trnat-ugu_14


Basic Information

Item Value
gene id trnat-ugu_14
gene name NA
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047623.1
NCBI id CM018569.1
chromosome length 15305753
location 14543217 ~ 14543289 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>trnat-ugu_14
TCCTCCAGGGCTCAGTGGTTAGAGCACTGGTCTTGTAAACCAGGGGTTGTGAGTTCAATCCTCACTGGGGCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnat-ugu_14 True 73 tRNA 0.55 1 14543217 14543289

Neighbor

gene id symbol gene type direction distance location
tmem222b tmem222,tmem222b,LOC108273317,LOC103043641,LOC105903612,LOC107550652,LOC107754919 coding downstream 51954 14481937 ~ 14491263 (-)
kdf1b LOC108273298 coding downstream 72399 14460392 ~ 14470818 (-)
nudc nudc,LOC107689540,LOC107700719 coding downstream 90846 14440800 ~ 14452371 (-)
arid1ab LOC108272722,LOC108415569 coding downstream 154751 14320865 ~ 14388466 (-)
tbc1d5 tbc1d5,LOC107592018,LOC107739565,LOC107748680 coding downstream 325047 14195955 ~ 14218170 (-)
trnat-ugu_15 NA coding upstream 2817 14546106 ~ 14546178 (-)
epb41a epb41,LOC107712606 coding upstream 8755 14552044 ~ 14586242 (-)
zbtb22b zbtb22b,LOC108272665,LOC101073910,LOC103355711,LOC104955937,LOC101155366 coding upstream 55206 14598495 ~ 14614761 (-)
ctdp1 ctdp1,LOC107552301,LOC107550068 coding upstream 79392 14622681 ~ 14637333 (-)
daxx daxx coding upstream 109055 14652344 ~ 14670040 (-)
G405707 NA non-coding downstream 157567 14378892 ~ 14385650 (-)
G405681 NA non-coding downstream 214017 14256524 ~ 14329200 (-)
G405701 NA non-coding downstream 228383 14313739 ~ 14314834 (-)
LOC117596429 NA non-coding downstream 351462 14183486 ~ 14191755 (-)
G405575 NA non-coding downstream 466067 14076442 ~ 14077150 (-)
G405900 NA non-coding upstream 75360 14618649 ~ 14686310 (-)
G405901 NA non-coding upstream 76049 14619338 ~ 14654751 (-)
G405906 NA non-coding upstream 101564 14644853 ~ 14966111 (-)
G405909 NA non-coding upstream 144734 14688023 ~ 14720906 (-)
G405917 NA non-coding upstream 156979 14700268 ~ 14704312 (-)
tpbga LOC108272337 other downstream 64140 14475476 ~ 14479077 (-)
G405588 NA other downstream 423559 14114619 ~ 14119658 (-)
npy npy other downstream 459371 14081372 ~ 14083846 (-)
s100a11 s10ab,LOC105901467,LOC102790362,LOC105028986,LOC106570111 other downstream 781660 13759761 ~ 13761557 (-)
cks1b cks1b,LOC108433716,LOC107753514,LOC106570108 other downstream 984586 13556156 ~ 13558631 (-)
G405961 NA other upstream 424187 14967476 ~ 15013988 (-)

Expression


Co-expression Network