XLOC_000585



Basic Information


Item Value
gene id XLOC_000585
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 46307015 ~ 46307550 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00002870
GGAAAATCTCCTTATAGTTTCCACTATTGCTGGTTGCGTCCTGTGTCGGCTTTAGCACAGCTGACAGTGTCGCTCCATCTATGATCAGACCATAGTCCTGGTAATCACCGGAGAGCCTGTAGAAGCATGTACAAGTGTAAGAGTCTCAGTGTGTAAAACCAAAACTATTGgccaaaaacattttctttaactaaacaaaaaatgtaaaatttaattaacaacagtttactgaacaaattaaatgaaaaaaaataataataatagaaaataatattctCTTTTAACATTAATAAGCACTGATTCTGTGGTAGAAAACAGGGAAACATCTGTAGATTTATTTGTACAGACAAAATCATATTttctatataaacataaaacatttcttCAGTTGCCAAATAATGTAAATGAGGCATGTTTAACTACATACACAATCTTTAATATAAAGAAGTTTGTCTGAAGTCTTCACAATTCTTACTTTTATTTGCTCAAGCTGAATTTCTGTGGTGGTTTTGCGCTGCAAatcaaatgcttttctt

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00002870 True 536 lncRNA 0.32 1 46307015 46307550

Neighbor


gene id symbol gene type direction distance location
XLOC_000584 NA coding upstream 34689 46263451 ~ 46272326 (+)
XLOC_000583 NA coding upstream 55191 46249979 ~ 46251824 (+)
XLOC_000582 NA coding upstream 58424 46247618 ~ 46248591 (+)
XLOC_000581 NA coding upstream 87854 46217503 ~ 46219161 (+)
XLOC_000580 sox1b coding upstream 110908 46194333 ~ 46196107 (+)
XLOC_000586 BX465849.1 coding downstream 93062 46400612 ~ 46401636 (+)
XLOC_000587 tubgcp3 coding downstream 97418 46404968 ~ 46452686 (+)
XLOC_000588 mcf2la coding downstream 186394 46493944 ~ 46594288 (+)
XLOC_000589 cab39l coding downstream 290952 46598502 ~ 46617283 (+)
XLOC_000590 arl11 coding downstream 345065 46652615 ~ 46654528 (+)
XLOC_000579 NA non-coding upstream 153815 46032720 ~ 46153200 (+)
XLOC_000591 NA non-coding downstream 411546 46719096 ~ 46726957 (+)
XLOC_000592 NA non-coding downstream 428178 46735728 ~ 46736116 (+)
XLOC_000593 CU986305.1 non-coding downstream 520341 46827891 ~ 46845676 (+)
XLOC_000595 NA non-coding downstream 652352 46959902 ~ 46964228 (+)

Expression



Co-expression Network