G413192


Basic Information

Item Value
gene id G413192
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_022995288.1
NCBI id VFJC01000056.1
chromosome length 62000
location 23875 ~ 30024 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU490702
ACGAATTTCTGTTTTATACGGTCCACTTGGAAATACGCTGAAGACGCAGGTGTAGATTCCTTCATCTAAAGCAGTAACTTTACTTAGAAGAATTGAGCCGCTGAGTCGCGAGATGTTACCTGTGAATTTTACTCTGTCTCTCAATCCATTTATATGTTCCTCTTTGCCATCTGAAGTGATAACCACAAAATCTGTGTTTGCTGGCTTTTCCTTTGTTCGTCTTTGCCACCTAATGCTTGTTAGAGGCTCTCTCGTCTCCACCAGTTGACAGAATAAATGTGCATCATCTCCTGCTGCCACAGTCACATTCTGACCAATGACCCTTatggCCTTTAATTTCGGTCAAAAATAAGAGCACCACACAAATCCCTGTTAATCCCGTGCTGGAATGCATCAGTTAATACATCAAATACATCAGTTAATTTTCAAGACTACATTGTTTTCCCGCATCGGGCCGCACAGCACCACGTAAACAAACATCCAGTACCGCAGGCTGACTCGGAAAT
>TU490703
TCATTACCAAGGTGTCACACAAGAAACATCTCATGATGGGTAAAAGCAAAGAGCTCTCTCAAGAACTTCGCAACCTTATTATTGCAAAACATACTGATGGCATTGGTTACAGAAGGATTTCAAAACTTCTGAATGTTCCAGTGAGCACTGTTGGGGCCATAATCCGGTAGTGGAAAGAACAACATTTCACCGTAACCCGGCCATGACCAGGTGCTCCTCGCAAGATTTCTGACAGAGGATTGAAAAGAATTATCAGAAGAGTTGTCCAAGAGCCAAGGACCACTTGTGGAGAGCTTCAGAAACACCTGGAATTAACAGGTACAATTGTTGACCAAAATTGAACTCTTTGGATGCCATAATACACACCATGTTTGGAGGACAAATGACACTGCACATCACCCCAAAAACACCATACCAACAGTGAAGTTTGGAGGTGGGAACATCATGgtgtggggctgtttttcagcaTTCTGTACTGGCAAACTTCATATAATTGAAGGAATGATGAATGGAAAAATGTACTGAGACATTCTTGATAAAAATCTGCTGCCATCTAccaggatgatgaagatgaaacgAGAGTGTAcatttcagcaagacaatgatcccaaacacacagccaagAAAACTCTCAGTTggtttcagaaaaagaaaataaagctgcAAGAATGGCCCAGCCAATCACCTGACTtgaatccaattgaaaatctaTGGAAAGAACTAAAGATCAGAGTTCACAGAAGAGGCCCATGGAACCTTCAAGATTTGAAGACTGTTTGTGTGGAAGAATGGGCCAAAATCACACCTGAGCAATGCATGCAACTAGTTTCTCCATACAGGAGGCGTCTTGAAGCTGTCATTACCAACAAAGGCTTTTGTACAAAGTAAATTTCAGAAGGTGCTTAGATGCTGTTGCTTTCCTCCAGAGAGCTAACTGCGTATTGTGCACCTCTACTGTGCTATGGAGCAACCAGCCTTCAGGtgaatgctgattggttggTGAATGCTGACTATATATGTTTTAACAAGCTCATTTAATGTAATTGGTATTTTGGACATGATCCCTTTTATTTGTTTCAGTTCATTTGTAAAGATTTCAATTGCAGCAATTGTGTCCTTTTGTCTTGATTTTCTGACACAACTTTAACTTCGCATTCCAGAAAATTCCTGTTTTGCTTTTCTTGTGGAGCCTTTTAAACACAGGTGTGTGCGTTTCTAAATCATACaatcagtttaatttttaacagGTGGATGCCAGTTAAGTTCTAGAGAAAACTCAAGATAATCAAAgcaggatgcacctgagctcagCCTGAAGTGCCTTTAgccaagggtctgaatacttctctaaatgagagattttagcttttaattttttttaataaatttggaaaaaaattctaaaaccatgtttttgctttgtcattatggattattaCGTGCAGATTAATGGCAAAGAAAGTcgatttaatccattttaaattaaatctataacaataaatgtgcaaaaactgaaCACTTTCATAATTCACAGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU490702 False 506 lncRNA 0.43 2 25443 30024
TU490703 True 1537 lncRNA 0.39 2 23875 26631

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_000090 CR855320.2 coding NC_007112.7 CM002885.2 7988052 ~ 7989314 (+)
grasscarp (Ctenopharyngodon idella) G520098 NA non-coding CI01000364 null 138455 ~ 221553 (-)
mexican tetra (Astyanax mexicanus) G268650 NA non-coding NW_019172027.1 APWO02001625.1 181826 ~ 182688 (+)