AMCG00000041


Basic Information

Item Value
gene id AMCG00000041
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 729902 ~ 743938 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000041
ATGGATGAAACAATGGATGAAGCCGCAGCAGGTCCATCCCGGGAATGTGCCAACCCATGGCCCCACCTCGCCAGACTATTTCAATTTTCTGAACAAGTTAATAATAGTTTTCGCTTCAAGTGTTTGCTGTGTTTACCAAAACAGAACTTCATCACCGCCTACAAAAATTCATCCTCCAACTTGCGGAAGCATGTCAAGAGAGGGCATGAGACACATCTGGAGGAATACTGTCAACTGACTTCAACAGCCTGCAAGAGGCCATCAGAAGGTGGAACAGGCTTCAAGGCAAAGAAACTGAAGCTGCTGGAGACCAAGCAGGTGTCTCAGAAAACGGTTGATCGGGCTATCCTCCGCTTCATCATTCAAGTCATTCACTGCCAGccaggctggctggctggctggctggctggctggctagATGGGGAGAATGCTTGCAGCTGCTCCTGCGTACCTTACCAAGCTTATTTAATTGACTGCCGCTCCTACTCCGCCCGCATGCCCACCTATGCCCGATCTGCTGTTCACCTGGATCACAGCTCCGCCCCAACAGGGCAGAGCCTCCCAAAAAATGGTACAAACtcgggagggagggagggagggagggagggggagagagagagagagagagagagagagagtcactgA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000041 True 645 mRNA 0.52 3 729902 743938

Neighbor

gene id symbol gene type direction distance location
AMCG00000040 NA coding upstream 160198 501495 ~ 569704 (+)
AMCG00000039 NA coding upstream 301076 428554 ~ 428826 (+)
AMCG00000038 LOC102299462,LOC102207316,LOC108269999,LOC100697238 coding upstream 310997 392178 ~ 418905 (+)
AMCG00000034 NA coding upstream 393485 317564 ~ 336417 (+)
AMCG00000035 NA coding upstream 413422 256457 ~ 316480 (+)
AMCG00000044 NA coding downstream 405 744343 ~ 787026 (+)
AMCG00000047 NA coding downstream 43146 787084 ~ 787849 (+)
AMCG00000048 NA coding downstream 72003 815941 ~ 816517 (+)
AMCG00000051 NA coding downstream 142462 886400 ~ 886792 (+)
AMCG00000049 NA coding downstream 142968 886906 ~ 898545 (+)
G147314 NA non-coding upstream 244441 482114 ~ 485461 (+)
G147313 NA non-coding upstream 256395 470695 ~ 473507 (+)
G147292 NA non-coding upstream 342949 386290 ~ 386953 (+)
G147288 NA non-coding upstream 372914 356772 ~ 356988 (+)
G147286 NA non-coding upstream 390388 337466 ~ 339514 (+)
G147380 NA non-coding downstream 84517 828455 ~ 1174302 (+)
G147393 NA non-coding downstream 161032 904970 ~ 1069770 (+)
G147405 NA non-coding downstream 196920 940858 ~ 941911 (+)
G147466 NA non-coding downstream 444870 1188808 ~ 1189042 (+)
G147551 NA non-coding downstream 745642 1489580 ~ 1492313 (+)
G147311 NA other upstream 231391 449652 ~ 498511 (+)
AMCG00000032 NA other upstream 475461 231336 ~ 254441 (+)
AMCG00000025 NA other upstream 625540 55439 ~ 104362 (+)
AMCG00000026 NA other upstream 692127 28694 ~ 37775 (+)
G147416 NA other downstream 319147 1063085 ~ 1116950 (+)
AMCG00000073 mta1,LOC107679789,LOC107666257,LOC107600838 other downstream 1292085 2036023 ~ 2058770 (+)
G147726 LOC104962440 other downstream 1659792 2403730 ~ 2403972 (+)
AMCG00000094 NA other downstream 2946834 3690772 ~ 3699093 (+)
AMCG00000093 srp14,LOC106610862 other downstream 2977047 3720985 ~ 3724316 (+)

Expression


Co-expression Network