gh1


Basic Information

Item Value
gene id gh1
gene name NA
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047623.1
NCBI id CM018569.1
chromosome length 15305753
location 4488748 ~ 4491287 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026942413.2
GCCATTCACTGAGACTTCAGCGAGATCTGACAAAGTTTCTTCAGAGCGATTTGGCAAAATGGCTAGAGtgttggTGGTGCTCTCTGTGGTGGTGGCGAGTTTGTTCTTTAGTCAAGGCGCGACATTCGAGAACCAGCGGCTCTTCAACAACGCAGTCATCCGTGTGCAACACCTTCATCAGCTGGCTGCCAAGATGATGGATGACTTTGAGGAAGCTCTGTTACCTGAAGAACGCAAACAGCTGAGCAAGATTTTCCCCCTGTCTTTCTGCAACTCGGACTCCATCGAAGCTCCTGCAGGCAAGGACGAGACCCAGAAAAGCTCTGTGCTGAAATTGCTGCACACCTCCTACCGTCTGATCGAGTCATGGGAGTTCCCCAGCAAGAACCTCGGCAACCCCAACCACATCTCAGAGAAGCTGGCTGACCTGAAAATGGGCATCGGCGTGCTTATCGAGGGATGTTTGGATGGACAAACCAGCCTGGATGAGAACGACTCTCTGGCTCCGCCCTTCGAGGATTTCTACCAGACCTTGAGCGAGGGAAACCTGAGGAAGAGCTTCCGTCTGCTGTCCTGCTTCAAGAAGGACATGCACAAAGTGGAGACCTATCTCAGCGTGGCCAAGTGCAGGAGATCCCTGGATTCCAACTGCACCCTGTAGGGGGCGAGAGAGCACAATTTAGCCACAGCCTGTGATCTCAGACagattttgtatttaaattaaaaaaaaaaatctgtccagGCCTGGCTAAATGTATCAGCCTCTTTCTCTGGTTTCACTTCTGactttatgtatttattctgcTCACCGAGGAGAACTCCTCCATTCACATTTTTAGCAGATTTCTCTGTCCCGGCAACTTAAAGGTTGTAAAATGGGACCAATTTCACAATGGTGCTATGCAAATTCAGCTTTATATCAAATAATGACCAGAAAAATGACTAGGTCTATTTCTTTTAACTTATTGGCTACAAATTGGATAATCTGATTTAACAATCGTGTTAACTTTGGAATGGACGAGTTCGCTCCTGGCCAGTGAATGTTAAATATTCAAAGTGTATATTTTCATATCAAAGTCTATACTTATTGTTCAGCATTGACTATT

Function

NR:

description
unnamed protein product

GO:

id name namespace
GO:0005576 extracellular region cellular_component
GO:0046872 metal ion binding molecular_function
GO:0005179 hormone activity molecular_function

KEGG:

id description
K05438 GH; growth hormone

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026942413.2 True 1106 mRNA 0.46 5 4488748 4491287

Neighbor

gene id symbol gene type direction distance location
zfpm2b LOC108272465 coding downstream 32148 4418578 ~ 4456600 (-)
LOC113543884 NA coding downstream 71911 4411699 ~ 4416837 (-)
myl4 myl4,LOC107694961,LOC107754315,LOC107585102,LOC107740645,LOC107662407 coding downstream 143534 4339535 ~ 4345214 (-)
LOC113534587 NA coding downstream 301024 4179111 ~ 4187724 (-)
LOC117596407 NA coding downstream 313594 4170470 ~ 4175154 (-)
LOC113543882 NA coding upstream 6606 4497893 ~ 4500858 (-)
thbs3b LOC108272910 coding upstream 16194 4507481 ~ 4525407 (-)
mtx1b mtx1b,mtx1,LOC108272909,LOC103026555,LOC108410892 coding upstream 43709 4534996 ~ 4553366 (-)
si:dkeyp-92c9.4 NA coding upstream 176500 4667787 ~ 4691369 (-)
si:dkey-81h8.1 LOC108272626,LOC103028165,LOC107702549,LOC107672832,LOC107710627,LOC108442974 coding upstream 203179 4694466 ~ 4706433 (-)
G400112 LOC108272813 non-coding downstream 195591 4234403 ~ 4293157 (-)
G400133 NA non-coding downstream 204355 4284049 ~ 4284393 (-)
G400131 NA non-coding downstream 207315 4280777 ~ 4281433 (-)
G400085 NA non-coding downstream 212266 4190741 ~ 4276482 (-)
G399990 NA non-coding downstream 382421 4100097 ~ 4106327 (-)
G400428 NA non-coding upstream 42554 4533841 ~ 4534131 (-)
G400431 txnip,LOC107702541,LOC107731569,LOC108273074,LOC105012721,LOC105901470 non-coding upstream 67201 4558488 ~ 4562020 (-)
G400432 NA non-coding upstream 70924 4562211 ~ 4563364 (-)
G400477 NA non-coding upstream 288324 4779611 ~ 4785657 (-)
LOC113543895 NA non-coding upstream 321374 4812661 ~ 4817295 (-)
maptb mapt,LOC108272803,LOC108439131 other downstream 150321 4295216 ~ 4338427 (-)
LOC113534684 NA other downstream 328998 4150899 ~ 4159750 (-)
LOC113534693 LOC108272825,LOC108439127,LOC108272467 other downstream 355826 4120397 ~ 4132922 (-)
LOC113525126 sumo2,sumo2b,LOC108411789,LOC103045390,LOC108441874 other downstream 1254424 3224065 ~ 3234324 (-)
LOC113525117 NA other downstream 1292185 3147299 ~ 3196563 (-)
polr3gla LOC108272317,LOC108415116 other upstream 106513 4597800 ~ 4635057 (-)
sept7a LOC108272655,LOC108441798,LOC107698647 other upstream 469815 4961102 ~ 5008464 (-)
LOC113543870 LOC108272368,LOC108261349,LOC108261350 other upstream 636948 5128235 ~ 5140380 (-)
G400815 NA other upstream 1096111 5587398 ~ 5589747 (-)
G401205 nelfe other upstream 1681701 6172988 ~ 6175260 (-)

Expression


Co-expression Network