACTTTTTCCCTTGCTTTTGGTAGAGATTTAtcaaaaaatgccattttttttttattctaaaactTTAAATGCTGCTAAATGTCTGCCTTGGTTGCTATATTAAGCTAGCAAGCAAGTGTTACTAGCTAATGTTCATTGACTATATCGGCTAGCTAACATGGCTAAACATCCTTCACTCAATACTAGACAAGCTAATTCAATAAACcttttacaaaaata

Function

symbol description
skiv2l Predicted to enable RNA helicase activity. Predicted to be involved in nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay. Predicted to be part of Ski complex. Human ortholog(s) of this gene implicated in trichohepatoenteric syndrome 2. Orthologous to human SKIV2L (Ski2 like RNA helicase).

NR:

description
PREDICTED: helicase SKI2W

GO:

id name namespace
GO:0006200 obsolete ATP catabolic process biological_process
GO:0005524 ATP binding molecular_function
GO:0003676 nucleic acid binding molecular_function

KEGG:

id description
K12599 SKI2, SKIV2L; antiviral helicase SKI2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026942254.2 False 5191 mRNA 0.49 29 6150852 6171006
XM_034301529.1 False 4889 mRNA 0.49 30 6150852 6170802
XM_034301530.1 True 5192 mRNA 0.49 29 6150852 6170707

Neighbor

gene id symbol gene type direction distance location
prrt1 prrt1,LOC108272790,LOC107694357,LOC107584308,LOC107595589,LOC107677474 coding downstream 1663 6138533 ~ 6149189 (-)
LOC113543800 LOC108272740,LOC108411932 coding downstream 26059 6118091 ~ 6124793 (-)
neu1 LOC108272741,LOC103030882,LOC108411940,LOC108411932 coding downstream 36417 6109273 ~ 6114435 (-)
prrc2a prrc2a,LOC103472915,LOC104953786 coding downstream 45519 6084909 ~ 6105333 (-)
csnk2b csnk2b,LOC102207154,LOC100710962,LOC101175345,LOC102778826,LOC106573472 coding downstream 68668 6075576 ~ 6082184 (-)
LOC113543872 zbtb12,zbtb12.2,LOC107694350,LOC107584307,LOC107595591,LOC107711327 coding upstream 4848 6175854 ~ 6183941 (-)
sacm1la sacm1l,sacm1la,LOC108273174,LOC107677458,LOC107711326,LOC107694349,LOC107584306,LOC107754789,LOC105904713 coding upstream 18086 6189092 ~ 6208987 (-)
gabbr1b gabbr1,LOC107584305,LOC107677456 coding upstream 56847 6227853 ~ 6337451 (-)
sh3bp5lb sh3bp5l,LOC108435520 coding upstream 178879 6349885 ~ 6357426 (-)
gtf2h4 gtf2h4,LOC107694324,LOC107584301,LOC107595596 coding upstream 189619 6360625 ~ 6370712 (-)
G401196 NA non-coding downstream 129087 6021554 ~ 6021765 (-)
G401106 NA non-coding downstream 179678 5907147 ~ 5971174 (-)
G400913 NA non-coding downstream 338840 5811344 ~ 5812012 (-)
G400826 NA non-coding downstream 563471 5583555 ~ 5587381 (-)
G400676 NA non-coding downstream 769915 5371072 ~ 5380937 (-)
G401243 NA non-coding upstream 16967 6187973 ~ 6188409 (-)
G401259 NA non-coding upstream 76450 6247456 ~ 6250036 (-)
G401388 NA non-coding upstream 188748 6359754 ~ 6359977 (-)
G401403 NA non-coding upstream 234300 6405306 ~ 6405878 (-)
LOC113543850 NA non-coding upstream 264525 6435531 ~ 6437074 (-)
G400815 NA other downstream 561105 5587398 ~ 5589747 (-)
LOC113543870 LOC108272368,LOC108261349,LOC108261350 other downstream 1010472 5128235 ~ 5140380 (-)
sept7a LOC108272655,LOC108441798,LOC107698647 other downstream 1142388 4961102 ~ 5008464 (-)
polr3gla LOC108272317,LOC108415116 other downstream 1515795 4597800 ~ 4635057 (-)
maptb mapt,LOC108272803,LOC108439131 other downstream 1812425 4295216 ~ 4338427 (-)
G401205 nelfe other upstream 1982 6172988 ~ 6175260 (-)
polr1h znrd1,LOC107677479,LOC107754832,LOC107584303,LOC107694346 other upstream 200611 6371617 ~ 6374500 (-)
fndc5b fndc5b,LOC108272379,LOC108433842,LOC107584283,LOC107691512,LOC107687074,LOC107562878,LOC107709291 other upstream 1083427 7254433 ~ 7276782 (-)
tmem64 tmem64,LOC107696193,LOC107584320 other upstream 1698397 7869403 ~ 7917693 (-)
G402673 NA other upstream 2972864 9143870 ~ 9161470 (-)

Expression


Co-expression Network