plbd1 (plbd1)


Basic Information

Item Value
gene id plbd1
gene name plbd1
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047623.1
NCBI id CM018569.1
chromosome length 15305753
location 298761 ~ 310236 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_034301550.1
cacacacacacacacacacacacacacacacacacagagggaattCTCCCCGTAAAAGTTTCACTTCTGTTCCTGCTCCTGACTGCGTCTGAAAAACAACAATGTCGGAGTTTAAActctgtgtttttgtcctgGTGTGTGCGGTGACTGCAGTGAGAACTGACTCTGTGCATAAGGCCACAGTGTACTGGGACCCTGGCAGTAAGACGGTGCTGCTGAAGGACGGGGTTCTGGATGACACAGGAGATGCTTACGGTTACTATAACGACTCGTTCTCAGAGACAGGATGGGGCGTGCTGGAGATCCGCGCCGGGTACGGACAAACACCTAGGGCTGACGACAAAACCTTCTTCCTGGCGGGATATCTGGAGGGATTCCTGACTGCACGGCAGATGATCGATCACTACACTAACATGTATCCTCAGCTCATTACCAGGCCCGACGTCCTGCAGGCCGTCAAGACCTTCATGACtacgcAGAGCGCCTGGTCTCGGCAGCAGGTGAAGCTGAATAAGACATCTGACCCTCTATGGGCTCACACCGGCTTTATCCTGGCTCAGCTGGACGGACTGCAGGCCGGCGCGGCCGAATGGGCCAAACGCTCGGGGAAGAAGgccctGTCACGGTTTGAGGTTCAGTTCCTGAATGCAGTTGGAGATCTGTTGGATTTGATACAGATGTTGGTTCCTGAGGCCAAACCTTCACTGAGAGGATTTAAAGAACCCCCAATGGGCCACTGCTCTGCCCTCATCAAGatgttacCAGGCTATGAGAACCTGCTGTTCGCTCACTCCAGCTGGTACGTTTATGCCGCCACAATGCGCATCTTCAAACACTGGGACTTTAAAGTGCAGGAGCCACACACTGCTACTGGAAAACTCTCCTTCAGCAGCTACCctgGTTTCCTGGTGTCTCTGGATGATTTCTACCTGTTGGGCAGTGGGTTGATGATGACTCAGACCACCAACAACGTTTTTAACCAGTCGCTGTACAAGTCAGTCACTCCCTCCAGCCTGTTCTCCTGGCAGAGGGTCCGGCTAGCCCACGCCCTCGCACACACTGGCAAAGAGTGGGCTGAGATATTCTCCCGCTACAACTCTGGGACGTATAATAACCAGTACATGGTAGTGGATGTGAGTAAAGTGTCCCTGGGCTCGAGACTCGACGATGGTGCTCTGACCATAGTGGAGCAGATCCCAGGACTGGTGGAATATTCAGATCAAACGGAGGCTCTGCGCTTCGGTTACTGGCCGTCCTACAATGTGCCGTTCCACCAGAGCATCTACACCCTGAGCGGTTACAAGGAGATGTGGACGGAGTATGGAGAGGATTACTCCTACGAACTCTGTCCTCGAGCCAAGATCTTCCGCCGGGATCAGGCGTCCGTCACTGATCTGCCGTCACTCAAACACATCATGAGATACAACGACTATAAGAAAGATCCCTACTCAAAGGGTGACCCCTGCAAGTCCATCTGCTGTCGCGGCGATCTGCGGGAGTCCAACCCCATTCCTGAAGGATGTTACGACACCAAGGTGACTGACCTGCGTATGGCTCAGCAGTTTGTGTCCGAGGCTCTGAATGGTCCGAGCACAGAAGGCGGCCTTCCTCCTTTCACCTGGGATGCATTTAACAGTACGACGCACCAGGGTCTGCCGCGCCTCTATAACTACACGTTCGTCACCATGCACCCGGTGCTGTTCACTCCCTGAGCCGCCTACGTAGGGCAGGAAGTGAGCGACGAGCAGAGCCTCAGGAACAGTCTGTTTTACTATGTGTCCTGCTCTACAACTGTTTTATCCTTCTGCAATTAAAAGAGCCTGTGAAATATTgtgagtgcttgtgtgtgcgttAGTTATTGTTCAATCTGTTGGTTTTGGTCTGGTTTGAGGAtacatgtgtgtttatgctggataaattaacactgtgtgttcAGATGATTGTTGTAAACATATCACAGCTGCAATTCTGACCAAAGTTAAACTTGTATGTCGTAACATCGATCAGTAAAGACTCAATGTTTAAATACACTAACTGGTGATTTTCTTTAGTATTTCCTCCCTTTTTAACTAAAGTAGCTTACAAAAGAAATGTCAGAATACAATCTAAACACGGAACTGAAAACTTAGGAGGTTAATGATTTGGTTTTGGAAGTCATGGAATTTGATAGGATTTGATTTCTATGGATCACGCATCCATAACATCAGCATTTCCTCAGatttgttggtaaattactaagaaaagactAAAATTGCACTTAGCGTTGAACTCAGCTATCTTAAATGTATGATTTCCCCAGAATTCCCCAAAACTCCCACTTCGCCATACCGTAACTCTCCAGTTCagagatttctgtaaagctgctttgtgaaatgtccattgtttaaaaagtgctatataaataaaattgaactgaaatcgATGGGATTTGATGGGATTTAAACTCTCAAA
>XM_034301551.1
gcacacacacacacacacacacacacacacacacacagagggaattCTCCCCGTAAAAGTTTCACTTCTGTTCCTGCTCCTGACTGCGTCTGAAAAACAACAATGTCGGAGTTTAAActctgtgtttttgtcctgGTGTGTGCGGTGACTGCAGTGAGAACTGACTCTGTGCATAAGGCCACAGTGTACTGGGACCCTGGCAGTAAGACGGTGCTGCTGAAGGACGGGGTTCTGGATGACACAGGAGATGCTTACGGTTACTATAACGACTCGTTCTCAGAGACAGGATGGGGCGTGCTGGAGATCCGCGCCGGGTACGGACAAACACCTAGGGCTGACGACAAAACCTTCTTCCTGGCGGGATATCTGGAGGGATTCCTGACTGCACGGCAGATGATCGATCACTACACTAACATGTATCCTCAGCTCATTACCAGGCCCGACGTCCTGCAGGCCGTCAAGACCTTCATGACtacgcAGAGCGCCTGGTCTCGGCAGCAGGTGAAGCTGAATAAGACATCTGACCCTCTATGGGCTCACACCGGCTTTATCCTGGCTCAGCTGGACGGACTGCAGGCCGGCGCGGCCGAATGGGCCAAACGCTCGGGGAAGAAGgccctGTCACGGTTTGAGGTTCAGTTCCTGAATGCAGTTGGAGATCTGTTGGATTTGATACAGATGTTGGTTCCTGAGGCCAAACCTTCACTGAGAGGATTTAAAGAACCCCCAATGGGCCACTGCTCTGCCCTCATCAAGatgttacCAGGCTATGAGAACCTGCTGTTCGCTCACTCCAGCTGGTACGTTTATGCCGCCACAATGCGCATCTTCAAACACTGGGACTTTAAAGTGCAGGAGCCACACACTGCTACTGGAAAACTCTCCTTCAGCAGCTACCctgGTTTCCTGGTGTCTCTGGATGATTTCTACCTGTTGGGCAGTGGGTTGATGATGACTCAGACCACCAACAACGTTTTTAACCAGTCGCTGTACAAGTCAGTCACTCCCTCCAGCCTGTTCTCCTGGCAGAGGGTCCGGCTAGCCCACGCCCTCGCACACACTGGCAAAGAGTGGGCTGAGATATTCTCCCGCTACAACTCTGGGACGTATAATAACCAGTACATGGTAGTGGATGTGAGTAAAGTGTCCCTGGGCTCGAGACTCGACGATGGTGCTCTGACCATAGTGGAGCAGATCCCAGGACTGGTGGAATATTCAGATCAAACGGAGGCTCTGCGCTTCGGTTACTGGCCGTCCTACAATGTGCCGTTCCACCAGAGCATCTACACCCTGAGCGGTTACAAGGAGATGTGGACGGAGTATGGAGAGGATTACTCCTACGAACTCTGTCCTCGAGCCAAGATCTTCCGCCGGGATCAGGCGTCCGTCACTGATCTGCCGTCACTCAAACACATCATGAGATACAACGTCTGTCTATGCTGCGTTTCACCCTGAGCAGACTATAAGAAAGATCCCTACTCAAAGGGTGACCCCTGCAAGTCCATCTGCTGTCGCGGCGATCTGCGGGAGTCCAACCCCATTCCTGAAGGATGTTACGACACCAAG

Function

symbol description
plbd1 Predicted to enable phospholipase activity. Predicted to be involved in phospholipid catabolic process. Located in extracellular space.

NR:

description
phospholipase B-like 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_034301550.1 True 2451 mRNA 0.49 11 298761 310235
XM_034301551.1 False 1566 mRNA 0.53 11 299979 310236

Neighbor

gene id symbol gene type direction distance location
LOC117596420 NA coding downstream 11624 146928 ~ 287137 (-)
LOC117596421 NA coding downstream 181994 79388 ~ 116767 (-)
LOC113525084 LOC108272484 coding upstream 18625 328861 ~ 339349 (-)
LOC113525087 LOC108272484 coding upstream 30835 341071 ~ 350569 (-)
LOC113525089 LOC108272484 coding upstream 62907 373143 ~ 399186 (-)
LOC113525088 LOC108272487,LOC108272485,LOC108272486 coding upstream 107781 418017 ~ 459183 (-)
LOC113525090 NA coding upstream 218025 528261 ~ 561037 (-)
G398140 NA non-coding downstream 105628 169832 ~ 193133 (-)
G398135 LOC107387363 non-coding downstream 190986 107329 ~ 107775 (-)
trnar-ccu_18 NA non-coding upstream 347 310583 ~ 310655 (-)
LOC117596419 NA non-coding upstream 104229 414465 ~ 417319 (-)
G398304 NA non-coding upstream 284882 595118 ~ 595989 (-)
G398338 NA non-coding upstream 332166 642402 ~ 644009 (-)
G398393 NA non-coding upstream 531700 841936 ~ 846790 (-)
pick1 pick1 other upstream 2172 312408 ~ 325545 (-)
LOC117596396 NA other upstream 163514 473750 ~ 482008 (-)
LOC117596444 smdt1 other upstream 430007 740243 ~ 890302 (-)
fam234b fam234b other upstream 581684 891920 ~ 906375 (-)
LOC117596481 NA other upstream 597389 907625 ~ 907779 (-)

Expression


Co-expression Network