Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC113536357 |
| gene name | NA |
| gene type | misc |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047623.1 |
| NCBI id | CM018569.1 |
| chromosome length | 15305753 |
| location | 914198 ~ 914352 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_003403678.1 | True | 155 | ncRNA | 0.55 | 1 | 914198 | 914352 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC113527139 | NA | coding | downstream | 74757 | 833892 ~ 839441 (-) |
| LOC113527126 | NA | coding | downstream | 149071 | 756001 ~ 765127 (-) |
| LOC113527787 | NA | coding | downstream | 162878 | 747910 ~ 751320 (-) |
| LOC113541895 | kcnj4 | coding | downstream | 180064 | 726950 ~ 734134 (-) |
| sox10 | sox10 | coding | downstream | 221811 | 677903 ~ 692387 (-) |
| LOC117596399 | NA | coding | upstream | 194341 | 1108693 ~ 1111909 (-) |
| LOC113524091 | LOC108272981,LOC108272980,LOC108272984,LOC108273047,LOC108272983 | coding | upstream | 201282 | 1115634 ~ 1124106 (-) |
| LOC117596401 | NA | coding | upstream | 259048 | 1173400 ~ 1176207 (-) |
| LOC113524089 | emp2,LOC100304972 | coding | upstream | 328435 | 1242787 ~ 1250542 (-) |
| zgc:65811 | NA | coding | upstream | 341321 | 1255673 ~ 1267846 (-) |
| G398371 | NA | non-coding | downstream | 32306 | 879025 ~ 881892 (-) |
| G398395 | NA | non-coding | downstream | 62859 | 850450 ~ 851339 (-) |
| G398394 | NA | non-coding | downstream | 65445 | 847745 ~ 848753 (-) |
| G398393 | NA | non-coding | downstream | 67408 | 841936 ~ 846790 (-) |
| G398338 | NA | non-coding | downstream | 270189 | 642402 ~ 644009 (-) |
| G398413 | NA | non-coding | upstream | 27905 | 942257 ~ 944486 (-) |
| G398364 | NA | non-coding | upstream | 35340 | 949692 ~ 996770 (-) |
| G398433 | LOC108272747 | non-coding | upstream | 100591 | 1014943 ~ 1083831 (-) |
| G398437 | NA | non-coding | upstream | 111068 | 1025420 ~ 1102347 (-) |
| G398446 | NA | non-coding | upstream | 162476 | 1076828 ~ 1078028 (-) |
| LOC117596482 | NA | other | downstream | 3975 | 910069 ~ 910223 (-) |
| LOC117596481 | NA | other | downstream | 6419 | 907625 ~ 907779 (-) |
| fam234b | fam234b | other | downstream | 7823 | 891920 ~ 906375 (-) |
| LOC117596444 | smdt1 | other | downstream | 23896 | 740243 ~ 890302 (-) |
| LOC117596396 | NA | other | downstream | 432190 | 473750 ~ 482008 (-) |
| G398408 | poldip3 | other | upstream | 4912 | 919264 ~ 920503 (-) |
| fmc1 | fmc1 | other | upstream | 36850 | 951202 ~ 954200 (-) |
| LOC117596427 | NA | other | upstream | 361926 | 1276278 ~ 1317636 (-) |
| LOC117596459 | NA | other | upstream | 543480 | 1457832 ~ 1462070 (-) |
| LOC113524069 | LOC108261293,LOC108261210 | other | upstream | 547767 | 1462119 ~ 1516314 (-) |
