AMCG00000048


Basic Information

Item Value
gene id AMCG00000048
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 815941 ~ 816517 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000048
ATGTGTCTGGTGCGGGGCCTTGCTGTAGGCAAGACTGCCCAGGTGACCTTTGATAGTCAACTGGTGCTCTATGGAGCTCATCTACACCGCACATGCTGGTGGCCTCTGTGGCTTATGTTGTACTGTTTTCTAGAGGCTCTGTGGTGCGCCCGGACCCTCTTGGTGCGCAAAGGCTATCTCTGCAGGCCATGGCACATCTTGGCATGTCTTTCCTGTGGGATTACATCCACCAAGATTACAAGAACCTTGGTGCTGCGGATATGCAGCGGATCTGGCATTTGGCAGCATGGCCGGGACAGATGGCCTGGGTTGATGGCGTTGGCTGATGGGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000048 True 333 mRNA 0.55 2 815941 816517

Neighbor

gene id symbol gene type direction distance location
AMCG00000047 NA coding upstream 28092 787084 ~ 787849 (+)
AMCG00000044 NA coding upstream 28915 744343 ~ 787026 (+)
AMCG00000041 NA coding upstream 72003 729902 ~ 743938 (+)
AMCG00000040 NA coding upstream 246237 501495 ~ 569704 (+)
AMCG00000039 NA coding upstream 387115 428554 ~ 428826 (+)
AMCG00000051 NA coding downstream 69883 886400 ~ 886792 (+)
AMCG00000049 NA coding downstream 70389 886906 ~ 898545 (+)
AMCG00000052 NA coding downstream 141189 957706 ~ 978544 (+)
AMCG00000053 vps39 coding downstream 174523 991040 ~ 1042603 (+)
AMCG00000054 NA coding downstream 322526 1139043 ~ 1164404 (+)
G147314 NA non-coding upstream 330480 482114 ~ 485461 (+)
G147313 NA non-coding upstream 342434 470695 ~ 473507 (+)
G147292 NA non-coding upstream 428988 386290 ~ 386953 (+)
G147288 NA non-coding upstream 458953 356772 ~ 356988 (+)
G147286 NA non-coding upstream 476427 337466 ~ 339514 (+)
G147380 NA non-coding downstream 11938 828455 ~ 1174302 (+)
G147393 NA non-coding downstream 88453 904970 ~ 1069770 (+)
G147405 NA non-coding downstream 124341 940858 ~ 941911 (+)
G147466 NA non-coding downstream 372291 1188808 ~ 1189042 (+)
G147551 NA non-coding downstream 673063 1489580 ~ 1492313 (+)
G147311 NA other upstream 317430 449652 ~ 498511 (+)
AMCG00000032 NA other upstream 561500 231336 ~ 254441 (+)
AMCG00000025 NA other upstream 711579 55439 ~ 104362 (+)
AMCG00000026 NA other upstream 778166 28694 ~ 37775 (+)
G147416 NA other downstream 246568 1063085 ~ 1116950 (+)
AMCG00000073 mta1,LOC107679789,LOC107666257,LOC107600838 other downstream 1219506 2036023 ~ 2058770 (+)
G147726 LOC104962440 other downstream 1587213 2403730 ~ 2403972 (+)
AMCG00000094 NA other downstream 2874255 3690772 ~ 3699093 (+)
AMCG00000093 srp14,LOC106610862 other downstream 2904468 3720985 ~ 3724316 (+)

Expression


Co-expression Network